Module 589 Residual: 0.55
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.55 | 0.0000000005 | 3.6 | 82 | 20 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.0000000005 | |
| Motif 2 |
 |
| e-value: 3.6 |
| MSMEG_4066 Uncharacterized protein | MSMEG_3219 Indole-3-glycerol phosphate synthase (IGPS) (EC 4.1.1.48) |
| MSMEG_3250 ABC transporter, ATP-binding protein (Branched-chain amino acid ABC transporter (LivG)) | MSMEG_4068 Uncharacterized protein |
| MSMEG_6755 Isoflavone reductase | MSMEG_2225 TetR family transcriptional regulator (Transcriptional regulator, TetR family protein) |
| MSMEG_3220 Tryptophan synthase beta chain (EC 4.2.1.20) | MSMEG_2226 Uncharacterized protein |
| MSMEG_3251 Branched-chain amino acid ABC transporter ATP-binding protein | MSMEG_2227 Carnitinyl-CoA dehydratase (EC 4.2.1.-) (Enoyl-CoA hydratase EchA1) (EC 4.2.1.17) |
| MSMEG_1557 30S ribosomal protein S9 | MSMEG_2228 Oxidoreductase, short chain dehydrogenase/reductase family protein (Short-chain dehydrogenase/reductase SDR) |
| MSMEG_3221 Tryptophan synthase alpha chain (EC 4.2.1.20) | MSMEG_1556 50S ribosomal protein L13 |
| MSMEG_3882 Glyoxalase family protein (Glyoxalase/bleomycin resistance protein/dioxygenase) (EC 4.4.1.5) | MSMEG_3881 Proline dipeptidase (Putative dipeptidase pepE) (EC 3.4.13.9) |
| MSMEG_3222 Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-) | MSMEG_3249 Branched chain amino acid transport permease (Branched-chain amino acid ABC transporter, permease protein) |
| MSMEG_3247 Branched-chain amino acid ABC transporter substrate-binding protein | MSMEG_3248 ABC transporter branched chain amino acid transport permease (Inner-membrane translocator) |
Biological.replicate.4.of.7..falcarinol.treatment
KO_stationary.phase_rep1
Biological.replicate.5.of.7..falcarinol.treatment
WT.vs..DamtR.without.N_rep1
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
WT.vs..DamtR.without.N_rep2
Biological.replicate.2.of.6..isoniazid.treatment
Wild.type.rep3
Biological.replicate.2.of.7..falcarinol.treatment
MB100pruR.vs..MB100..rep.3
dosR.WT_Replicate2
dosR.WT_Replicate1
Biological.replicate.5.of.6..negative.control
KO_log.phase_rep2
KO_log.phase_rep1
Biological.replicate.7.of.7..falcarinol.treatment
Wild.type.rep1.x
Wild.type.rep1.y
MB100pruR.vs..MB100.rep.4
Biological.replicate.6.of.6..negative.control
Biological.replicate.2.of.7..panaxydol.treatment
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.7.of.7..ethambutol.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
rel.knockout.rep2
rel.knockout.rep1
Bedaquiline.vs..DMSO..45min
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.6.of.7..falcarinol.treatment
Bedaquiline.vs..DMSO.15min
M..smegmatis.Acid.NO.treated
X0.6..vs..50..air.saturation.Replicate.1
WT_log.phase_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
Biological.replicate.6.of.7..ethambutol.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
mc2155.vs.Dcrp1.replicate.2
mc2155.vs.Dcrp1.replicate.3
Wild.type.rep2.y
Biological.replicate.7.of.7..panaxydol.treatment
WT.vs..DamtR.N.surplus_rep2
dcpA.knockout.rep1
X4dbfcy5plogcy3slide480norm
WT.vs..DamtR.N.surplus_rep1
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
X2.5..vs..50..air.saturation.Replicate.4
stphcy3plogcy5slide581norm
WT.with.vs..without.N_dye.swap_rep1
X2.5..vs..50..air.saturation.Replicate.1
WT.with.vs..without.N_dye.swap_rep2
WT_stationary.phase_rep2
WT_stationary.phase_rep1
Biological.replicate.6.of.6..isoniazid.treatment
X4XR.rep2
X4XR.rep1
Slow.vs..Fast.Replicate.4
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Bedaquiline.vs..DMSO.60min
Biological.replicate.2.of.6..kanamycin.treatment
Slow.vs..Fast.Replicate.1
Slow.vs..Fast.Replicate.2
Slow.vs..Fast.Replicate.3
dosR.WT_Replicate3
X3dbfcy5plogcy3slide603norm
Biological.replicate.5.of.6..kanamycin.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
WT.with.vs..without.N_rep1
Biological.replicate.1.of.6..negative.control
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
Biological.replicate.2.of.6..negative.control
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate2
BatchCulture_LBTbroth_StationaryPhase_Replicate3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
Biological.replicate.3.of.6..negative.control
Bedaquiline.vs..DMSO.120min
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