******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.10.0 (Release date: Wed May 21 10:35:36 2014 +1000) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme.nbcr.net. This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme.nbcr.net. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= motifs/500/500.seqs.fa ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ 8765 1.0000 500 3639 1.0000 500 47285 1.0000 500 37569 1.0000 500 37590 1.0000 500 48479 1.0000 500 5851 1.0000 500 40831 1.0000 500 50356 1.0000 500 33726 1.0000 500 54222 1.0000 500 41845 1.0000 500 44610 1.0000 500 5738 1.0000 500 48340 1.0000 500 34382 1.0000 500 14427 1.0000 500 49607 1.0000 500 47408 1.0000 500 45438 1.0000 500 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme motifs/500/500.seqs.fa -oc motifs/500 -dna -minw 12 -maxw 21 -nmotifs 3 -maxsize 500000 model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 12 maxw= 21 minic= 0.00 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 20 wnsites= 0.8 theta: prob= 1 spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 10000 N= 20 strands: + sample: seed= 0 seqfrac= 1 Letter frequencies in dataset: A 0.255 C 0.249 G 0.241 T 0.254 Background letter frequencies (from dataset with add-one prior applied): A 0.255 C 0.250 G 0.241 T 0.254 ******************************************************************************** ******************************************************************************** MOTIF 1 MEME width = 21 sites = 19 llr = 207 E-value = 7.1e+000 ******************************************************************************** -------------------------------------------------------------------------------- Motif 1 Description -------------------------------------------------------------------------------- Simplified A 444::21:2643:3231::3: pos.-specific C 5:55:2352147::4411117 probability G :5133155321:a61:::3:: matrix T 21:2751:3211:13389773 bits 2.1 * 1.8 * 1.6 * 1.4 * * Relative 1.2 * ** Entropy 1.0 * * * ** * (15.7 bits) 0.8 ** * * ** ***** 0.6 ***** * *** ***** 0.4 ***** * * *** ****** 0.2 ******** ************ 0.0 --------------------- Multilevel CGCCTTGGGACCGGCCTTTTC consensus AAAGGACCTTAA ATA GAT sequence T A AT C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- --------------------- 5851 380 1.92e-10 CAGAAATTGG AGCCTTCGCACCGGCCTTTTC GGTGAGCAGG 47285 381 9.70e-09 ACCCCGCCTT CAACGTGCAACCGATCTTTTC GTTCGTTCAT 33726 287 2.46e-08 CACTCCGTGA CACCTTGGATACGAACTTTTC CAATGAAAAC 40831 198 4.11e-08 CCAACTTTCT AGCGTAGCGAACGACTTTTTC CCCTTGCTGT 3639 419 1.05e-07 CGACGTCGAT CACGTTGGCTTCGGCCTTTTC CATTGCGCCT 54222 109 8.34e-07 GCACACACCT CGCTTTGGTAACGGGATTCTC GAATCCCCCA 37590 174 1.96e-06 GCTCATAAAC TGACGACGTACAGGCTTTTAC TGGTCTCAAA 48340 449 3.19e-06 AGCAGTGTCA AGATTGACTACCGGACTTGTC AGACTTATTG 37569 453 3.84e-06 GGACAGTCCA AACCTAGGGACAGGCATCGAC TGAAGCATTG 50356 38 5.49e-06 GTCGCAGACC AGCTGTTGCATCGGTTTTTAC ACTACATTAG 34382 