Module 411 Residual: 0.50
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.50 | 9.30042e-42 | 0.000000000003 | 83 | 16 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 9.30042e-42 | |
| Motif 2 |
 |
| e-value: 0.000000000003 |
| MSMEG_0667 Acyl-CoA dehydrogenase (EC 1.3.8.-) (Butyryl-CoA dehydrogenase) | MSMEG_6763 Alpha/beta hydrolase fold protein (EC 3.8.1.5) (Oxidoreductase) |
| MSMEG_0665 Oxidoreductase, FAD-binding protein (EC 1.4.3.19) (Sarcosine oxidase subunit beta, putative) | MSMEG_5283 Hydrolase, CocE/NonD family protein |
| MSMEG_0662 Polyamine-transporting ATPase (EC 3.6.3.31) | MSMEG_0119 Uncharacterized protein |
| MSMEG_6030 Cytochrome p450 | MSMEG_0659 Polyamine ABC transporter permease (Polyamine ABC transporter permease protein) |
| MSMEG_0660 Bacterial extracellular solute-binding protein | MSMEG_0658 Polyamine ABC-transporter, inner membrane subunit |
| MSMEG_0661 Glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8) | MSMEG_0121 Rhamnolipids biosynthesis 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100) (Short-chain dehydrogenase/reductase SDR) |
| MSMEG_6032 Transcriptional regulator, TetR family protein | MSMEG_0120 Probable transcriptional regulatory protein (Transcriptional regulatory protein (Possibly TetR-family)) |
| MSMEG_6764 Transcriptional regulator, TetR family (Transcriptional regulator, TetR family protein) | MSMEG_5282 TetR-family transcriptional regulator (Transcriptional regulator) |
KO_stationary.phase_rep1
KO_stationary.phase_rep2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
KO_log.phase_rep1
X4XR.rep1
WT.vs..DamtR.without.N_rep2
Mycobacterium.smegmatis.Spheroplast.induced
Wild.type.rep2.x
Biological.replicate.1.of.6..negative.control
MB100pruR.vs..MB100..rep.3
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Wild.type.rep2.y
Wild.type.rep1.y
Wild.type.rep1.x
DglnR_without.vs..with.N_rep1
MB100pruR.vs..MB100.rep.4
Biological.replicate.6.of.6..negative.control
DglnR_without.vs..with.N_rep2
WT.vs..DamtR.without.N_.dyeswap_rep2
MB100pruR.vs..MB100.rep.1
Biological.replicate.6.of.6..kanamycin.treatment
Biological.replicate.3.of.6..kanamycin.treatment
rel.knockout.rep1
Biological.replicate.1.of.7..falcarinol.treatment
Bedaquiline.vs..DMSO.15min
Biological.replicate.2.of.7..panaxydol.treatment
WT.vs..DamtR.without.N_.dyeswap_rep1
X0.6..vs..50..air.saturation.Replicate.1
X0.6..vs..50..air.saturation.Replicate.5
WT.vs..DglnR.N_starvation_dye.swap_rep2
mc2155.vs.Dcrp1.replicate.2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
Biological.replicate.7.of.7..panaxydol.treatment
Biological.replicate.1.of.7..panaxydol.treatment
mc2155.vs.Dcrp1.replicate.4
Biological.replicate.3.of.6..negative.control
Biological.replicate.5.of.7..panaxydol.treatment
dcpA.knockout.rep1
Plogcy5plogcy3slide111norm
X3dbfcy5plogcy3slide601norm
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
WT_log.phase_rep1
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.1
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
WT.with.vs..without.N_dye.swap_rep2
Biological.replicate.2.of.6..kanamycin.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
Biological.replicate.6.of.6..isoniazid.treatment
X4XR.rep2
Biological.replicate.4.of.6..isoniazid.treatment
Biological.replicate.5.of.7..ethambutol.treatment
Slow.vs..Fast.Replicate.4
Slow.vs..Fast.Replicate.5
dosR.WT_Replicate3
Bedaquiline.vs..DMSO.60min
Slow.vs..Fast.Replicate.1
Slow.vs..Fast.Replicate.2
Slow.vs..Fast.Replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
X3dbfcy5plogcy3slide603norm
mc2155.vs.Dcrp1.replicate.1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.vs..DglnR.N_starvation_rep1
X4dbfcy3plogcy5slide903norm
WT.with.vs..without.N_rep1
DglnR_without.vs..with.N_dyeswap_rep2
X2XR.rep1
X2XR.rep2
DglnR_without.vs..with.N_dyeswap_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
Sub.MIC.INH
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
BatchCulture_LBTbroth_StationaryPhase_Replicate1
dosR.WT_Replicate2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
Biological.replicate.1.of.6..kanamycin.treatment
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