Module 670 Residual: 0.51
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.51 | 5.7e-28 | 2.3e-18 | 79 | 31 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 5.7e-28 | |
| Motif 2 |
 |
| e-value: 2.3e-18 |
| MSMEG_5653 Cytosine/purine/uracil/thiamine/allantoin permease family protein (Permease for cytosine/purines uracil thiamine allantoin) | MSMEG_6662 Short chain dehydrogenase (Short-chain dehydrogenase/reductase SDR) |
| MSMEG_5655 Hydrolase, carbon-nitrogen family protein (Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase) (EC 3.5.-.-) | MSMEG_1730 IS629 transposase orfB (ISMsm1, transposase orfB) |
| MSMEG_5656 Histidinol dehydrogenase (HDH) (EC 1.1.1.23) | MSMEG_1078 Hydrolase |
| MSMEG_3090 ABC-type sugar transporter, permease protein (EC 3.6.3.17) (Ribose transport system permease protein RbsC) | MSMEG_0731 Adenylate cyclase (Uncharacterized protein) |
| MSMEG_1187 D-aminoacylase (EC 3.5.1.-) (N-acyl-D-aspartate deacylase) (EC 3.5.1.83) | MSMEG_0732 Chaperone protein ClpB |
| MSMEG_0840 Uncharacterized protein | MSMEG_1716 IS3 family protein element, transposase orfA |
| MSMEG_6933 Thioredoxin reductase (EC 1.8.1.9) | MSMEG_3991 Cyclase (Putative cyclase) |
| MSMEG_1186 Putative permease | MSMEG_0713 Putative heat shock protein transcriptional regulator Hspr (Merr family) (Transcriptional regulator, MerR family protein) |
| MSMEG_1079 Uncharacterized protein | MSMEG_0710 Protein GrpE (HSP-70 cofactor) |
| MSMEG_0709 Chaperone protein DnaK (HSP70) (Heat shock 70 kDa protein) (Heat shock protein 70) | MSMEG_0711 Chaperone protein DnaJ |
| MSMEG_3091 Ribose transport ATP-binding protein RbsA (EC 3.6.3.17) | MSMEG_0147 C-5 sterol desaturase (EC 1.3.-.-) (Sterol desaturase-related protein) |
| MSMEG_1081 Uncharacterized protein | MSMEG_4492 Amidase |
| MSMEG_6604 Transcriptional regulator, TetR family (Transcriptional regulator, TetR family protein) | MSMEG_1256 Uncharacterized protein |
| MSMEG_5096 | MSMEG_2819 |
| MSMEG_5097 Uncharacterized protein | MSMEG_2818 |
| MSMEG_4849 Carveol dehydrogenase (EC 1.1.1.275) (Short-chain dehydrogenase/reductase SDR) |
KO_stationary.phase_rep1
KO_stationary.phase_rep2
WT.vs..DamtR.without.N_rep1
KO_log.phase_rep1
Biological.replicate.3.of.6..kanamycin.treatment
WT.vs..DamtR.without.N_rep2
DamtR.with.vs..DamtR.without.N_.rep1
Wild.type.rep2.x
Biological.replicate.4.of.7..ethambutol.treatment
Biological.replicate.4.of.6..isoniazid.treatment
MB100pruR.vs..MB100..rep.3
dosR.WT_Replicate1
Biological.replicate.2.of.6..kanamycin.treatment
Wild.type.rep2.y
Plogcy5plogcy3slide110norm
Wild.type.rep1.x
Wild.type.rep1.y
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.2.of.7..ethambutol.treatment
WT.vs..DamtR.without.N_.dyeswap_rep1
Biological.replicate.1.of.6..isoniazid.treatment
mc2155.vs.Dcrp1.replicate.3
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep2
Wild.type.rep3
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.3.of.7..falcarinol.treatment
Biological.replicate.6.of.7..falcarinol.treatment
Biological.replicate.7.of.7..falcarinol.treatment
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
Biological.replicate.3.of.6..isoniazid.treatment
DamtR.with.vs..DamtR.without.N_.rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
WT.vs..DamtR.N.surplus_rep2
Biological.replicate.2.of.7..falcarinol.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
Plogcy5plogcy3slide113norm
mc2155.vs.Dcrp1.replicate.1
Biological.replicate.1.of.7..panaxydol.treatment
Biological.replicate.3.of.6..negative.control
dcpA.knockout.rep1
Biological.replicate.2.of.6..isoniazid.treatment
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
X3dbfcy5plogcy3slide601norm
WT.with.vs..without.N_dye.swap_rep1
X3dbfcy3plogcy5slide607norm
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.1
X2.5..vs..50..air.saturation.Replicate.2
X2.5..vs..50..air.saturation.Replicate.3
WT_stationary.phase_rep2
WT_stationary.phase_rep1
Biological.replicate.6.of.6..isoniazid.treatment
X4XR.rep2
Biological.replicate.5.of.7..ethambutol.treatment
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Biological.replicate.4.of.7..falcarinol.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
Biological.replicate.7.of.7..panaxydol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
Biological.replicate.5.of.6..kanamycin.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
WT.vs..DglnR.N_starvation_rep1
WT.vs..DglnR.N_starvation_rep2
DglnR_without.vs..with.N_dyeswap_rep2
X2XR.rep1
X2XR.rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate2
BatchCulture_LBTbroth_StationaryPhase_Replicate3
Biological.replicate.2.of.6..negative.control
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
Biological.replicate.6.of.7..panaxydol.treatment
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