Module 402 Residual: 0.57
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.57 | 1.5e-16 | 0.000000067 | 80 | 23 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 1.5e-16 | |
| Motif 2 |
 |
| e-value: 0.000000067 |
| MSMEG_6714 Uncharacterized protein | MSMEG_0319 Acyltransferase |
| MSMEG_6715 AP endonuclease, family protein 2 (Xylose isomerase-like TIM barrel) | MSMEG_6039 3-ketosteroid-9-alpha-hydroxylase reductase subunit (EC 1.17.1.-) (Rieske-type oxygenase) (RO) |
| MSMEG_6716 AP endonuclease, family protein 2 (Xylose isomerase domain protein TIM barrel) | MSMEG_4891 Alkyl hydroperoxide reductase subunit C (EC 1.11.1.15) (Peroxiredoxin) (Thioredoxin peroxidase) |
| MSMEG_5892 Trehalose-phosphate synthase (TPS) (EC 2.4.1.-) (Trehalose-6-phosphate synthase) | MSMEG_4890 Alkyl hydroperoxide reductase AhpD (EC 1.11.1.15) (Alkylhydroperoxidase AhpD) |
| MSMEG_5890 Uncharacterized protein | MSMEG_4551 Monoxygenase (Xenobiotic compound monooxygenase, DszA family) |
| MSMEG_2235 Amidohydrolase 2 (Amidohydrolase family protein) | MSMEG_4552 Monooxygenase, NtaA/SnaA/SoxA family (Nitrilotriacetate monooxygenase component A) (EC 1.14.13.-) |
| MSMEG_6654 TnpC protein | MSMEG_4553 GAF domain, putative (Sensor protein) (EC 2.7.13.3) |
| MSMEG_2554 Aminoglycoside phosphotransferase (Phosphotransferase enzyme family protein) | MSMEG_5471 UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) |
| MSMEG_4921 Methylmalonyl CoA epimerase (EC 5.1.99.1) (Methylmalonyl-CoA epimerase) (EC 5.1.99.1) | MSMEG_5472 5-formyltetrahydrofolate cyclo-ligase (5-FCL) (EC 6.3.3.2) (5,10-methenyltetrahydrofolate synthetase) (MTHFS) |
| MSMEG_0317 Uncharacterized protein | MSMEG_5250 CalR9 protein |
| MSMEG_5931 Short chain dehydrogenase (Short-chain dehydrogenase/reductase SDR) | MSMEG_5252 Pantothenate kinase (EC 2.7.1.33) (Pantothenic acid kinase) |
| MSMEG_5930 Uncharacterized protein |
KO_stationary.phase_rep1
Biological.replicate.5.of.7..falcarinol.treatment
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
WT.vs..DamtR.without.N_rep2
Biological.replicate.2.of.6..isoniazid.treatment
Biological.replicate.5.of.6..isoniazid.treatment
dosR.WT_Replicate3
Tet.CarD.vs.Control..Replicates.1..2..and.3.
X2XR.rep2
KO_log.phase_rep1
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Wild.type.rep1.x
DglnR_without.vs..with.N_rep1
Biological.replicate.3.of.7..panaxydol.treatment
MB100pruR.vs..MB100.rep.2
WT.vs..DamtR.without.N_.dyeswap_rep1
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
Biological.replicate.3.of.7..falcarinol.treatment
rel.knockout.rep1
Bedaquiline.vs..DMSO..45min
Biological.replicate.6.of.6..negative.control
Biological.replicate.6.of.7..falcarinol.treatment
Bedaquiline.vs..DMSO.15min
M..smegmatis.Acid.NO.treated
Biological.replicate.4.of.6..isoniazid.treatment
Biological.replicate.4.of.6..kanamycin.treatment
DamtR.with.vs..DamtR.without.N_.rep2
X0.6..vs..50..air.saturation.Replicate.1
WT_log.phase_rep2
X0.6..vs..50..air.saturation.Replicate.5
WT.vs..DamtR.N.surplus_rep2
WT.vs..DamtR.N.surplus_rep1
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
mc2155.vs.Dcrp1.replicate.2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
Wild.type.rep2.y
mc2155.vs.Dcrp1.replicate.1
Biological.replicate.3.of.6..negative.control
dcpA.knockout.rep1
Biological.replicate.2.of.7..falcarinol.treatment
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
X2.5..vs..50..air.saturation.Replicate.4
X2.5..vs..50..air.saturation.Replicate.5
Biological.replicate.2.of.7..ethambutol.treatment
WT_log.phase_rep1
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.1
X2.5..vs..50..air.saturation.Replicate.2
X2.5..vs..50..air.saturation.Replicate.3
Biological.replicate.2.of.6..negative.control
WT_stationary.phase_rep1
mc2155.vs.Dcrp1.replicate.3
Slow.vs..Fast.Replicate.4
Slow.vs..Fast.Replicate.5
Bedaquiline.vs..DMSO.60min
Biological.replicate.2.of.6..kanamycin.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
Slow.vs..Fast.Replicate.2
Slow.vs..Fast.Replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
X3dbfcy5plogcy3slide603norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
WT.vs..DamtR.N.surplus_.dyeswap_rep1
Biological.replicate.3.of.6..kanamycin.treatment
X2XR.rep1
Biological.replicate.7.of.7..panaxydol.treatment
Wild.type.rep1.y
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
Sub.MIC.INH
BatchCulture_LBTbroth_StationaryPhase_Replicate3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
X4dbfcy3plogcy5slide903norm
Biological.replicate.6.of.7..panaxydol.treatment
Bedaquiline.vs..DMSO.120min
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