Module 346 Residual: 0.55
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.55 | 1.5e-19 | 0.00000000000073 | 83 | 17 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 1.5e-19 | |
| Motif 2 |
 |
| e-value: 0.00000000000073 |
| MSMEG_6233 Uncharacterized protein | MSMEG_6501 Uncharacterized protein |
| MSMEG_3896 Prokaryotic ubiquitin-like protein Pup (Bacterial ubiquitin-like modifier) | MSMEG_6500 Uncharacterized protein |
| MSMEG_0419 Integral membrane protein (Succinate dehydrogenase (Membrane anchor subunit)) | MSMEG_4713 HpcH/HpaI aldolase/citrate lyase family protein (Putative citrate lyase (Beta subunit)) (EC 4.1.3.6) |
| MSMEG_6234 CBS domain pair protein | MSMEG_0417 Putative succinate dehydrogenase iron-sulfur subunit (EC 1.3.-.-) (Succinate dehydrogenase) |
| MSMEG_4824 Uncharacterized protein | MSMEG_4716 Acetyl-/propionyl-coenzyme A carboxylase alpha chain (EC 6.3.4.14) |
| MSMEG_4822 4Fe-4S ferredoxin, iron-sulfur binding protein (Conserved domain protein) | MSMEG_4717 Acetyl-/propionyl-CoA carboxylase (Beta subunit) AccD1 (EC 6.4.1.3) (Carboxyl transferase domain protein) |
| MSMEG_0418 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) (Succinate dehydrogenase subunit A) (EC 1.3.-.-) | MSMEG_4714 MoaC domain protein |
| MSMEG_4718 Transcriptional regulator, TetR family protein | MSMEG_4715 Acyl-CoA dehydrogenase (EC 1.3.99.-) (Acyl-CoA dehydrogenase FadE19) (EC 1.3.8.1) |
| MSMEG_4823 Cytochrome p450 |
Wild.type.rep2.x
KO_stationary.phase_rep1
Biological.replicate.4.of.6..isoniazid.treatment
Biological.replicate.5.of.7..falcarinol.treatment
Wild.type.rep2.y
WT.vs..DamtR.without.N_rep2
M..smegmatis.Acid.NO.treated
Biological.replicate.4.of.6..negative.control
dosR.WT_Replicate4
Biological.replicate.4.of.7..ethambutol.treatment
Biological.replicate.2.of.7..panaxydol.treatment
Biological.replicate.1.of.6..negative.control
dosR.WT_Replicate3
Tet.CarD.vs.Control..Replicates.1..2..and.3.
KO_log.phase_rep2
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Biological.replicate.7.of.7..falcarinol.treatment
Wild.type.rep1.x
Wild.type.rep1.y
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.6.of.7..ethambutol.treatment
WT.vs..DamtR.without.N_.dyeswap_rep1
WT.vs..DamtR.without.N_.dyeswap_rep2
MB100pruR.vs..MB100.rep.1
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.3.of.7..falcarinol.treatment
Biological.replicate.6.of.7..panaxydol.treatment
Bedaquiline.vs..DMSO.15min
DamtR.with.vs..DamtR.without.N_.rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
X0.6..vs..50..air.saturation.Replicate.1
WT_log.phase_rep2
Sub.MIC.INH
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.2.of.7..falcarinol.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
mc2155.vs.Dcrp1.replicate.2
Plogcy5plogcy3slide113norm
Biological.replicate.7.of.7..panaxydol.treatment
Biological.replicate.1.of.7..panaxydol.treatment
mc2155.vs.Dcrp1.replicate.4
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
X3dbfcy5plogcy3slide601norm
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
X3dbfcy3plogcy5slide607norm
WT.with.vs..without.N_dye.swap_rep1
X2.5..vs..50..air.saturation.Replicate.1
X2.5..vs..50..air.saturation.Replicate.2
X2.5..vs..50..air.saturation.Replicate.3
WT_stationary.phase_rep2
WT_stationary.phase_rep1
Biological.replicate.6.of.6..isoniazid.treatment
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
Biological.replicate.2.of.6..isoniazid.treatment
Slow.vs..Fast.Replicate.4
Slow.vs..Fast.Replicate.5
WT.with.vs..without.N_dye.swap_rep2
Biological.replicate.4.of.7..falcarinol.treatment
Slow.vs..Fast.Replicate.1
Slow.vs..Fast.Replicate.2
Slow.vs..Fast.Replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
X4dbfcy5plogcy3slide480norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
X4dbfcy5plogcy3slide901norm
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.with.vs..without.N_rep2
Biological.replicate.3.of.6..kanamycin.treatment
DglnR_without.vs..with.N_dyeswap_rep2
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
DglnR_without.vs..with.N_dyeswap_rep1
WT.vs..DglnR.N_starvation_rep1
BatchCulture_LBTbroth_StationaryPhase_Replicate4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate2
BatchCulture_LBTbroth_StationaryPhase_Replicate3
Biological.replicate.2.of.6..negative.control
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
stphcy5plogcy3slide487norm
X4dbfcy3plogcy5slide903norm
Biological.replicate.6.of.7..falcarinol.treatment
Comments
Log in to post comments