Module 637 Residual: 0.56
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.56 | 0.000000000043 | 0.00000027 | 78 | 32 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.000000000043 | |
| Motif 2 |
 |
| e-value: 0.00000027 |
| MSMEG_1914 ECF RNA polymerase sigma factor SigH (ECF sigma factor SigH) (Alternative RNA polymerase sigma factor SigH) (RNA polymerase sigma-H factor) (Sigma-H factor) | MSMEG_3907 RecB family protein exonuclease |
| MSMEG_1913 YbaK/ebsC protein | MSMEG_6892 Replicative DNA helicase (EC 3.6.4.12) |
| MSMEG_4012 D-hydantoinase (Dihydropyrimidinase) (DHPase) (EC 3.5.2.2) (Dihydropyrimidinase) | MSMEG_0329 FMN oxidoreductase (Flavin-dependent reductase) |
| MSMEG_0920 Uncharacterized protein | MSMEG_3347 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase |
| MSMEG_4525 Oxygen-independent coproporphyrinogen III oxidase HemN (EC 1.3.99.22) (Putative oxygen-independent coproporphyrinogen III oxidase) (EC 1.3.99.22) | MSMEG_4860 Hydrolase, alpha/beta fold family protein, putative |
| MSMEG_2315 | MSMEG_5353 Putative methyltransferase |
| MSMEG_4643 Resuscitation-promoting factor | MSMEG_5354 Hydroxyneurosporene-O-methyltransferase (EC 2.1.1.38) (O-methyltransferase, family protein 2) |
| MSMEG_3546 Uncharacterized protein | MSMEG_3995 Putative hydrolase MSMEG_3995/MSMEI_3903 (EC 3.5.-.-) |
| MSMEG_6079 DNA repair protein RadA homolog (DNA repair protein Sms homolog) | MSMEG_1563 Short-chain dehydrogenase/reductase SDR |
| MSMEG_4859 Oxidoreductase, short chain dehydrogenase/reductase family protein (Short-chain dehydrogenase/reductase SDR) | MSMEG_1561 LysR-family protein trancsriptional regulator (LysR-family transcriptional regulator) |
| MSMEG_1748 Uncharacterized protein | MSMEG_4257 Uncharacterized protein |
| MSMEG_0213 Transcriptional regulator | MSMEG_1273 Uncharacterized protein |
| MSMEG_0212 Glyoxalase/bleomycin resistance protein/dioxygenase (Lyase) | MSMEG_1232 ABC transporter substrate-binding protein (Nitrate ABC transporter, periplasmic nitrate-binding protein, putative (Putative ABC-type nitrate/sulfonate/bicarbonate transport system periplasmic component)) |
| MSMEG_0211 ABC transporter, ATP-binding protein (UvrA-like ABC transporter) | MSMEG_4011 Putative pyrimidine permease RutG (Uracil-xanthine permease) |
| MSMEG_3908 Uncharacterized protein | MSMEG_1231 Inner membrane protein YidH |
| MSMEG_3906 tRNA (Adenine-N(1)-)-methyltransferase | MSMEG_4010 Glyoxalase family protein (Uncharacterized protein) |
WT.vs..DglnR.N_starvation_rep2
WT.vs..DamtR.without.N_rep1
Wild.type.rep2.y
Biological.replicate.3.of.6..kanamycin.treatment
WT.vs..DamtR.without.N_rep2
Biological.replicate.4.of.6..negative.control
Wild.type.rep2.x
X2XR.rep1
dosR.WT_Replicate3
Tet.CarD.vs.Control..Replicates.1..2..and.3.
dosR.WT_Replicate1
KO_log.phase_rep2
KO_log.phase_rep1
WT.vs..DamtR.N.surplus_dyeswap_rep2
Wild.type.rep1.x
DglnR_without.vs..with.N_rep1
WT.vs..DamtR.without.N_.dyeswap_rep1
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.7.of.7..ethambutol.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep2
WT.vs..DamtR.N.surplus_.dyeswap_rep1
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.6.of.7..panaxydol.treatment
Biological.replicate.1.of.6..negative.control
Biological.replicate.2.of.7..panaxydol.treatment
Biological.replicate.4.of.6..kanamycin.treatment
X0.6..vs..50..air.saturation.Replicate.1
Biological.replicate.2.of.6..kanamycin.treatment
X0.6..vs..50..air.saturation.Replicate.3
Sub.MIC.INH
X0.6..vs..50..air.saturation.Replicate.5
WT.vs..DamtR.N.surplus_rep1
Biological.replicate.4.of.6..isoniazid.treatment
Plogcy5plogcy3slide113norm
mc2155.vs.Dcrp1.replicate.1
Biological.replicate.1.of.7..panaxydol.treatment
mc2155.vs.Dcrp1.replicate.4
Biological.replicate.3.of.6..negative.control
dcpA.knockout.rep1
stphcy5plogcy3slide580norm
WT_log.phase_rep2
WT_log.phase_rep1
WT.with.vs..without.N_dye.swap_rep1
X2.5..vs..50..air.saturation.Replicate.2
WT.with.vs..without.N_dye.swap_rep2
Biological.replicate.2.of.6..negative.control
WT_stationary.phase_rep1
Biological.replicate.6.of.6..isoniazid.treatment
X4XR.rep2
mc2155.vs.Dcrp1.replicate.3
Biological.replicate.5.of.7..ethambutol.treatment
Slow.vs..Fast.Replicate.4
Bedaquiline.vs..DMSO.60min
Biological.replicate.4.of.7..falcarinol.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
Biological.replicate.7.of.7..panaxydol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
Biological.replicate.5.of.6..negative.control
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
Biological.replicate.5.of.6..kanamycin.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
WT.with.vs..without.N_rep2
Bedaquiline.vs..DMSO..45min
WT.with.vs..without.N_rep1
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
X2XR.rep2
DglnR_without.vs..with.N_dyeswap_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate2
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
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