Module 602 Residual: 0.51
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.51 | 0 | 2e-32 | 81 | 28 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0 | |
| Motif 2 |
 |
| e-value: 2e-32 |
| MSMEG_4547 Acyl-CoA dehydrogenase (EC 1.3.8.-) (Acyl-CoA dehydrogenase family protein) | MSMEG_2807 Putative two-component system response regulator, LuxR family (Two-component system response regulator) |
| MSMEG_4688 DSBA oxidoreductase (Uncharacterized protein) | MSMEG_1732 Transposase IS116/IS110/IS902 family protein |
| MSMEG_4689 Uncharacterized protein | MSMEG_4538 Cysteine desulfurase (EC 2.8.1.7) |
| MSMEG_4831 Transcriptional regulator, TetR family protein | MSMEG_0547 ISMsm5, transposase (Transposase) |
| MSMEG_4830 Uncharacterized protein | MSMEG_1699 Pentachlorophenol 4-monooxygenase |
| MSMEG_1700 TetR-family protein transcriptional regulator | MSMEG_4072 ISMsm5, transposase (Transposase) |
| MSMEG_3193 TetR family transcriptional regulator (Transcriptional regulator, TetR family protein) | MSMEG_3999 ABC transporter periplasmic-binding protein YphF (Putative sugar ABC transporter, periplasmic sugar-binding protein) |
| MSMEG_3194 Biotin synthase (EC 2.8.1.6) | MSMEG_3998 MmsAB operon regulatory protein |
| MSMEG_3599 Periplasmic binding protein/LacI transcriptional regulator (Sugar-binding transcriptional regulator, LacI family protein) | MSMEG_3972 Transcriptional regulator, LysR family protein |
| MSMEG_1123 Cobalamin synthesis protein | MSMEG_3970 Amidase (EC 3.5.1.4) (Glutamyl-tRNA(Gln) amidotransferase subunit A) (EC 6.3.5.-) |
| MSMEG_4537 Major membrane protein I (Major membrane protein I (MMP-I)) | MSMEG_0109 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) (Nicotinamide nucleotide transhydrogenase subunit beta) |
| MSMEG_0110 NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2) (NAD(P) transhydrogenase, alpha subunit) (EC 1.6.1.1) | MSMEG_0108 Acyl-CoA dehydrogenase (EC 1.3.8.1) (EC 1.3.99.-) |
| MSMEG_6590 Uncharacterized protein | MSMEG_2606 ArsR-family protein transcriptional regulator |
| MSMEG_2805 ISMsm5, transposase (Transposase) | MSMEG_2605 Transcriptional regulator, GntR family (Transcriptional regulator, GntR family protein) |
KO_stationary.phase_rep2
Biological.replicate.5.of.7..falcarinol.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
X4XR.rep1
WT.vs..DamtR.without.N_rep2
Mycobacterium.smegmatis.Spheroplast.induced
Wild.type.rep2.x
Biological.replicate.4.of.7..ethambutol.treatment
MB100pruR.vs..MB100..rep.3
dosR.WT_Replicate1
KO_log.phase_rep1
Wild.type.rep1.y
Wild.type.rep1.x
Biological.replicate.7.of.7..falcarinol.treatment
MB100pruR.vs..MB100.rep.4
Biological.replicate.3.of.7..panaxydol.treatment
MB100pruR.vs..MB100.rep.2
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep2
rel.knockout.rep1
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.6.of.6..negative.control
DamtR.with.vs..DamtR.without.N_.rep1
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.4.of.6..kanamycin.treatment
DamtR.with.vs..DamtR.without.N_.rep2
X0.6..vs..50..air.saturation.Replicate.3
Sub.MIC.INH
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
X0.6..vs..50..air.saturation.Replicate.4
WT.vs..DamtR.N.surplus_rep1
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
mc2155.vs.Dcrp1.replicate.2
mc2155.vs.Dcrp1.replicate.3
mc2155.vs.Dcrp1.replicate.1
Biological.replicate.1.of.7..panaxydol.treatment
Biological.replicate.3.of.6..negative.control
Biological.replicate.5.of.7..panaxydol.treatment
dcpA.knockout.rep1
Biological.replicate.2.of.7..falcarinol.treatment
Biological.replicate.5.of.6..isoniazid.treatment
X2.5..vs..50..air.saturation.Replicate.4
X2.5..vs..50..air.saturation.Replicate.5
Biological.replicate.2.of.7..ethambutol.treatment
X4dbfcy5plogcy3slide480norm
X2.5..vs..50..air.saturation.Replicate.2
WT.with.vs..without.N_dye.swap_rep2
Biological.replicate.2.of.6..kanamycin.treatment
WT_stationary.phase_rep1
X4XR.rep2
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
Biological.replicate.5.of.7..ethambutol.treatment
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Slow.vs..Fast.Replicate.5
Biological.replicate.4.of.7..falcarinol.treatment
Slow.vs..Fast.Replicate.1
Biological.replicate.6.of.7..ethambutol.treatment
Biological.replicate.3.of.6..kanamycin.treatment
Biological.replicate.4.of.6..negative.control
X3dbfcy5plogcy3slide603norm
Biological.replicate.5.of.6..kanamycin.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
Wild.type.rep3
X4dbfcy5plogcy3slide901norm
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.vs..DglnR.N_starvation_rep2
X2XR.rep1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
WT.vs..DglnR.N_starvation_dye.swap_rep2
WT.vs..DamtR.N.surplus_dyeswap_rep2
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate1
Biological.replicate.2.of.6..negative.control
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
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