Module 357 Residual: 0.58
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.58 | 0.0000004 | 110 | 76 | 30 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.0000004 | |
| Motif 2 |
 |
| e-value: 110 |
| MSMEG_6717 Oxidoreductase, Gfo/Idh/MocA family protein | MSMEG_6907 MmcI protein |
| MSMEG_1953 Transcriptional regulator WhiB7 | MSMEG_2567 Cyclohexanone monooxygenase (EC 1.14.13.22) (Probable monooxygenase) (EC 1.14.13.-) |
| MSMEG_5632 Oxidoreductase, short chain dehydrogenase/reductase family protein (Short-chain dehydrogenase/reductase SDR) | MSMEG_6474 Nucleoside-diphosphate-sugar epimerase |
| MSMEG_5633 AMP-dependent synthetase and ligase (EC 6.2.1.3) (Feruloyl-CoA synthetase) | MSMEG_2565 4-hydroxy-2-oxovalerate aldolase (EC 4.1.2.-) (HpcH/HpaI aldolase) (EC 4.1.2.20) |
| MSMEG_5630 Transcriptional regulator, GntR family protein (Transcriptional regulatory protein (Probably GntR-family)) | MSMEG_2564 Alcohol dehydrogenase, zinc-binding protein (Oxidoreductase, zinc-binding dehydrogenase family protein) |
| MSMEG_5631 AMP-dependent synthetase and ligase (EC 6.2.1.26) | MSMEG_2563 Cytochrome P450 superfamily protein |
| MSMEG_3423 IclR family transcriptional regulator (Probable IclR family protein regulator) | MSMEG_0934 Uncharacterized protein |
| MSMEG_3379 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125) (Short-chain dehydrogenase/reductase SDR) (EC 1.1.1.-) | MSMEG_2783 Uncharacterized protein |
| MSMEG_0470 Carboxylic ester hydrolase (EC 3.1.1.-) | MSMEG_0344 Uncharacterized protein |
| MSMEG_4974 Rrf2 family protein (Putative transcriptional regulator) (Transcriptional regulator, BadM/Rrf2 family) | MSMEG_2568 Alpha/beta hydrolase fold-3 (LipW protein) |
| MSMEG_2973 Peptidyl-prolyl cis-trans isomerase | MSMEG_0932 ROK family protein |
| MSMEG_0933 D-inositol 3-phosphate glycosyltransferase (EC 2.4.1.250) (N-acetylglucosamine-inositol-phosphate N-acetylglucosaminyltransferase) (GlcNAc-Ins-P N-acetylglucosaminyltransferase) | MSMEG_1119 Glutamine amidotransferase, class I (Peptidase C26) (EC 4.1.3.27) |
| MSMEG_2906 Uncharacterized protein | MSMEG_2566 3-alpha-(Or 20-beta)-hydroxysteroid dehydrogenase (EC 1.1.1.53) |
| MSMEG_3805 Oxidoreductase, short chain dehydrogenase/reductase family protein | MSMEG_0930 Serine 3-dehydrogenase (EC 1.1.1.276) (Short-chain dehydrogenase/reductase SDR) |
| MSMEG_5215 Uncharacterized protein | MSMEG_1794 Dehydrogenase |
KO_stationary.phase_rep1
KO_stationary.phase_rep2
WT.vs..DamtR.without.N_rep1
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
dcpA.knockout.rep2
Biological.replicate.2.of.6..isoniazid.treatment
Biological.replicate.3.of.7..falcarinol.treatment
Biological.replicate.1.of.6..negative.control
Wild.type.rep3
KO_log.phase_rep2
KO_log.phase_rep1
Biological.replicate.7.of.7..falcarinol.treatment
Wild.type.rep1.x
Wild.type.rep1.y
MB100pruR.vs..MB100.rep.4
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.6.of.6..negative.control
Biological.replicate.2.of.7..panaxydol.treatment
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep2
rel.knockout.rep1
MB100pruR.vs..MB100.rep.2
Biological.replicate.6.of.7..falcarinol.treatment
WT.vs..DamtR.without.N_rep2
M..smegmatis.Acid.NO.treated
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.3.of.6..isoniazid.treatment
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
WT.vs..DglnR.N_starvation_dye.swap_rep2
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
mc2155.vs.Dcrp1.replicate.2
stphcy5plogcy3slide487norm
mc2155.vs.Dcrp1.replicate.1
mc2155.vs.Dcrp1.replicate.4
Biological.replicate.3.of.6..negative.control
Biological.replicate.5.of.7..panaxydol.treatment
dcpA.knockout.rep1
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
WT_log.phase_rep2
WT.with.vs..without.N_dye.swap_rep1
X3dbfcy3plogcy5slide607norm
DglnR_without.vs..with.N_rep1
X4dbfcy5plogcy3slide480norm
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
X2.5..vs..50..air.saturation.Replicate.1
Biological.replicate.2.of.6..negative.control
Biological.replicate.6.of.6..isoniazid.treatment
Biological.replicate.4.of.6..isoniazid.treatment
mc2155.vs.Dcrp1.replicate.3
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Biological.replicate.6.of.7..ethambutol.treatment
Biological.replicate.7.of.7..panaxydol.treatment
X3dbfcy5plogcy3slide603norm
Biological.replicate.5.of.6..kanamycin.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
X4dbfcy5plogcy3slide901norm
WT.vs..DamtR.N.surplus_.dyeswap_rep1
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
Biological.replicate.5.of.7..falcarinol.treatment
DglnR_without.vs..with.N_dyeswap_rep2
X2XR.rep1
X2XR.rep2
DglnR_without.vs..with.N_dyeswap_rep1
BatchCulture_LBTbroth_StationaryPhase_Replicate4
Sub.MIC.INH
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
Biological.replicate.4.of.6..kanamycin.treatment
Bedaquiline.vs..DMSO.120min
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