366 9.76e-06 GCCAAAACAG CAAGTCGCGGAAGTTCTTTTT TTGAGCTCTA 44610 303 1.06e-05 TTCGTGCTTC AACTTTCGGTCCGTAAATTTC TGAGGTGTCG 8765 156 1.14e-05 GGATACTTGC CGGCGCGCAACCGGTATTGAT GTGATATTGA 49607 414 1.23e-05 TGCCATTTCC TGCCTAACGGAAGATATTTTT TGACACTGCA 14427 77 1.23e-05 AGATTCGTCG AGACGCCGCCGCGGCCTTGTC CAACGTGGGT 45438 414 2.03e-05 TGGGCTATGC CTAGGTCCAACCGGACATTTT ACTGAATGCG 48479 457 2.83e-05 CTCGGCACTT CAACTTGCGAGAGACTCCTTC GACTCTCCCT 41845 113 4.35e-05 CACACGACAC TACGTTTCTTACGATTTTTCT GTGTTGAAGA 47408 209 7.11e-05 TTTAGAAAAA CGACTGCGTGATGGGATTGAT TAGCTAGAGT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 5851 1.9e-10 379_[+1]_100 47285 9.7e-09 380_[+1]_99 33726 2.5e-08 286_[+1]_193 40831 4.1e-08 197_[+1]_282 3639 1e-07 418_[+1]_61 54222 8.3e-07 108_[+1]_371 37590 2e-06 173_[+1]_306 48340 3.2e-06 448_[+1]_31 37569 3.8e-06 452_[+1]_27 50356 5.5e-06 37_[+1]_442 34382 9.8e-06 365_[+1]_114 44610 1.1e-05 302_[+1]_177 8765 1.1e-05 155_[+1]_324 49607 1.2e-05 413_[+1]_66 14427 1.2e-05 76_[+1]_403 45438 2e-05 413_[+1]_66 48479 2.8e-05 456_[+1]_23 41845 4.3e-05 112_[+1]_367 47408 7.1e-05 208_[+1]_271 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 1 width=21 seqs=19 5851 ( 380) AGCCTTCGCACCGGCCTTTTC 1 47285 ( 381) CAACGTGCAACCGATCTTTTC 1 33726 ( 287) CACCTTGGATACGAACTTTTC 1 40831 ( 198) AGCGTAGCGAACGACTTTTTC 1 3639 ( 419) CACGTTGGCTTCGGCCTTTTC 1 54222 ( 109) CGCTTTGGTAACGGGATTCTC 1 37590 ( 174) TGACGACGTACAGGCTTTTAC 1 48340 ( 449) AGATTGACTACCGGACTTGTC 1 37569 ( 453) AACCTAGGGACAGGCATCGAC 1 50356 ( 38) AGCTGTTGCATCGGTTTTTAC 1 34382 ( 366) CAAGTCGCGGAAGTTCTTTTT 1 44610 ( 303) AACTTTCGGTCCGTAAATTTC 1 8765 ( 156) CGGCGCGCAACCGGTATTGAT 1 49607 ( 414) TGCCTAACGGAAGATATTTTT 1 14427 ( 77) AGACGCCGCCGCGGCCTTGTC 1 45438 ( 414) CTAGGTCCAACCGGACATTTT 1 48479 ( 457) CAACTTGCGAGAGACTCCTTC 1 41845 ( 113) TACGTTTCTTACGATTTTTCT 1 47408 ( 209) CGACTGCGTGATGGGATTGAT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 9600 bayes= 9.17321 E= 7.1e+000 53 92 -1089 -69 72 -1089 113 -227 72 108 -219 -1089 -1089 108 13 -27 -1089 -1089 39 143 -28 -66 -119 105 -128 34 98 -127 -1089 92 113 -1089 -28 -24 39 5 118 -224 -61 -27 53 75 -119 -127 4 145 -1089 -227 -1089 -1089 205 -1089 31 -1089 127 -127 -28 56 -119 31 31 75 -1089 5 -128 -224 -1089 173 -1089 -124 -1089 181 -1089 -224 13 143 4 -224 -1089 143 -1089 145 -1089 31 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 19 E= 7.1e+000 0.368421 0.473684 0.000000 0.157895 0.421053 0.000000 0.526316 0.052632 0.421053 0.526316 0.052632 0.000000 0.000000 0.526316 0.263158 0.210526 0.000000 0.000000 0.315789 0.684211 0.210526 0.157895 0.105263 0.526316 0.105263 0.315789 0.473684 0.105263 0.000000 0.473684 0.526316 0.000000 0.210526 0.210526 0.315789 0.263158 0.578947 0.052632 0.157895 0.210526 0.368421 0.421053 0.105263 0.105263 0.263158 0.684211 0.000000 0.052632 0.000000 0.000000 1.000000 0.000000 0.315789 0.000000 0.578947 0.105263 0.210526 0.368421 0.105263 