Module 481 Residual: 1.00Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)

Summary

Residual	Motif 1 e-value	Motif 2 e-value	Conditions	Genes	version
1.00			79	0	20160204

Motifs

Motif 1

Motif 2

Module Plots

Members

Conditions

KO_stationary.phase_rep2

WT.vs..DglnR.N_starvation_rep2

Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.

Biological.replicate.4.of.7..ethambutol.treatment

Bedaquiline.vs..DMSO.30min

X2XR.rep1

Plogcy5plogcy3slide113norm

Biological.replicate.1.of.7..panaxydol.treatment

Biological.replicate.2.of.6..kanamycin.treatment

Wild.type.rep2.y

Plogcy5plogcy3slide110norm

Wild.type.rep1.x

Wild.type.rep1.y

MB100pruR.vs..MB100.rep.4

Biological.replicate.3.of.7..panaxydol.treatment

Biological.replicate.2.of.7..panaxydol.treatment

Biological.replicate.1.of.6..kanamycin.treatment

Biological.replicate.1.of.7..ethambutol.treatment

Biological.replicate.6.of.6..kanamycin.treatment

rel.knockout.rep2

rel.knockout.rep1

Bedaquiline.vs..DMSO..45min

Biological.replicate.1.of.7..falcarinol.treatment

Biological.replicate.1.of.6..negative.control

DamtR.with.vs..DamtR.without.N_.rep1

JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3

Biological.replicate.4.of.6..kanamycin.treatment

WT.vs..DglnR.N_starvation_dye.swap_rep1

Biological.replicate.5.of.6..kanamycin.treatment

X0.6..vs..50..air.saturation.Replicate.3

X0.6..vs..50..air.saturation.Replicate.2

Biological.replicate.5.of.7..falcarinol.treatment

Biological.replicate.6.of.7..ethambutol.treatment

M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3

stphcy5plogcy3slide487norm

mc2155.vs.Dcrp1.replicate.1

X3dbfcy3plogcy5slide607norm

WT.vs..DamtR.N.surplus_rep2

dcpA.knockout.rep2

WT.vs..DamtR.N.surplus_rep1

stphcy5plogcy3slide580norm

X3dbfcy5plogcy3slide601norm

Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.

stphcy3plogcy5slide581norm

WT_log.phase_rep1

Biological.replicate.4.of.7..panaxydol.treatment

X2.5..vs..50..air.saturation.Replicate.2

WT.with.vs..without.N_dye.swap_rep2

WT_stationary.phase_rep2

WT_stationary.phase_rep1

Biological.replicate.6.of.6..isoniazid.treatment

Biological.replicate.2.of.7..ethambutol.treatment

DamtR.with.vs..DamtR.without.N_dyeswap_.rep1

Bedaquiline.vs..DMSO.60min

Biological.replicate.5.of.6..isoniazid.treatment

Slow.vs..Fast.Replicate.1

Slow.vs..Fast.Replicate.2

mc2155.pMind..vs.mc2155.pMind.6189.replicate.3

BatchCulture_LBTbroth_ExponentialPhase_Replicate3

X4dbfcy5plogcy3slide480norm

BatchCulture_LBTbroth_ExponentialPhase_Replicate1

mc2155.pMind..vs.mc2155.pMind.6189.replicate.2

X4dbfcy5plogcy3slide901norm

BatchCulture_LBTbroth_ExponentialPhase_Replicate4

WT.vs..DamtR.N.surplus_.dyeswap_rep1

WT.with.vs..without.N_rep2

Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.

WT.with.vs..without.N_rep1

Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.

X2XR.rep2

mc2155.pMind..vs.mc2155.pMind.6189.replicate.1

BatchCulture_LBTbroth_StationaryPhase_Replicate4

Sub.MIC.INH

BatchCulture_LBTbroth_StationaryPhase_Replicate2

BatchCulture_LBTbroth_StationaryPhase_Replicate1

Biological.replicate.2.of.6..negative.control

M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2

M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1

Bedaquiline.vs..DMSO.120min

Comments