Module 333 Residual: 0.56
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.56 | 0.0000000078 | 0.00000000038 | 81 | 23 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.0000000078 | |
| Motif 2 |
 |
| e-value: 0.00000000038 |
| MSMEG_1185 Transcriptional regulator, AsnC family protein | MSMEG_1838 Cationic amino acid transporter |
| MSMEG_1186 Putative permease | MSMEG_1837 Secreted protein |
| MSMEG_1187 D-aminoacylase (EC 3.5.1.-) (N-acyl-D-aspartate deacylase) (EC 3.5.1.83) | MSMEG_1138 Alcohol dehydrogenase (Alcohol dehydrogenase 1) (EC 1.1.1.1) |
| MSMEG_5184 Alpha-methylacyl-CoA racemase Mcr (EC 5.1.99.4) (Alpha-methylacyl-CoA racemase, putative) | MSMEG_2767 Uncharacterized protein |
| MSMEG_5182 2-Nitropropane dioxygenase (2-nitropropane dioxygenase NPD) (EC 1.13.12.16) | MSMEG_0222 Uncharacterized protein |
| MSMEG_5183 3-Hydroxyacyl-CoA dehydrogenase (Short-chain dehydrogenase/reductase SDR) (EC 1.1.1.35) | MSMEG_0223 Uncharacterized protein |
| MSMEG_2675 ISMsm8, transposase (Integrase catalytic region) | MSMEG_0262 Uncharacterized protein |
| MSMEG_2770 Conserved integral membrane alanine and leucine rich protein (Probable conserved integral membrane alanine and leucine rich protein) | MSMEG_0263 Amidohydrolase 3 |
| MSMEG_4635 Ammonium transporter family protein (EC 2.3.3.9) | MSMEG_0261 P40 protein (p40 protein) |
| MSMEG_2092 D-aminopeptidase (Peptidase S58 DmpA (D-aminopeptidase)) (EC 3.4.11.19) | MSMEG_1139 Transcription regulator |
| MSMEG_4636 Uncharacterized protein | MSMEG_2768 Nucleic acid binding OB-fold tRNA/helicase-type (OB-fold nucleic acid binding domain protein) |
| MSMEG_4633 Peptidase S9, prolyl oligopeptidase (Peptidase S9, prolyl oligopeptidase active site region) |
Wild.type.rep1.y
Bedaquiline.vs..DMSO.30min
WT.vs..DamtR.without.N_rep1
WT.vs..DamtR.without.N_rep2
Wild.type.rep2.x
Mycobacterium.smegmatis.Spheroplast.induced
dosR.WT_Replicate4
Biological.replicate.5.of.6..isoniazid.treatment
Biological.replicate.4.of.6..isoniazid.treatment
dosR.WT_Replicate3
dosR.WT_Replicate2
KO_log.phase_rep2
DglnR_without.vs..with.N_rep1
Biological.replicate.7.of.7..falcarinol.treatment
DglnR_without.vs..with.N_rep2
MB100pruR.vs..MB100.rep.2
WT.vs..DamtR.without.N_.dyeswap_rep2
MB100pruR.vs..MB100.rep.1
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
Biological.replicate.3.of.7..falcarinol.treatment
Biological.replicate.6.of.6..negative.control
Biological.replicate.6.of.7..falcarinol.treatment
DamtR.with.vs..DamtR.without.N_.rep1
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.3.of.6..isoniazid.treatment
DamtR.with.vs..DamtR.without.N_.rep2
X3dbfcy5plogcy3slide601norm
Biological.replicate.6.of.7..ethambutol.treatment
WT.vs..DamtR.N.surplus_rep1
mc2155.vs.Dcrp1.replicate.2
mc2155.vs.Dcrp1.replicate.3
mc2155.vs.Dcrp1.replicate.1
X3dbfcy3plogcy5slide607norm
mc2155.vs.Dcrp1.replicate.4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
Biological.replicate.5.of.7..panaxydol.treatment
dcpA.knockout.rep1
Plogcy5plogcy3slide111norm
X2.5..vs..50..air.saturation.Replicate.4
X2.5..vs..50..air.saturation.Replicate.5
stphcy3plogcy5slide581norm
Biological.replicate.4.of.7..panaxydol.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
X2.5..vs..50..air.saturation.Replicate.2
X2.5..vs..50..air.saturation.Replicate.3
Biological.replicate.2.of.6..negative.control
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Slow.vs..Fast.Replicate.5
Bedaquiline.vs..DMSO.60min
Biological.replicate.4.of.7..falcarinol.treatment
Slow.vs..Fast.Replicate.1
Slow.vs..Fast.Replicate.2
Biological.replicate.7.of.7..panaxydol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
Biological.replicate.5.of.6..negative.control
X4dbfcy5plogcy3slide480norm
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
X4dbfcy5plogcy3slide901norm
WT.vs..DamtR.N.surplus_dyeswap_rep2
WT.with.vs..without.N_rep2
Biological.replicate.1.of.7..panaxydol.treatment
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
DglnR_without.vs..with.N_dyeswap_rep2
X2XR.rep1
X2XR.rep2
DglnR_without.vs..with.N_dyeswap_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
WT.vs..DglnR.N_starvation_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
BatchCulture_LBTbroth_StationaryPhase_Replicate3
BatchCulture_LBTbroth_StationaryPhase_Replicate1
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
Biological.replicate.3.of.6..negative.control
Biological.replicate.6.of.7..panaxydol.treatment
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