Module 436 Residual: 0.58
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.58 | 0.000000000000073 | 0.3 | 73 | 27 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.000000000000073 | |
| Motif 2 |
 |
| e-value: 0.3 |
| MSMEG_3286 Methyltransferase | MSMEG_3414 Uncharacterized protein |
| MSMEG_1597 Probable transcriptional regulator WhiB3 | MSMEG_3415 MarR-family protein regulatory protein |
| MSMEG_3070 LprG protein (Uncharacterized protein) | MSMEG_2139 Uncharacterized protein |
| MSMEG_3071 Riboflavin synthase alpha chain (EC 2.5.1.9) (Riboflavin synthase, alpha subunit) | MSMEG_4413 Uncharacterized protein |
| MSMEG_6468 Uncharacterized protein | MSMEG_2562 Uncharacterized protein |
| MSMEG_2166 Transketolase central region (EC 2.2.1.1) (Transketoloase, C half) | MSMEG_2561 Gluconolactonase (EC 3.1.1.17) |
| MSMEG_2165 Transketolase, N-subunit (Transketolase-like protein) (EC 2.2.1.1) | MSMEG_2560 Uncharacterized protein |
| MSMEG_2164 GntR family regulatory protein (Transcriptional regulator, putative) | MSMEG_1834 Phosphomannomutase PmmA (Phosphomannomutase/phosphoglucomutase) (EC 5.4.2.2) (EC 5.4.2.8) |
| MSMEG_2168 Uncharacterized protein | MSMEG_1585 Cupin 2, conserved barrel (Cupin domain protein) |
| MSMEG_5795 4-amino-4-deoxychorismate lyase (Aminotransferase class IV) | MSMEG_4061 Translation initiation inhibitor |
| MSMEG_5796 Glycine cleavage T protein (Aminomethyl transferase) (EC 2.1.2.10) (Glycine cleavage T-protein (Aminomethyl transferase)) | MSMEG_4062 Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.-) |
| MSMEG_3069 Aminoglycosides/tetracycline-transport integral membrane protein (Major facilitator superfamily MFS_1) | MSMEG_2137 Permease of the major facilitator superfamily protein |
| MSMEG_2199 Uncharacterized protein | MSMEG_4744 Uncharacterized protein |
| MSMEG_4455 Beta-lactamase |
KO_stationary.phase_rep1
WT.vs..DamtR.without.N_rep1
Wild.type.rep2.y
Bedaquiline.vs..DMSO.15min
M..smegmatis.Acid.NO.treated
Mycobacterium.smegmatis.Spheroplast.induced
Wild.type.rep2.x
Biological.replicate.4.of.7..ethambutol.treatment
Biological.replicate.1.of.6..negative.control
Biological.replicate.5.of.6..kanamycin.treatment
dosR.WT_Replicate2
Biological.replicate.2.of.6..kanamycin.treatment
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Plogcy5plogcy3slide110norm
Wild.type.rep1.y
MB100pruR.vs..MB100.rep.4
MB100pruR.vs..MB100.rep.1
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep2
rel.knockout.rep1
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.3.of.7..falcarinol.treatment
Biological.replicate.6.of.7..panaxydol.treatment
DamtR.with.vs..DamtR.without.N_.rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
Biological.replicate.3.of.6..isoniazid.treatment
DamtR.with.vs..DamtR.without.N_.rep2
Sub.MIC.INH
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
WT.vs..DamtR.N.surplus_rep2
Biological.replicate.2.of.7..falcarinol.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
mc2155.vs.Dcrp1.replicate.2
stphcy5plogcy3slide487norm
Biological.replicate.1.of.6..kanamycin.treatment
X3dbfcy3plogcy5slide607norm
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
WT_log.phase_rep2
stphcy3plogcy5slide581norm
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.2
WT_stationary.phase_rep2
Biological.replicate.6.of.6..isoniazid.treatment
Biological.replicate.2.of.7..ethambutol.treatment
Biological.replicate.4.of.6..isoniazid.treatment
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Bedaquiline.vs..DMSO.60min
Biological.replicate.4.of.7..falcarinol.treatment
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.6.of.7..ethambutol.treatment
Biological.replicate.7.of.7..panaxydol.treatment
X3dbfcy5plogcy3slide603norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.with.vs..without.N_rep2
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
Biological.replicate.5.of.7..falcarinol.treatment
DglnR_without.vs..with.N_dyeswap_rep2
X2XR.rep1
DglnR_without.vs..with.N_dyeswap_rep1
BatchCulture_LBTbroth_StationaryPhase_Replicate4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
Plogcy5plogcy3slide113norm
BatchCulture_LBTbroth_StationaryPhase_Replicate3
BatchCulture_LBTbroth_StationaryPhase_Replicate1
Biological.replicate.2.of.6..negative.control
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
Biological.replicate.3.of.6..negative.control
X4dbfcy3plogcy5slide903norm
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