Module 575 Residual: 0.58
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.58 | 0.00000021 | 0.049 | 86 | 20 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.00000021 | |
| Motif 2 |
 |
| e-value: 0.049 |
| MSMEG_4757 Fatty acid synthase | MSMEG_0295 Oxidoreductase, FAD-binding |
| MSMEG_3394 Cupin domain protein | MSMEG_0294 3-oxoacyl-(Acyl-carrier-protein) reductase (EC 1.1.1.100) (Short-chain dehydrogenase/reductase SDR) |
| MSMEG_0292 Uncharacterized protein | MSMEG_0293 Rieske (2Fe-2S) region (EC 1.14.12.12) (Rieske [2Fe-2S] domain protein) |
| MSMEG_6877 Branched-chain amino acid transport system ATP-binding protein | MSMEG_4758 Uncharacterized protein |
| MSMEG_6876 Branched chain amino acid transport ATP-binding protein (Branched-chain amino acid ABC transporter ATP-binding protein) (EC 3.6.3.27) | MSMEG_6493 Uncharacterized protein |
| MSMEG_6880 Hydrophobic amino acid ABC transporter, putative | MSMEG_4759 Uncharacterized protein |
| MSMEG_6878 Branched-chain amino acid ABC transporter permease protein (Inner-membrane translocator) | MSMEG_3393 Putative acyl-CoA dehydrogenase |
| MSMEG_3391 L-carnitine dehydratase/bile acid-inducible protein F (EC 2.8.3.16) | MSMEG_3392 Acyl-CoA dehydrogenase (EC 1.3.8.-) (Acyl-CoA dehydrogenase domain protein) |
| MSMEG_4756 Holo-[acyl-carrier-protein] synthase (Holo-ACP synthase) (EC 2.7.8.7) (4'-phosphopantetheinyl transferase AcpS) | MSMEG_6495 ABC nitrate/sulfonate/bicarbonate family protein transporter, inner membrane subunit, putative |
| MSMEG_6879 ABC-type branched-chain amino acid transport system, permease protein I (Integral membrane protein of the ABC-type Nat permease for neutral amino acids NatD) | MSMEG_6494 ABC nitrate/sulfonate/bicarbonate family protein transporter, inner membrane subunit, putative (Binding-protein-dependent transport systems inner membrane component) |
KO_stationary.phase_rep2
Biological.replicate.3.of.7..ethambutol.treatment
Wild.type.rep2.y
Wild.type.rep2.x
MB100pruR.vs..MB100.rep.4
MB100pruR.vs..MB100.rep.2
DamtR.with.vs..DamtR.without.N_.rep1
DamtR.with.vs..DamtR.without.N_.rep2
stphcy5plogcy3slide487norm
X3dbfcy5plogcy3slide601norm
X3dbfcy3plogcy5slide607norm
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Biological.replicate.6.of.7..ethambutol.treatment
X4dbfcy5plogcy3slide901norm
WT.vs..DamtR.without.N_rep1
Biological.replicate.4.of.6..negative.control
Plogcy5plogcy3slide110norm
dosR.WT_Replicate2
Biological.replicate.2.of.7..panaxydol.treatment
Biological.replicate.6.of.6..negative.control
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.1.of.7..panaxydol.treatment
WT_log.phase_rep2
WT_log.phase_rep1
WT.with.vs..without.N_dye.swap_rep1
WT.with.vs..without.N_dye.swap_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
Biological.replicate.5.of.7..ethambutol.treatment
Biological.replicate.7.of.7..panaxydol.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
WT.vs..DglnR.N_starvation_rep1
WT.vs..DglnR.N_starvation_rep2
X2XR.rep1
Sub.MIC.INH
Bedaquiline.vs..DMSO.15min
Mycobacterium.smegmatis.Spheroplast.induced
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
DglnR_without.vs..with.N_rep1
DglnR_without.vs..with.N_rep2
Biological.replicate.3.of.6..kanamycin.treatment
rel.knockout.rep1
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
Biological.replicate.5.of.6..kanamycin.treatment
WT_stationary.phase_rep2
WT_stationary.phase_rep1
Biological.replicate.2.of.6..isoniazid.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
X4dbfcy5plogcy3slide480norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
Biological.replicate.2.of.6..negative.control
Bedaquiline.vs..DMSO.30min
WT.with.vs..without.N_rep1
Wild.type.rep1.y
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.3.of.7..falcarinol.treatment
Wild.type.rep3
Biological.replicate.4.of.6..isoniazid.treatment
X0.6..vs..50..air.saturation.Replicate.1
X0.6..vs..50..air.saturation.Replicate.5
mc2155.vs.Dcrp1.replicate.3
mc2155.vs.Dcrp1.replicate.1
BatchCulture_LBTbroth_StationaryPhase_Replicate3
Plogcy5plogcy3slide111norm
X2.5..vs..50..air.saturation.Replicate.5
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.1
X2.5..vs..50..air.saturation.Replicate.2
X4XR.rep2
X4XR.rep1
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Slow.vs..Fast.Replicate.3
Biological.replicate.5.of.6..negative.control
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.with.vs..without.N_rep2
Biological.replicate.5.of.7..falcarinol.treatment
DglnR_without.vs..with.N_dyeswap_rep2
DglnR_without.vs..with.N_dyeswap_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
BatchCulture_LBTbroth_StationaryPhase_Replicate2
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
Biological.replicate.2.of.6..kanamycin.treatment
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