Module 598 Residual: 0.52
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.52 | 0.00000000000018 | 0.0037 | 77 | 32 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.00000000000018 | |
| Motif 2 |
 |
| e-value: 0.0037 |
| MSMEG_3316 Major facilitator superfamily MFS-1 (Transporter, major facilitator family protein) | MSMEG_6499 Uncharacterized protein |
| MSMEG_3283 Membrane transport protein | MSMEG_5118 NUDIX hydrolase (EC 3.6.1.13) (Nudix hydrolase) |
| MSMEG_0908 Uncharacterized protein | MSMEG_4182 Arabinose-proton symporter |
| MSMEG_0865 Bacterial membrane flanked domain family protein (Membrane-flanked domain protein) | MSMEG_5884 3-hydroxyisobutyrate dehydrogenase family protein (6-phosphogluconate dehydrogenase NAD-binding protein) (EC 1.1.1.31) |
| MSMEG_5733 Putative universal stress protein UspA (Universal stress protein family protein) | MSMEG_2470 Acyl-CoA thioesterase (EC 3.1.2.2) |
| MSMEG_5731 Transcriptional regulator, GntR family (Transcriptional regulator, GntR family protein) | MSMEG_2803 Uncharacterized protein |
| MSMEG_5201 GntR family transcriptional regulator (Regulatory protein GntR, HTH) | MSMEG_3065 Fmu (Sun) (Ribosomal RNA small subunit methyltransferase B) (EC 2.1.1.-) |
| MSMEG_0519 Uncharacterized protein | MSMEG_3064 Methionyl-tRNA formyltransferase (EC 2.1.2.9) |
| MSMEG_3883 5'-3' exonuclease | MSMEG_1877 Uncharacterized protein |
| MSMEG_3882 Glyoxalase family protein (Glyoxalase/bleomycin resistance protein/dioxygenase) (EC 4.4.1.5) | MSMEG_4140 GntR-family protein transcriptional regulator (GntR-family transcriptional regulator) (EC 2.6.1.39) |
| MSMEG_4053 Transcriptional regulatory protein | MSMEG_3458 Uncharacterized protein |
| MSMEG_3204 Uncharacterized protein | MSMEG_1426 Glycosyl transferase (Probable membrane sugar transferase) |
| MSMEG_2512 L-lactate 2-monooxygenase (Lactate 2-monooxygenase) (EC 1.13.12.4) | MSMEG_1425 Creatininase subfamily protein (EC 3.5.2.10) |
| MSMEG_0701 Uncharacterized protein | MSMEG_6246 Probable hercynylcysteine sulfoxide lyase (EC 4.4.-.-) |
| MSMEG_0700 Uncharacterized protein | MSMEG_1014 DNA polymerase IV (Pol IV) (EC 2.7.7.7) |
| MSMEG_2027 Mycobacterium tuberculosis paralogous family 11 (Uncharacterized protein) | MSMEG_2468 L-carnitine dehydratase/bile acid-inducible protein F |
KO_stationary.phase_rep1
WT.vs..DglnR.N_starvation_rep2
WT.vs..DamtR.without.N_rep1
Biological.replicate.2.of.7..panaxydol.treatment
Biological.replicate.3.of.6..kanamycin.treatment
WT.vs..DamtR.without.N_rep2
M..smegmatis.Acid.NO.treated
Mycobacterium.smegmatis.Spheroplast.induced
X4XR.rep1
Wild.type.rep3
MB100pruR.vs..MB100..rep.3
dosR.WT_Replicate2
dosR.WT_Replicate1
KO_log.phase_rep2
KO_log.phase_rep1
Plogcy5plogcy3slide110norm
X3dbfcy5plogcy3slide601norm
Wild.type.rep1.y
WT.vs..DamtR.without.N_.dyeswap_rep1
WT.vs..DamtR.without.N_.dyeswap_rep2
MB100pruR.vs..MB100.rep.1
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.1.of.7..ethambutol.treatment
WT.with.vs..without.N_dye.swap_rep1
rel.knockout.rep2
rel.knockout.rep1
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.7.of.7..falcarinol.treatment
Biological.replicate.4.of.6..isoniazid.treatment
Biological.replicate.3.of.6..isoniazid.treatment
WT_log.phase_rep2
X0.6..vs..50..air.saturation.Replicate.2
WT.vs..DamtR.N.surplus_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
mc2155.vs.Dcrp1.replicate.2
mc2155.vs.Dcrp1.replicate.3
mc2155.vs.Dcrp1.replicate.1
Biological.replicate.2.of.7..ethambutol.treatment
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
dcpA.knockout.rep2
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Biological.replicate.2.of.6..isoniazid.treatment
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
X2.5..vs..50..air.saturation.Replicate.4
X2.5..vs..50..air.saturation.Replicate.5
stphcy3plogcy5slide581norm
DglnR_without.vs..with.N_rep1
WT_stationary.phase_rep1
Biological.replicate.6.of.6..isoniazid.treatment
X4XR.rep2
Biological.replicate.5.of.7..ethambutol.treatment
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Slow.vs..Fast.Replicate.5
dosR.WT_Replicate3
Bedaquiline.vs..DMSO.60min
Biological.replicate.4.of.7..falcarinol.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep2
Biological.replicate.3.of.7..falcarinol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
WT.vs..DamtR.N.surplus_dyeswap_rep2
WT.vs..DglnR.N_starvation_rep1
WT.with.vs..without.N_rep1
DglnR_without.vs..with.N_dyeswap_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate2
BatchCulture_LBTbroth_StationaryPhase_Replicate3
BatchCulture_LBTbroth_StationaryPhase_Replicate1
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
Biological.replicate.3.of.6..negative.control
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