Module 430 Residual: 0.53
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.53 | 0.0000000000056 | 0.017 | 76 | 30 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.0000000000056 | |
| Motif 2 |
 |
| e-value: 0.017 |
| MSMEG_3643 Uncharacterized protein | MSMEG_3797 Putative esterase family protein |
| MSMEG_3794 Uncharacterized protein | MSMEG_4825 TetR family regulatory protein (Transcriptional repressor, TetR family protein, putative) |
| MSMEG_5324 Ornithine-acylacyl carrier protein N-acyltransferase (Uncharacterized protein) | MSMEG_4826 Acyl-CoA dehydrogenase fadE1 (EC 1.3.99.-) (Putative acyl-CoA dehydrogenase) |
| MSMEG_5445 Ribosomal RNA small subunit methyltransferase I (EC 2.1.1.198) (16S rRNA 2'-O-ribose C1402 methyltransferase) (rRNA (cytidine-2'-O-)-methyltransferase RsmI) | MSMEG_4827 Aminoglycoside phosphotransferase |
| MSMEG_0808 Chalcone synthase pks10 (EC 2.3.1.74) (Possible chalcone synthase Pks10) | MSMEG_4828 Alcohol dehydrogenase, zinc-binding (Alcohol dehydrogenase, zinc-binding protein) (EC 1.6.5.5) |
| MSMEG_0579 Helix-turn-helix, Fis-type (Purine catabolism PurC-like protein) | MSMEG_1739 Enoyl-CoA hydratase/isomerase family protein |
| MSMEG_5871 HIT family protein | MSMEG_6228 Uncharacterized protein |
| MSMEG_6334 ABC transporter, quaternary amine uptake transporter (QAT) family protein, substrate-binding protein (Substrate-binding region of ABC-type glycine betaine transport system) | MSMEG_4987 Glycosyl transferase (Glycosyltransferase) (EC 2.4.1.117) |
| MSMEG_6335 Uncharacterized protein | MSMEG_2030 TetR family regulatory protein (Transcriptional regulator, TetR family protein) |
| MSMEG_3719 Sodium/calcium exchanger protein | MSMEG_2079 Alcohol dehydrogenase (Alcohol dehydrogenase, zinc-binding protein) |
| MSMEG_2905 Transcriptional regulator | MSMEG_0582 Succinate semialdehyde dehydrogenase (EC 1.2.1.16) (Succinic semialdehyde dehydrogenase) |
| MSMEG_0876 Short chain dehydrogenase (Short-chain dehydrogenase/reductase SDR) | MSMEG_0581 4-aminobutyrate aminotransferase (4-aminobutyrate transaminase) (EC 2.6.1.19) |
| MSMEG_4554 Probable serine/threonine-protein kinase PknH, putative (EC 2.7.11.1) (Serine/threonine protein kinase) | MSMEG_4986 Glycosyl transferase family 39 (Glycosyl transferase, family protein 39) |
| MSMEG_3534 4-hydroxybenzoyl-CoA thioesterase | MSMEG_0228 Adenylate and Guanylate cyclase catalytic domain protein |
| MSMEG_3532 Serine/threonine dehydratase family protein | MSMEG_5981 Glycosyl transferase, putative |
KO_stationary.phase_rep1
KO_stationary.phase_rep2
Biological.replicate.5.of.7..falcarinol.treatment
WT.vs..DamtR.without.N_rep1
Wild.type.rep2.y
WT.vs..DamtR.without.N_rep2
dosR.WT_Replicate4
Biological.replicate.3.of.7..falcarinol.treatment
Bedaquiline.vs..DMSO.30min
Biological.replicate.3.of.7..ethambutol.treatment
MB100pruR.vs..MB100..rep.3
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
KO_log.phase_rep1
WT.vs..DamtR.N.surplus_dyeswap_rep2
Wild.type.rep1.x
Wild.type.rep1.y
DglnR_without.vs..with.N_rep2
Biological.replicate.6.of.6..negative.control
WT.vs..DamtR.without.N_.dyeswap_rep1
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.1.of.7..ethambutol.treatment
rel.knockout.rep2
rel.knockout.rep1
Bedaquiline.vs..DMSO..45min
Biological.replicate.1.of.7..falcarinol.treatment
Bedaquiline.vs..DMSO.15min
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
Biological.replicate.3.of.6..isoniazid.treatment
DamtR.with.vs..DamtR.without.N_.rep2
X3dbfcy5plogcy3slide601norm
Biological.replicate.4.of.6..kanamycin.treatment
X0.6..vs..50..air.saturation.Replicate.5
X0.6..vs..50..air.saturation.Replicate.4
WT.vs..DamtR.N.surplus_rep1
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
mc2155.vs.Dcrp1.replicate.2
Biological.replicate.5.of.6..kanamycin.treatment
mc2155.vs.Dcrp1.replicate.1
mc2155.vs.Dcrp1.replicate.4
WT.vs..DamtR.N.surplus_rep2
dcpA.knockout.rep2
Biological.replicate.2.of.7..falcarinol.treatment
stphcy5plogcy3slide580norm
WT_log.phase_rep2
Biological.replicate.4.of.7..ethambutol.treatment
Biological.replicate.2.of.7..ethambutol.treatment
WT_log.phase_rep1
Biological.replicate.4.of.7..panaxydol.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
WT.with.vs..without.N_dye.swap_rep2
WT_stationary.phase_rep2
Biological.replicate.3.of.6..kanamycin.treatment
Biological.replicate.6.of.6..isoniazid.treatment
X4XR.rep2
Biological.replicate.4.of.6..isoniazid.treatment
Wild.type.rep2.x
Slow.vs..Fast.Replicate.5
Biological.replicate.4.of.7..falcarinol.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep2
Biological.replicate.7.of.7..panaxydol.treatment
X4dbfcy5plogcy3slide480norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.with.vs..without.N_rep2
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.vs..DglnR.N_starvation_rep2
DglnR_without.vs..with.N_dyeswap_rep2
Biological.replicate.1.of.6..negative.control
WT.vs..DglnR.N_starvation_rep1
BatchCulture_LBTbroth_StationaryPhase_Replicate4
BatchCulture_LBTbroth_StationaryPhase_Replicate2
Biological.replicate.2.of.6..kanamycin.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
Comments
Log in to post comments