Module 649 Residual: 1.00Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)

Summary

Residual	Motif 1 e-value	Motif 2 e-value	Conditions	Genes	version
1.00			77	0	20160204

Motifs

Motif 1

Motif 2

Module Plots

Members

Conditions

KO_stationary.phase_rep1

KO_stationary.phase_rep2

WT.vs..DamtR.without.N_rep1

Wild.type.rep2.y

X4XR.rep1

Bedaquiline.vs..DMSO.15min

dosR.WT_Replicate4

MB100pruR.vs..MB100..rep.3

dosR.WT_Replicate2

dosR.WT_Replicate1

Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.

WT.vs..DamtR.N.surplus_dyeswap_rep2

Wild.type.rep1.x

DglnR_without.vs..with.N_rep1

MB100pruR.vs..MB100.rep.4

DamtR.with.vs..DamtR.without.N_.rep2

MB100pruR.vs..MB100.rep.2

DglnR_without.vs..with.N_rep2

Biological.replicate.1.of.6..kanamycin.treatment

mc2155.vs.Dcrp1.replicate.3

mc2155.pMind..vs.mc2155.pMind.6189.replicate.1

Bedaquiline.vs..DMSO.60min

Wild.type.rep3

Bedaquiline.vs..DMSO..45min

DamtR.with.vs..DamtR.without.N_.rep1

JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3

WT.vs..DamtR.without.N_.dyeswap_rep1

Biological.replicate.5.of.6..kanamycin.treatment

WT_log.phase_rep2

X0.6..vs..50..air.saturation.Replicate.3

X0.6..vs..50..air.saturation.Replicate.4

stphcy5plogcy3slide487norm

mc2155.vs.Dcrp1.replicate.1

mc2155.vs.Dcrp1.replicate.4

JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4

Biological.replicate.2.of.6..isoniazid.treatment

Plogcy5plogcy3slide111norm

stphcy5plogcy3slide580norm

X3dbfcy5plogcy3slide601norm

Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.

stphcy3plogcy5slide581norm

WT_log.phase_rep1

X4dbfcy5plogcy3slide480norm

X2.5..vs..50..air.saturation.Replicate.2

X2.5..vs..50..air.saturation.Replicate.3

WT_stationary.phase_rep2

WT.vs..DglnR.N_starvation_dye.swap_rep1

X4XR.rep2

Biological.replicate.5.of.7..ethambutol.treatment

Slow.vs..Fast.Replicate.4

dosR.WT_Replicate3

WT.with.vs..without.N_dye.swap_rep2

Biological.replicate.4.of.7..falcarinol.treatment

Slow.vs..Fast.Replicate.1

WT.vs..DglnR.N_starvation_dye.swap_rep2

BatchCulture_LBTbroth_ExponentialPhase_Replicate2

BatchCulture_LBTbroth_ExponentialPhase_Replicate3

X3dbfcy5plogcy3slide603norm

BatchCulture_LBTbroth_ExponentialPhase_Replicate1

mc2155.pMind..vs.mc2155.pMind.6189.replicate.3

Wild.type.rep2.x

WT.vs..DamtR.N.surplus_.dyeswap_rep1

WT.with.vs..without.N_rep2

Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.

WT.with.vs..without.N_rep1

DglnR_without.vs..with.N_dyeswap_rep2

Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.

DglnR_without.vs..with.N_dyeswap_rep1

JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1

WT.vs..DglnR.N_starvation_rep1

BatchCulture_LBTbroth_StationaryPhase_Replicate4

Sub.MIC.INH

BatchCulture_LBTbroth_StationaryPhase_Replicate2

BatchCulture_LBTbroth_StationaryPhase_Replicate3

BatchCulture_LBTbroth_StationaryPhase_Replicate1

Biological.replicate.2.of.6..kanamycin.treatment

Bedaquiline.vs..DMSO.120min

Comments