Module 392 Residual: 0.55
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.55 | 6.6e-17 | 0.0026 | 79 | 31 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 6.6e-17 | |
| Motif 2 |
 |
| e-value: 0.0026 |
| MSMEG_4374 Agmatinase (EC 3.5.3.11) | MSMEG_2862 Uncharacterized protein |
| MSMEG_4373 Polysaccharide deacetylase (Polysaccharide deacetylase, putative) | MSMEG_2863 Conserved hypothetical secreted protein (Uncharacterized protein) |
| MSMEG_5839 Protease 2 (EC 3.4.21.83) (Protease II (Oligopeptidase B), PtrB) (EC 3.4.21.83) | MSMEG_2861 Uncharacterized protein |
| MSMEG_1847 4Fe-4S ferredoxin, iron-sulfur binding protein (EC 1.2.1.2) | MSMEG_4584 Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) |
| MSMEG_1846 Polysulphide reductase, NrfD | MSMEG_3067 Bifunctional riboflavin biosynthesis protein ribG : diaminohydroxyphosphoribosylaminopyrimidine deaminase + 5-amino-6-(5-phosphoribosylamino) uracil reductase (Riboflavin biosynthesis protein RibD) (EC 1.1.1.193) (EC 3.5.4.26) |
| MSMEG_2065 YceI like family (YceI like family protein) | MSMEG_5588 Uncharacterized protein |
| MSMEG_2697 Conserved hypothetical membrane protein (Uncharacterized protein) | MSMEG_5358 Acetamidase/Formamidase family protein |
| MSMEG_6054 UPF0271 protein MSMEG_6054 | MSMEG_0529 Probable serine/threonine-protein kinase PknK (EC 2.7.11.1) (Serine/threonine-protein kinase transcriptional regulatory protein PknK) |
| MSMEG_2699 Putative alanine rich transferase (Uncharacterized protein) | MSMEG_1942 Integral membrane protein (Putative membrane protein) |
| MSMEG_2698 Uncharacterized protein | MSMEG_6550 Uncharacterized protein |
| MSMEG_1749 Luciferase-like protein (EC 1.14.14.5) (Putative monooxygenase) | MSMEG_1199 Conserved integral membrane protein (Uncharacterized protein) |
| MSMEG_2719 Hydrogen:quinone oxidoreductase (EC 1.12.5.1) | MSMEG_4585 Ribokinase (EC 2.7.1.15) (Ribokinase Rbsk) (EC 2.7.1.15) |
| MSMEG_1200 Extracellular solute-binding protein family 3 (Serine/threonine-protein kinase PknD) (EC 2.7.11.1) | MSMEG_5841 Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) (SAICAR synthetase) |
| MSMEG_2718 Iron-sulfur cluster-binding protein, Rieske family protein, putative | MSMEG_5842 Conserved transmembrane protein (Uncharacterized protein) |
| MSMEG_2650 Acyl-CoA dehydrogenase (Putative acyl-CoA dehydrogenase) | MSMEG_2720 NADH ubiquinone oxidoreductase 20 kDa subunit (EC 1.12.99.6) (NADH ubiquinone oxidoreductase, 20 kDa subunit) |
| MSMEG_2651 Alkanesulfonate monooxygenase family protein |
KO_stationary.phase_rep1
WT.vs..DglnR.N_starvation_rep2
WT.vs..DamtR.without.N_rep1
Wild.type.rep2.y
Biological.replicate.4.of.6..negative.control
Mycobacterium.smegmatis.Spheroplast.induced
dosR.WT_Replicate4
Biological.replicate.3.of.7..falcarinol.treatment
MB100pruR.vs..MB100..rep.3
KO_log.phase_rep2
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
WT.vs..DamtR.N.surplus_dyeswap_rep2
Wild.type.rep1.x
DglnR_without.vs..with.N_rep1
MB100pruR.vs..MB100.rep.4
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.6.of.6..negative.control
DglnR_without.vs..with.N_rep2
Biological.replicate.2.of.7..panaxydol.treatment
MB100pruR.vs..MB100.rep.1
rel.knockout.rep2
Wild.type.rep3
Bedaquiline.vs..DMSO..45min
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.6.of.7..panaxydol.treatment
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
Biological.replicate.3.of.6..isoniazid.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
mc2155.vs.Dcrp1.replicate.3
Slow.vs..Fast.Replicate.3
Biological.replicate.1.of.7..panaxydol.treatment
mc2155.vs.Dcrp1.replicate.4
Biological.replicate.3.of.6..negative.control
dcpA.knockout.rep2
stphcy3plogcy5slide581norm
Biological.replicate.2.of.7..falcarinol.treatment
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
WT_log.phase_rep2
X2.5..vs..50..air.saturation.Replicate.5
X3dbfcy3plogcy5slide607norm
WT_log.phase_rep1
WT.with.vs..without.N_dye.swap_rep1
X2.5..vs..50..air.saturation.Replicate.1
Biological.replicate.5.of.6..isoniazid.treatment
X2.5..vs..50..air.saturation.Replicate.3
WT_stationary.phase_rep2
WT_stationary.phase_rep1
X4XR.rep2
X4XR.rep1
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
WT.with.vs..without.N_dye.swap_rep2
Biological.replicate.4.of.7..falcarinol.treatment
Slow.vs..Fast.Replicate.1
Biological.replicate.7.of.7..panaxydol.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
Biological.replicate.5.of.6..kanamycin.treatment
Biological.replicate.3.of.6..kanamycin.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
X4dbfcy5plogcy3slide901norm
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.with.vs..without.N_rep2
WT.with.vs..without.N_rep1
Wild.type.rep2.x
X2XR.rep1
X2XR.rep2
Biological.replicate.5.of.7..falcarinol.treatment
Wild.type.rep1.y
BatchCulture_LBTbroth_StationaryPhase_Replicate4
Sub.MIC.INH
Biological.replicate.4.of.6..kanamycin.treatment
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
Biological.replicate.2.of.6..negative.control
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
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