Module 650 Residual: 0.56
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.56 | 2.4e-26 | 0.0000000000035 | 82 | 19 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 2.4e-26 | |
| Motif 2 |
 |
| e-value: 0.0000000000035 |
| MSMEG_1382 MmpL5 protein (Transmembrane transport protein MmpL1) | MSMEG_0237 ISMsm3, transposase (Transposase IS4 family protein) |
| MSMEG_1381 MmpS5 protein | MSMEG_1613 ABC polar amino acid transporter, inner membrane subunit (Truncated polar amino acid ABC transporter) |
| MSMEG_0617 ESX-3 secretion system protein EccC3 (ESX conserved component C3) (Type VII secretion system protein EccC3) (T7SS protein EccC3) | MSMEG_1614 Glutamine transport ATP-binding protein GlnQ |
| MSMEG_2009 Regulatory protein GntR, HTH:GntR (Transcriptional regulator, GntR family) | MSMEG_2007 Putative HpcE protein |
| MSMEG_5072 ECF RNA polymerase sigma factor SigE (ECF sigma factor SigE) (Alternative RNA polymerase sigma factor SigE) (RNA polymerase sigma-E factor) (Sigma-E factor) | MSMEG_0618 PE domain protein (Pe family protein) |
| MSMEG_5073 Putative O-methyltransferase MSMEG_5073/MSMEI_4947 (EC 2.1.1.-) | MSMEG_3556 Integral membrane transporter (Putative cytosine/uracil/thiamine/allantoin permease) |
| MSMEG_2006 2,3-dihydroxybiphenyl 1,2-dioxygenase | MSMEG_3555 Hydrolase (Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase) (EC 3.5.1.6) |
| MSMEG_6146 | MSMEG_0619 PPE family protein (Ppe family protein) |
| MSMEG_1612 Extracellular solute-binding protein, family protein 3 | MSMEG_0616 ESX-3 secretion system protein EccB3 (ESX conserved component B3) (Type VII secretion system protein EccB3) (T7SS protein EccB3) |
| MSMEG_0615 ESX-3 secretion system protein EccA3 (ESX conserved component A3) (Type VII secretion system protein EccA3) (T7SS protein EccA3) |
WT.vs..DamtR.without.N_rep1
X4XR.rep1
WT.vs..DamtR.without.N_rep2
Mycobacterium.smegmatis.Spheroplast.induced
Plogcy5plogcy3slide110norm
Biological.replicate.3.of.7..falcarinol.treatment
Biological.replicate.2.of.7..falcarinol.treatment
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Biological.replicate.5.of.6..negative.control
KO_log.phase_rep1
Biological.replicate.7.of.7..falcarinol.treatment
X3dbfcy5plogcy3slide601norm
Wild.type.rep1.y
MB100pruR.vs..MB100.rep.4
Biological.replicate.6.of.6..negative.control
WT.vs..DamtR.without.N_.dyeswap_rep2
MB100pruR.vs..MB100.rep.1
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep2
Wild.type.rep3
dosR.WT_Replicate4
Biological.replicate.1.of.7..falcarinol.treatment
Bedaquiline.vs..DMSO.15min
M..smegmatis.Acid.NO.treated
Biological.replicate.3.of.7..ethambutol.treatment
X0.6..vs..50..air.saturation.Replicate.1
WT_log.phase_rep2
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.2
X0.6..vs..50..air.saturation.Replicate.5
WT.vs..DglnR.N_starvation_dye.swap_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
Biological.replicate.1.of.6..kanamycin.treatment
mc2155.vs.Dcrp1.replicate.2
Plogcy5plogcy3slide113norm
mc2155.vs.Dcrp1.replicate.1
stphcy3plogcy5slide581norm
WT.vs..DamtR.N.surplus_rep2
dcpA.knockout.rep2
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Sub.MIC.INH
WT.vs..DamtR.N.surplus_rep1
Plogcy5plogcy3slide111norm
Biological.replicate.2.of.6..isoniazid.treatment
X2.5..vs..50..air.saturation.Replicate.4
X2.5..vs..50..air.saturation.Replicate.5
X3dbfcy3plogcy5slide607norm
X2.5..vs..50..air.saturation.Replicate.1
X2.5..vs..50..air.saturation.Replicate.2
X2.5..vs..50..air.saturation.Replicate.3
Biological.replicate.2.of.6..kanamycin.treatment
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
X4XR.rep2
mc2155.vs.Dcrp1.replicate.3
Biological.replicate.5.of.7..ethambutol.treatment
Slow.vs..Fast.Replicate.4
Slow.vs..Fast.Replicate.5
Bedaquiline.vs..DMSO.60min
Biological.replicate.6.of.7..ethambutol.treatment
Biological.replicate.7.of.7..panaxydol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
X4dbfcy5plogcy3slide480norm
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
X4dbfcy5plogcy3slide901norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
WT.vs..DamtR.N.surplus_.dyeswap_rep1
Biological.replicate.1.of.7..panaxydol.treatment
Wild.type.rep1.x
WT.vs..DglnR.N_starvation_rep2
Wild.type.rep2.x
Biological.replicate.4.of.7..ethambutol.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
X4dbfcy3plogcy5slide903norm
dosR.WT_Replicate2
Bedaquiline.vs..DMSO.120min
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