Module 433 Residual: 0.55
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.55 | 0.00000000091 | 0.000011 | 84 | 26 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.00000000091 | |
| Motif 2 |
 |
| e-value: 0.000011 |
| MSMEG_6633 Malonate decarboxylase acyl carrier protein (Malonate decarboxylase delta subunit) | MSMEG_2450 Adenosylmethionine--8-amino-7-oxononanoate transaminase (Aminotransferase class-III) (EC 2.6.1.-) |
| MSMEG_6632 Beta subunit of malonate decarboxylase (EC 6.4.1.3) | MSMEG_5397 ATP-dependent DNA helicase RecQ (EC 3.6.1.-) |
| MSMEG_6631 Phosphoribosyl-dephospho-CoA transferase MdcG (EC 2.7.7.61) | MSMEG_5390 Uncharacterized protein |
| MSMEG_6196 Gaba permease | MSMEG_4336 Uncharacterized protein |
| MSMEG_0371 MaoC like domain protein (MaoC-like dehydratase) | MSMEG_6629 Malonate decarboxylase, epsilon subunit (Malonate decarboxylase, epsilon subunit (Acyl carrier transferase)) (EC 2.3.1.39) |
| MSMEG_0372 3-oxoacyl-acyl-carrier protein reductase FabG4 (EC 1.1.1.100) (Oxidoreductase, short chain dehydrogenase/reductase family protein) | MSMEG_4436 Transketolase (EC 2.2.1.1) |
| MSMEG_6194 Beta-lactamase related protein (Putative beta-lactamase) | MSMEG_4435 Dimethylmenaquinone methyltransferase (EC 4.1.1.68) |
| MSMEG_1824 Transcriptional regulator, LytR family protein | MSMEG_0365 Uncharacterized protein |
| MSMEG_1533 Subtilase family protein | MSMEG_0364 Uncharacterized protein |
| MSMEG_5877 Uncharacterized protein | MSMEG_3459 Uncharacterized protein |
| MSMEG_1535 Uncharacterized protein | MSMEG_2449 Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) |
| MSMEG_1537 Conserved hypothetical alanine and valine rich protein (Uncharacterized protein) | MSMEG_5388 Uncharacterized protein |
| MSMEG_1536 Cell division FtsK/SpoIIIE (Ftsk/spoiiie family protein) | MSMEG_2447 Purine catabolism PurC-like protein (Regulatory protein) |
Wild.type.rep2.x
KO_stationary.phase_rep1
KO_stationary.phase_rep2
Biological.replicate.5.of.7..falcarinol.treatment
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
dcpA.knockout.rep2
Mycobacterium.smegmatis.Spheroplast.induced
dosR.WT_Replicate4
Bedaquiline.vs..DMSO.30min
Biological.replicate.4.of.6..isoniazid.treatment
MB100pruR.vs..MB100..rep.3
Tet.CarD.vs.Control..Replicates.1..2..and.3.
dosR.WT_Replicate1
Wild.type.rep2.y
Biological.replicate.7.of.7..falcarinol.treatment
DglnR_without.vs..with.N_rep1
DglnR_without.vs..with.N_rep2
MB100pruR.vs..MB100.rep.2
Biological.replicate.2.of.7..panaxydol.treatment
MB100pruR.vs..MB100.rep.1
Biological.replicate.1.of.6..isoniazid.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
Biological.replicate.3.of.6..kanamycin.treatment
rel.knockout.rep1
Bedaquiline.vs..DMSO..45min
Biological.replicate.6.of.7..falcarinol.treatment
Bedaquiline.vs..DMSO.15min
M..smegmatis.Acid.NO.treated
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.4.of.6..kanamycin.treatment
Biological.replicate.5.of.6..kanamycin.treatment
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.2
dosR.WT_Replicate2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
mc2155.vs.Dcrp1.replicate.4
stphcy5plogcy3slide487norm
Slow.vs..Fast.Replicate.3
Plogcy5plogcy3slide113norm
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
Biological.replicate.5.of.7..panaxydol.treatment
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Biological.replicate.2.of.7..falcarinol.treatment
WT_log.phase_rep2
X2.5..vs..50..air.saturation.Replicate.5
WT_log.phase_rep1
Biological.replicate.4.of.7..panaxydol.treatment
X4dbfcy5plogcy3slide480norm
X2.5..vs..50..air.saturation.Replicate.2
X2.5..vs..50..air.saturation.Replicate.3
Biological.replicate.2.of.6..kanamycin.treatment
WT_stationary.phase_rep1
mc2155.vs.Dcrp1.replicate.1
Biological.replicate.6.of.6..isoniazid.treatment
Biological.replicate.5.of.7..ethambutol.treatment
Slow.vs..Fast.Replicate.4
Slow.vs..Fast.Replicate.5
dosR.WT_Replicate3
WT.vs..DglnR.N_starvation_dye.swap_rep1
Biological.replicate.7.of.7..panaxydol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
X4dbfcy5plogcy3slide901norm
WT.vs..DamtR.N.surplus_dyeswap_rep2
WT.vs..DglnR.N_starvation_rep1
WT.vs..DglnR.N_starvation_rep2
DglnR_without.vs..with.N_dyeswap_rep2
X2XR.rep1
X2XR.rep2
DglnR_without.vs..with.N_dyeswap_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
BatchCulture_LBTbroth_StationaryPhase_Replicate4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate2
BatchCulture_LBTbroth_StationaryPhase_Replicate3
BatchCulture_LBTbroth_StationaryPhase_Replicate1
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
X4dbfcy3plogcy5slide903norm
Bedaquiline.vs..DMSO.120min
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