Module 556 Residual: 0.56
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.56 | 0.0000000000029 | 0.0000079 | 77 | 25 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.0000000000029 | |
| Motif 2 |
 |
| e-value: 0.0000079 |
| MSMEG_3119 ABC transporter ATP-binding protein (ABC transporter, ATP-binding subunit) | MSMEG_3121 DNA-binding protein |
| MSMEG_3118 ABC transporter efflux protein, DrrB family protein | MSMEG_3122 FeS assembly protein SufB |
| MSMEG_1994 HpcH/HpaI aldolase | MSMEG_3123 FeS assembly protein SufD |
| MSMEG_1993 MaoC like domain protein | MSMEG_6307 Glutamine-binding periplasmic protein/glutamine transport system permease protein |
| MSMEG_1417 Glyoxalase family protein (Glyoxalase/bleomycin resistance protein/dioxygenase) (EC 4.4.1.5) | MSMEG_1378 1-phosphofructokinase (Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) (1-phosphofructokinase protein)) (EC 2.7.1.56) |
| MSMEG_1418 RNA polymerase ECF-type sigma factor (RNA polymerase, sigma-24 subunit, ECF subfamily) | MSMEG_1377 DeoR-family protein transcriptional regulator (DeoR-family transcriptional regulator) |
| MSMEG_1419 Uncharacterized protein | MSMEG_1376 Putative xylulose kinase |
| MSMEG_6183 Membrane-associated serine protease (Serine protease) | MSMEG_1375 Fructose-bisphosphate aldolase (EC 4.1.2.13) (Tagatose-1,6-bisphosphate aldolase GatY) (EC 4.1.2.-) |
| MSMEG_3124 FeS assembly ATPase SufC | MSMEG_6185 NTP pyrophosphohydrolase (NUDIX hydrolase) |
| MSMEG_3125 Cysteine desulfurase (EC 2.8.1.7) | MSMEG_5784 Transcriptional regulatory protein |
| MSMEG_3126 SUF system FeS assembly protein (SUF system FeS assembly protein, NifU family protein) | MSMEG_6186 Putative membrane-anchored thioredoxin-like protein (Thiol-disulfide interchange related protein) (Uncharacterized protein) |
| MSMEG_3127 Conserved protein, DUF59 (Putative metal-sulfur cluster biosynthetic enzyme) | MSMEG_6309 ABC amino acid transporter, ATP-binding component (ABC transporter, ATP-binding protein) |
| MSMEG_3120 Probable alpha-(1->6)-mannopyranosyltransferase MSMEG_3120/MSMEI_3041 (EC 2.4.1.-) |
KO_stationary.phase_rep2
Biological.replicate.5.of.7..falcarinol.treatment
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Biological.replicate.5.of.7..panaxydol.treatment
Biological.replicate.4.of.7..ethambutol.treatment
Bedaquiline.vs..DMSO.30min
rel.knockout.rep2
MB100pruR.vs..MB100..rep.3
dosR.WT_Replicate1
Biological.replicate.5.of.6..negative.control
KO_log.phase_rep2
KO_log.phase_rep1
dosR.WT_Replicate4
DglnR_without.vs..with.N_rep1
MB100pruR.vs..MB100.rep.4
DamtR.with.vs..DamtR.without.N_.rep2
Biological.replicate.6.of.6..negative.control
DglnR_without.vs..with.N_rep2
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.1.of.6..isoniazid.treatment
Bedaquiline.vs..DMSO.60min
Biological.replicate.6.of.6..kanamycin.treatment
Biological.replicate.3.of.7..falcarinol.treatment
Wild.type.rep3
Bedaquiline.vs..DMSO..45min
MB100pruR.vs..MB100.rep.2
Biological.replicate.6.of.7..panaxydol.treatment
Bedaquiline.vs..DMSO.15min
M..smegmatis.Acid.NO.treated
Biological.replicate.3.of.6..isoniazid.treatment
WT.vs..DamtR.without.N_.dyeswap_rep1
X0.6..vs..50..air.saturation.Replicate.1
X3dbfcy5plogcy3slide601norm
X0.6..vs..50..air.saturation.Replicate.4
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
stphcy5plogcy3slide487norm
Biological.replicate.7.of.7..panaxydol.treatment
WT.vs..DamtR.N.surplus_rep2
dcpA.knockout.rep2
Biological.replicate.2.of.7..falcarinol.treatment
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
X2.5..vs..50..air.saturation.Replicate.4
X2.5..vs..50..air.saturation.Replicate.5
Biological.replicate.2.of.7..ethambutol.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
Biological.replicate.5.of.6..isoniazid.treatment
X2.5..vs..50..air.saturation.Replicate.3
Biological.replicate.2.of.6..negative.control
Biological.replicate.3.of.6..kanamycin.treatment
Biological.replicate.6.of.6..isoniazid.treatment
X4XR.rep2
Biological.replicate.2.of.6..isoniazid.treatment
Slow.vs..Fast.Replicate.4
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
WT.with.vs..without.N_dye.swap_rep2
Biological.replicate.2.of.6..kanamycin.treatment
Slow.vs..Fast.Replicate.1
Biological.replicate.6.of.7..ethambutol.treatment
Slow.vs..Fast.Replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
X3dbfcy5plogcy3slide603norm
Biological.replicate.5.of.6..kanamycin.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.with.vs..without.N_rep2
Biological.replicate.1.of.7..falcarinol.treatment
DglnR_without.vs..with.N_dyeswap_rep2
DglnR_without.vs..with.N_dyeswap_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
Biological.replicate.3.of.7..panaxydol.treatment
BatchCulture_LBTbroth_StationaryPhase_Replicate3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
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