Module 345 Residual: 0.55
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.55 | 7.9e-17 | 0.000000000027 | 85 | 20 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 7.9e-17 | |
| Motif 2 |
 |
| e-value: 0.000000000027 |
| MSMEG_6188 Putative membrane protein (Uncharacterized protein) | MSMEG_3492 Phosphodiesterase (Type I phosphodiesterase/nucleotide pyrophosphatase) |
| MSMEG_0889 Aldehyde dehydrogenase | MSMEG_3930 [NiFe] hydrogenase, gamma subunit, putative |
| MSMEG_5867 Nuclear transport factor 2 (Nuclear transport factor 2 (NTF2) domain superfamily protein) | MSMEG_6660 Permease, cytosine/purines, uracil, thiamine, allantoin family protein |
| MSMEG_5866 Alcohol dehydrogenase B (Zinc-containing alcohol dehydrogenase NAD dependent adhB) (EC 1.1.1.1) | MSMEG_3377 Uncharacterized protein |
| MSMEG_3848 Carboxylic ester hydrolase (EC 3.1.1.-) | MSMEG_6658 Alpha/beta hydrolase (Alpha/beta hydrolase fold) |
| MSMEG_3851 LppI (LppI protein) | MSMEG_2864 Conserved hypothetical membrane protein (Uncharacterized protein) |
| MSMEG_5869 Putative short chain dehydrogenase (Short-chain dehydrogenase/reductase SDR) | MSMEG_2865 Twin-arginine translocation pathway signal (Uncharacterized protein) |
| MSMEG_6187 Endonuclease III (EC 4.2.99.18) (DNA-(apurinic or apyrimidinic site) lyase) | MSMEG_2989 LacI family protein transcriptional regulator (LacI family transcriptional regulator) |
| MSMEG_3781 Uncharacterized protein | MSMEG_2988 Carbon-nitrogen hydrolase family protein (Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase) |
| MSMEG_3932 14 kDa antigen (Heat shock protein hspX) | MSMEG_3491 Uncharacterized protein |
Wild.type.rep1.y
KO_stationary.phase_rep1
KO_stationary.phase_rep2
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
dcpA.knockout.rep2
M..smegmatis.Acid.NO.treated
Biological.replicate.4.of.6..isoniazid.treatment
Wild.type.rep2.x
Biological.replicate.5.of.6..isoniazid.treatment
Bedaquiline.vs..DMSO.30min
Biological.replicate.3.of.7..ethambutol.treatment
MB100pruR.vs..MB100..rep.3
Tet.CarD.vs.Control..Replicates.1..2..and.3.
dosR.WT_Replicate1
Biological.replicate.5.of.6..negative.control
KO_log.phase_rep2
KO_log.phase_rep1
Plogcy5plogcy3slide110norm
Wild.type.rep1.x
Biological.replicate.7.of.7..falcarinol.treatment
Biological.replicate.3.of.7..panaxydol.treatment
MB100pruR.vs..MB100.rep.2
WT.vs..DamtR.without.N_.dyeswap_rep1
WT.vs..DamtR.without.N_.dyeswap_rep2
MB100pruR.vs..MB100.rep.1
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep2
rel.knockout.rep1
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.6.of.6..negative.control
Biological.replicate.6.of.7..falcarinol.treatment
WT.vs..DamtR.without.N_rep2
DamtR.with.vs..DamtR.without.N_.rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
DamtR.with.vs..DamtR.without.N_.rep2
X3dbfcy5plogcy3slide601norm
Biological.replicate.4.of.7..falcarinol.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
X0.6..vs..50..air.saturation.Replicate.4
WT.vs..DamtR.N.surplus_rep1
stphcy5plogcy3slide487norm
Wild.type.rep2.y
Biological.replicate.1.of.6..kanamycin.treatment
X3dbfcy3plogcy5slide607norm
Bedaquiline.vs..DMSO.15min
Biological.replicate.3.of.6..negative.control
Biological.replicate.5.of.7..panaxydol.treatment
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Biological.replicate.2.of.6..isoniazid.treatment
Biological.replicate.2.of.7..falcarinol.treatment
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
X2.5..vs..50..air.saturation.Replicate.4
X2.5..vs..50..air.saturation.Replicate.5
stphcy3plogcy5slide581norm
Biological.replicate.4.of.7..panaxydol.treatment
X4dbfcy5plogcy3slide480norm
WT_stationary.phase_rep2
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Biological.replicate.2.of.7..ethambutol.treatment
mc2155.vs.Dcrp1.replicate.3
Biological.replicate.5.of.7..ethambutol.treatment
Slow.vs..Fast.Replicate.4
Slow.vs..Fast.Replicate.5
Biological.replicate.2.of.6..kanamycin.treatment
Biological.replicate.6.of.7..ethambutol.treatment
Biological.replicate.3.of.7..falcarinol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
X3dbfcy5plogcy3slide603norm
X4dbfcy5plogcy3slide901norm
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.vs..DglnR.N_starvation_dye.swap_rep2
Biological.replicate.1.of.6..negative.control
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
BatchCulture_LBTbroth_StationaryPhase_Replicate4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate1
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
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