Module 563 Residual: 1.00Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)

Summary

Residual	Motif 1 e-value	Motif 2 e-value	Conditions	Genes	version
1.00			79	0	20160204

Motifs

Motif 1

Motif 2

Module Plots

Members

Conditions

Wild.type.rep2.x

KO_stationary.phase_rep2

Biological.replicate.5.of.7..falcarinol.treatment

M..smegmatis.Acid.NO.treated

Biological.replicate.4.of.6..negative.control

dosR.WT_Replicate4

Biological.replicate.4.of.7..ethambutol.treatment

Bedaquiline.vs..DMSO.30min

Biological.replicate.1.of.6..negative.control

dosR.WT_Replicate3

dosR.WT_Replicate2

dosR.WT_Replicate1

Biological.replicate.2.of.6..kanamycin.treatment

Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.

Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.

DglnR_without.vs..with.N_rep1

DglnR_without.vs..with.N_rep2

MB100pruR.vs..MB100.rep.2

WT.vs..DamtR.without.N_.dyeswap_rep1

WT.vs..DamtR.without.N_.dyeswap_rep2

MB100pruR.vs..MB100.rep.1

Biological.replicate.1.of.6..isoniazid.treatment

mc2155.pMind..vs.mc2155.pMind.6189.replicate.1

Bedaquiline.vs..DMSO.60min

Biological.replicate.2.of.7..falcarinol.treatment

Wild.type.rep3

Bedaquiline.vs..DMSO..45min

Biological.replicate.6.of.6..negative.control

Biological.replicate.6.of.7..panaxydol.treatment

DamtR.with.vs..DamtR.without.N_.rep1

Biological.replicate.3.of.7..ethambutol.treatment

DamtR.with.vs..DamtR.without.N_.rep2

X0.6..vs..50..air.saturation.Replicate.1

X0.6..vs..50..air.saturation.Replicate.2

X0.6..vs..50..air.saturation.Replicate.5

X0.6..vs..50..air.saturation.Replicate.4

M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3

Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.

mc2155.vs.Dcrp1.replicate.3

Biological.replicate.1.of.7..panaxydol.treatment

mc2155.vs.Dcrp1.replicate.4

JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4

WT.vs..DamtR.N.surplus_rep1

Slow.vs..Fast.Replicate.2

X2.5..vs..50..air.saturation.Replicate.5

stphcy3plogcy5slide581norm

WT_log.phase_rep1

X4dbfcy5plogcy3slide480norm

Biological.replicate.2.of.7..ethambutol.treatment

WT.with.vs..without.N_dye.swap_rep2

WT_stationary.phase_rep2

WT.vs..DglnR.N_starvation_dye.swap_rep1

X4XR.rep2

X4XR.rep1

Slow.vs..Fast.Replicate.4

Slow.vs..Fast.Replicate.5

WT.vs..DglnR.N_starvation_dye.swap_rep2

Slow.vs..Fast.Replicate.1

Biological.replicate.6.of.7..ethambutol.treatment

BatchCulture_LBTbroth_ExponentialPhase_Replicate2

Biological.replicate.5.of.6..negative.control

X3dbfcy5plogcy3slide603norm

mc2155.pMind..vs.mc2155.pMind.6189.replicate.2

BatchCulture_LBTbroth_ExponentialPhase_Replicate4

WT.vs..DamtR.N.surplus_dyeswap_rep2

WT.with.vs..without.N_rep2

WT.vs..DglnR.N_starvation_rep2

DglnR_without.vs..with.N_dyeswap_rep2

Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.

DglnR_without.vs..with.N_dyeswap_rep1

JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1

Biological.replicate.2.of.6..negative.control

Biological.replicate.1.of.7..falcarinol.treatment

BatchCulture_LBTbroth_StationaryPhase_Replicate2

BatchCulture_LBTbroth_StationaryPhase_Replicate3

M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3

M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2

WT.vs..DamtR.N.surplus_rep2

Bedaquiline.vs..DMSO.120min

Comments