Module 441 Residual: 0.53
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.53 | 0.0000029 | 0.0099 | 86 | 21 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.0000029 | |
| Motif 2 |
 |
| e-value: 0.0099 |
| MSMEG_0572 Uncharacterized protein | MSMEG_4491 DNA repair protein RecO (Recombination protein O) |
| MSMEG_4488 Hydrolase, nudix family protein (MutT/NUDIX family protein) | MSMEG_5573 Sugar ABC transporter permease protein |
| MSMEG_0571 Hydrolase, carbon-nitrogen family protein (Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase) (EC 3.5.5.1) | MSMEG_4489 Uncharacterized protein |
| MSMEG_5572 Sugar ABC transporter permease protein | MSMEG_5575 Repressor |
| MSMEG_0574 RNA polymerase sigma factor | MSMEG_5574 Substrate binding protein |
| MSMEG_0566 Aliphatic amidase (Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase) (EC 3.5.-.-) | MSMEG_5577 Fructokinase (Fructokinase, PfkB) (EC 2.7.1.4) |
| MSMEG_0569 Flavoprotein involved in K+ transport | MSMEG_4490 Decaprenyl diphosphate synthase (DecaPP) (EC 2.5.1.86) (Decaprenyl pyrophosphate synthase) (Long-chain isoprenyl diphosphate synthase) (Trans,polycis-decaprenyl diphosphate synthase) |
| MSMEG_0568 Radical SAM domain protein | MSMEG_6492 GAF domain protein, putative |
| MSMEG_4492 Amidase | MSMEG_6491 Aldehyde dehydrogenase |
| MSMEG_0570 Uncharacterized protein | MSMEG_5576 D-mannonate oxidoreductase (EC 1.1.1.57) |
| MSMEG_5571 ABC transporter ATP-binding protein (Sugar ABC transporter ATP-binding protein) |
KO_stationary.phase_rep1
Plogcy5plogcy3slide110norm
MB100pruR.vs..MB100.rep.2
Biological.replicate.5.of.7..panaxydol.treatment
Biological.replicate.3.of.6..kanamycin.treatment
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.6.of.7..panaxydol.treatment
DamtR.with.vs..DamtR.without.N_.rep1
DamtR.with.vs..DamtR.without.N_.rep2
WT.vs..DamtR.N.surplus_rep1
stphcy5plogcy3slide487norm
stphcy5plogcy3slide580norm
Biological.replicate.2.of.7..ethambutol.treatment
Biological.replicate.4.of.7..falcarinol.treatment
WT.vs..DamtR.without.N_rep1
WT.vs..DamtR.without.N_rep2
dosR.WT_Replicate1
Biological.replicate.2.of.7..panaxydol.treatment
DglnR_without.vs..with.N_rep1
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.6.of.6..negative.control
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.2.of.7..falcarinol.treatment
Biological.replicate.1.of.7..panaxydol.treatment
stphcy3plogcy5slide581norm
WT_log.phase_rep1
WT.with.vs..without.N_dye.swap_rep1
WT.with.vs..without.N_dye.swap_rep2
Biological.replicate.6.of.6..isoniazid.treatment
Biological.replicate.5.of.7..ethambutol.treatment
Biological.replicate.7.of.7..panaxydol.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
WT.vs..DglnR.N_starvation_rep1
X2XR.rep2
X4dbfcy3plogcy5slide903norm
Bedaquiline.vs..DMSO.15min
Mycobacterium.smegmatis.Spheroplast.induced
Biological.replicate.7.of.7..falcarinol.treatment
DglnR_without.vs..with.N_rep2
rel.knockout.rep2
Biological.replicate.6.of.7..falcarinol.treatment
M..smegmatis.Acid.NO.treated
Biological.replicate.3.of.6..isoniazid.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
WT_stationary.phase_rep1
Biological.replicate.2.of.6..isoniazid.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
Biological.replicate.2.of.6..negative.control
WT.with.vs..without.N_rep1
Wild.type.rep1.y
WT.vs..DamtR.without.N_.dyeswap_rep1
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.3.of.7..falcarinol.treatment
Wild.type.rep3
Biological.replicate.3.of.7..ethambutol.treatment
X0.6..vs..50..air.saturation.Replicate.4
mc2155.vs.Dcrp1.replicate.2
mc2155.vs.Dcrp1.replicate.3
X3dbfcy3plogcy5slide607norm
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
dcpA.knockout.rep2
dcpA.knockout.rep1
X2.5..vs..50..air.saturation.Replicate.1
X2.5..vs..50..air.saturation.Replicate.2
X2.5..vs..50..air.saturation.Replicate.3
Slow.vs..Fast.Replicate.4
Biological.replicate.5.of.6..isoniazid.treatment
Slow.vs..Fast.Replicate.1
Slow.vs..Fast.Replicate.3
X3dbfcy5plogcy3slide603norm
WT.vs..DamtR.N.surplus_dyeswap_rep2
WT.with.vs..without.N_rep2
Biological.replicate.5.of.7..falcarinol.treatment
DglnR_without.vs..with.N_dyeswap_rep2
Biological.replicate.1.of.6..negative.control
DglnR_without.vs..with.N_dyeswap_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate3
Biological.replicate.2.of.6..kanamycin.treatment
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