Module 387 Residual: 0.53
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.53 | 0.05 | 0.71 | 85 | 19 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.05 | |
| Motif 2 |
 |
| e-value: 0.71 |
| MSMEG_1575 Alanine racemase (EC 5.1.1.1) | MSMEG_1578 Peptidase M22, glycoprotease |
| MSMEG_1577 Uncharacterized protein | MSMEG_1906 Short-chain dehydrogenase/reductase SDR (EC 1.3.1.25) (Toluate 1,2-dioxygenase electron transfer component) (EC 1.18.1.3) |
| MSMEG_1576 Alpha/beta hydrolase fold | MSMEG_2329 |
| MSMEG_1912 Muconolactone Delta-isomerase (MIase) (EC 5.3.3.4) | MSMEG_2328 |
| MSMEG_1911 Catechol 1,2-dioxygenase (EC 1.13.11.1) (Chlorocatechol 1,2-dioxygenase) (EC 1.13.11.1) | MSMEG_1580 tRNA N6-adenosine threonylcarbamoyltransferase (EC 2.3.1.234) (N6-L-threonylcarbamoyladenine synthase) (t(6)A synthase) (t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD) (tRNA threonylcarbamoyladenosine biosynthesis protein TsaD) |
| MSMEG_1910 Mandelate racemase/muconate lactonizing protein (EC 5.5.1.1) (Muconate cycloisomerase) | MSMEG_2327 |
| MSMEG_1908 Benzoate 1,2-dioxygenase alpha subunit (Rieske (2Fe-2S) domain protein (Benzoate 1,2-dioxygenase alpha subunit)) (EC 1.14.12.10) | MSMEG_2326 |
| MSMEG_1909 LysR-type transcriptional regulator (Putative HTH-type transcriptional regulator YnfL) | MSMEG_2330 |
| MSMEG_1907 2-chlorobenzoate 1,2-dioxygenase (EC 1.14.12.-) (Toluate 1,2-dioxygenase beta subunit) | MSMEG_1581 Uncharacterized protein |
| MSMEG_1579 Ribosomal-protein-alanine acetyltransferase (EC 2.3.1.128) (Ribosomal-protein-alanine acetyltransferase RimI) |
Wild.type.rep2.x
KO_stationary.phase_rep1
WT.vs..DglnR.N_starvation_rep2
WT.vs..DamtR.without.N_rep1
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Bedaquiline.vs..DMSO.15min
Biological.replicate.4.of.6..negative.control
Plogcy5plogcy3slide110norm
Biological.replicate.3.of.7..ethambutol.treatment
MB100pruR.vs..MB100..rep.3
Biological.replicate.2.of.6..negative.control
Biological.replicate.5.of.6..negative.control
Biological.replicate.2.of.6..kanamycin.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
DglnR_without.vs..with.N_rep1
Biological.replicate.7.of.7..falcarinol.treatment
DglnR_without.vs..with.N_rep2
MB100pruR.vs..MB100.rep.1
mc2155.vs.Dcrp1.replicate.3
Biological.replicate.1.of.7..ethambutol.treatment
WT.with.vs..without.N_dye.swap_rep1
Biological.replicate.3.of.6..kanamycin.treatment
X4XR.rep1
dosR.WT_Replicate4
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.6.of.7..panaxydol.treatment
DamtR.with.vs..DamtR.without.N_.rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
Biological.replicate.3.of.6..isoniazid.treatment
DamtR.with.vs..DamtR.without.N_.rep2
WT_log.phase_rep2
X0.6..vs..50..air.saturation.Replicate.3
Biological.replicate.4.of.6..kanamycin.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
X0.6..vs..50..air.saturation.Replicate.4
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
Biological.replicate.1.of.6..kanamycin.treatment
mc2155.vs.Dcrp1.replicate.2
Plogcy5plogcy3slide113norm
Wild.type.rep2.y
mc2155.vs.Dcrp1.replicate.1
stphcy3plogcy5slide581norm
WT.vs..DamtR.N.surplus_rep2
Biological.replicate.5.of.7..panaxydol.treatment
Biological.replicate.2.of.6..isoniazid.treatment
stphcy5plogcy3slide580norm
X2.5..vs..50..air.saturation.Replicate.4
X2.5..vs..50..air.saturation.Replicate.5
X3dbfcy3plogcy5slide607norm
Biological.replicate.4.of.7..panaxydol.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
X2.5..vs..50..air.saturation.Replicate.2
WT.with.vs..without.N_dye.swap_rep2
WT_stationary.phase_rep2
WT_stationary.phase_rep1
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
stphcy5plogcy3slide487norm
Tet.CarD.vs.Control..Replicates.1..2..and.3.
dosR.WT_Replicate3
Biological.replicate.5.of.6..isoniazid.treatment
Slow.vs..Fast.Replicate.1
Biological.replicate.6.of.7..ethambutol.treatment
Biological.replicate.7.of.7..panaxydol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
X4dbfcy5plogcy3slide480norm
Biological.replicate.5.of.6..kanamycin.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
X4dbfcy5plogcy3slide901norm
WT.with.vs..without.N_rep2
WT.with.vs..without.N_rep1
WT.vs..DglnR.N_starvation_dye.swap_rep2
DglnR_without.vs..with.N_dyeswap_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
WT.vs..DglnR.N_starvation_rep1
BatchCulture_LBTbroth_StationaryPhase_Replicate4
Sub.MIC.INH
BatchCulture_LBTbroth_StationaryPhase_Replicate2
BatchCulture_LBTbroth_StationaryPhase_Replicate3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
Biological.replicate.4.of.6..isoniazid.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
Biological.replicate.3.of.6..negative.control
X4dbfcy3plogcy5slide903norm
Biological.replicate.5.of.7..falcarinol.treatment
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