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[+] Show/hide bicluster #230 rows and columns.
bicluster 230
Phaeodactylum tricornutum
28x79
[+] Show/hide bicluster #230 rows (genes).
bicluster 230 genes
Phaeodactylum tricornutum
28
[+] Show/hide bicluster #230 rows (short gene names).
bicluster 230 short names
Phaeodactylum tricornutum
28
short_name
[+] Show/hide bicluster #230 rows (long gene names).
bicluster 230 long names
Phaeodactylum tricornutum
28
long_name
[+] Show/hide bicluster #230 rows (NCBI RefSeq gene IDs).
bicluster 230 NCBI RefSeq IDs
Phaeodactylum tricornutum
0
[+] Show/hide bicluster #230 gene upstream sequences.
bicluster 230 upstream sequences
Phaeodactylum tricornutum
27
upstream
[+] Show/hide bicluster #230 columns (arrays; conditions).
bicluster 230 arrays
Phaeodactylum tricornutum
79
[+] Show/hide bicluster #230 ratios.
bicluster 230 ratios
Phaeodactylum tricornutum
28x79
GENES GSE12015_Si_free_11v18_1 GSE12015_Si_free_11v18_2 GSE12015_Si_free_23v20_1 GSE12015_Si_free_23v20_2 GSE17237_highlight_12hr_1 GSE17237_highlight_12hr_2 GSE17237_highlight_12hr_3 GSE17237_highlight_24hr_1 GSE17237_highlight_24hr_3 GSE17237_highlight_24hr_3.1 GSE17237_highlight_30min_1 GSE17237_highlight_30min_2 GSE17237_highlight_3hr_1 GSE17237_highlight_3hr_2 GSE17237_highlight_48hr_3 GSE17237_highlight_6hr_1 GSE17237_highlight_6hr_3 GSE31131_Cadmium_0.12mg_2 GSE31131_Cadmium_1.2mg_1 GSE31131_Cadmium_1.2mg_2 GSE31131_Cadmium_1.2mg_3 GSE34988_Ammonia_1 GSE34988_Ammonia_2 GSE34988_Ammonia_3 GSE34988_Ammonia_4 GSE34988_Ammonia_5 GSE34988_Cadmium_1 GSE34988_Cadmium_2 GSE34988_Control_1 GSE34988_Control_6 GSE34988_Copper_4 GSE34988_Copper_5 GSE34988_Dispersant_2 GSE34988_Dispersant_3 GSE34988_Dispersed_oil_1 GSE34988_Dispersed_oil_5 GSE34988_Mixture_1 GSE34988_Mixture_2 GSE34988_Mixture_3 GSE34988_Mixture_4 GSE34988_Mixture_5 GSE34988_Oil_3 GSE34988_Oil_5 GSE34988_Salinity_15ppt_4 GSE34988_Silver_1 GSE34988_Silver_3 GSE34988_Simazine_1 GSE42039_light_24h_1 GSE42039_light_24h_2 GSE42039_light_24h_3 GSE42039_light_6h_1 GSE42039_light_6h_2 GSE42039_light_6h_3 GSE42514_dark_8hr_light_3hr_1 GSE42514_dark_8hr_light_3hr_2 GSE42514_light_0.5hr_2 GSE42514_light_10.5hr_1 GSE42514_light_10.5hr_2 GSE42514_light_15.5hr_2 GSE42514_light_16hr_dark_30min_2 GSE42514_light_16hr_dark_7.5hr_1 GSE42514_light_16hr_dark_7.5hr_2 GSE42514_light_6hr_1 GSE42514_light_6hr_2 GSE55959_BlueLight_24h_rep1 GSE55959_BlueLight_24h_rep2 GSE55959_BlueLight_6h_rep1 GSE55959_BlueLight_6h_rep2 GSE55959_BlueLight_6h_rep3 GSE55959_GreenLight_0.5h_rep2 GSE55959_GreenLight_0.5h_rep3 GSE55959_GreenLight_24h_rep3 GSE55959_GreenLight_6h_rep1 GSE55959_GreenLight_6h_rep2 GSE55959_GreenLight_6h_rep3 GSE55959_RedLight_24h_rep3 GSE55959_RedLight_6h_rep1 GSE55959_RedLight_6h_rep2 GSE55959_RedLight_6h_rep3
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51303 0.0138067345959756 0.162325310487836 0.305201389602259 0.437397028387958 2.2343267039052 1.43991958260964 0.972658378937709 0.946082219115974 0.781313252505091 1.25376555321227 0.897548686120322 0.484008082124441 -0.382292508825359 0.250586051151496 1.02794880182434 1.13783844174238 1.13452145970821 0.165446820312212 -0.553737758230404 0.0898474393816402 -0.334071328329887 3.13171866540342 3.40542540287776 2.96960711325697 2.57224233841556 2.76796080288617 -0.970870814815546 -0.657345481377184 0.0289902240556549 0.000576998269718388 0.30184104514829 0.193835575966663 -0.279094200878532 -0.418927090039027 -0.359279561368516 -0.759171388847032 2.57991623479174 2.79091407674131 2.64741732298137 2.57335894822426 2.51072380819308 -0.531604556628261 0.187629000801562 -0.413367044245749 -0.663868207651903 -0.273979388384543 0.00082500615486101 0.312957143167676 0.373497405834727 0.35597969026669 -0.736128769899839 -0.659065971760394 -0.896799566517313 -1.82523965433143 -1.31659355103981 0.0722673058336886 -2.00702898946276 -1.75742426929782 -0.480316463863144 0.0116126956641632 0.194702719865271 -0.098170182891751 -2.78848118509812 -1.4959422966423 0 0.0832270540245843 -1.22013013405691 -1.10147802683059 -0.893204172043405 0.196699522707839 0.368275120799825 0.0595643336138457 -1.0040124228254 -0.856844640296485 -0.78477628620779 -0.0851033904164613 -1.12234780714794 -1.20230767130033 -1.11724100119335
52094 0.3962509210609 0.146328245049612 0.0633499652672089 0.0551179930665736 2.10001232905974 1.44029219853419 1.09973221580503 0.980441060251182 1.1657229977542 1.35675743743102 0.808596994168481 0.423406550956355 -0.489259035772557 0.370626437994762 1.0941180107642 0.852743414686048 0.861288201830307 0.0420884274674081 0.00224897480521356 -0.0904957167960238 -0.0595237445883536 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -0.0167633347595622 0.0896738379974494 0.390019523946731 -0.906231876475098 -0.750990027304958 -0.667895132039214 -1.29946515721252 -0.950834856784231 1.03384891480651 -2.05990001611462 -1.63371771595148 0.311130451615134 0.476253597779139 0.12959057413645 -0.119455369963028 -2.5794388617675 -0.84569672336894 -0.0271535898884229 0.271725484469483 -1.27589457788893 -1.1825877187948 -1.06608102055606 -0.0189649345394891 0.256851293396711 0.123730427608482 -1.03348954570309 -0.95188367926387 -0.926912990535619 -0.178133625530683 -1.07965653810997 -1.16626015985229 -1.15298677688208
8842 0.282249122556323 0.164032605084862 0.1265244013933 0.32107084310868 1.88204698316039 1.71012368017742 0.781189961592107 1.07100286229452 0.92709103609957 1.5032900179609 0.69745180225331 0.497778266391298 -0.397968718974463 0.0968214067812113 0.862483520106648 0.711259783386613 0.807471974513416 -0.14555894061475 -0.417614552822406 -0.282885668947585 -0.316199375463679 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.650312502668846 0.695824527923325 0.434037028062064 -1.00277727308377 -1.03436068918718 -0.981401458847212 -1.44519068047547 -0.793710920276233 0.829048826013172 -2.60178788515519 -2.16982180548156 -0.0629784703645064 -0.0716423429846932 0.0222599827598097 -0.129698585102233 -2.22880052208309 -1.09812175425212 0.474186590945454 0.333542141792764 -1.09037807191364 -0.642855980923337 -0.792761305458775 0.236049146312549 0.352297244476054 0.210251879824671 -0.878107054662062 -0.709064699297734 -0.999531526837134 -0.299259282998035 -1.77564025695517 -1.6316195117717 -1.75314307589592
[+] Show/hide bicluster #230 motif PSSM #1. bicluster 230 motif PSSM #1 Phaeodactylum tricornutum 14x4
POSITION A C G T
1 0 0.666667 0.333333 0
2 0 0.333333 0.666667 0
3 1 0 0 0
4 0 0 1 0
5 0 1 0 0
6 0 1 0 0
7 0 0 0 1
8 0 0 1 0
9 0 1 0 0
10 0 0 1 0
11 0 1 0 0
12 0 0 0 1
13 0 0 1 0
14 0 1 0 0 [+] Show/hide bicluster #230 motif PSSM #2. bicluster 230 motif PSSM #2 Phaeodactylum tricornutum 11x4
POSITION A C G T
1 0.333333 0.555556 0 0.111111
2 1 0 0 0
3 0 0 1 0
4 0.388889 0.111111 0.444444 0.055556
5 0.722222 0.277778 0 0
6 0.055556 0 0.944444 0
7 0.777778 0.222222 0 0
8 0.444444 0.555556 0 0
9 0.388889 0 0.611111 0
10 1 0 0 0
11 0 0.611111 0 0.388889 |