0.315789 0.315789 0.421053 0.000000 0.263158 0.105263 0.052632 0.000000 0.842105 0.000000 0.105263 0.000000 0.894737 0.000000 0.052632 0.263158 0.684211 0.263158 0.052632 0.000000 0.684211 0.000000 0.684211 0.000000 0.315789 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 regular expression -------------------------------------------------------------------------------- [CA][GA][CA][CGT][TG][TA][GC][GC][GTAC][AT][CA][CA]G[GA][CTA][CAT]TT[TG][TA][CT] -------------------------------------------------------------------------------- Time 3.92 secs. ******************************************************************************** ******************************************************************************** MOTIF 2 MEME width = 12 sites = 18 llr = 166 E-value = 1.4e+001 ******************************************************************************** -------------------------------------------------------------------------------- Motif 2 Description -------------------------------------------------------------------------------- Simplified A 681:97893954 pos.-specific C ::8111117:23 probability G 2::9:2:::131 matrix T 221:::1::::1 bits 2.1 1.8 1.6 * * * 1.4 ** * * Relative 1.2 **** ** * Entropy 1.0 **** **** (13.3 bits) 0.8 ********* 0.6 ********** 0.4 *********** 0.2 ************ 0.0 ------------ Multilevel AACGAAAACAAA consensus T A GC sequence C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ------------ 48479 418 2.71e-07 CACTCCCCGG AACGAAAAAAAA AAATCCGAAG 49607 85 9.36e-07 GTCAAAACAG AACGAAAACAAG GTGGCCGACG 33726 309 3.76e-06 GAACTTTTCC AATGAAAACAAC GGACCAGCAC 34382 89 4.09e-06 TTCTTGGACC AACCAAAACAAC CCATCAAAAG 47408 364 7.24e-06 GAAACTAGCC AATGAAAACACA ATGATCTCTT 5738 27 7.24e-06 CAGACCGCGA AACGCAAACACA GGTATCGAAT 37569 297 7.24e-06 TGATGTGCCT TACGAAAACAGT GAGGAACGCA 48340 198 1.05e-05 AGTAGATAGA GACGAGAACAGA CTGTCGTGTT 14427 379 2.66e-05 GCCGACGACT TACGACAAAAGA TTGCCAAAAA 40831 480 3.16e-05 CAAAGGTGAG ATCGAAAAAAGT CCCTGGGCG 41845 214 3.34e-05 CCACCGACAA AACGAAACAACA CCCATTCCAG 3639 116 3.60e-05 GAACGATTGG AACGAGTAAAAC ACGTATCCGC 44610 25 3.90e-05 GCTTGGCGAA AACGAGTACACC ATAGTGGTGC 37590 387 4.95e-05 CCTTCTCCGA TTCCAAAACAAA TTCTGCACTC 8765 42 4.95e-05 CCAGACTCGG AACGCAAACGAA CGTTGCTCGC 50356 178 5.79e-05 GGCATCTTTC GAAGAAAAAAAC AAAATTGTTT 5851 421 5.79e-05 CAAACGTCGC GACGACAACAGG TTTTCCAACC 54222 376 9.97e-05 CTTGACTATT TTCGAACACAAC GCTGTGTTTT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 48479 2.7e-07 417_[+2]_71 49607 9.4e-07 84_[+2]_404 33726 3.8e-06 308_[+2]_180 34382 4.1e-06 88_[+2]_400 47408 7.2e-06 363_[+2]_125 5738 7.2e-06 26_[+2]_462 37569 7.2e-06 296_[+2]_192 48340 1.1e-05 197_[+2]_291 14427 2.7e-05 378_[+2]_110 40831 3.2e-05 479_[+2]_9 41845 3.3e-05 213_[+2]_275 3639 3.6e-05 115_[+2]_373 44610 3.9e-05 24_[+2]_464 37590 4.9e-05 386_[+2]_102 8765 4.9e-05 41_[+2]_447 50356 5.8e-05 177_[+2]_311 5851 5.8e-05 420_[+2]_68 54222 0.0001 375_[+2]_113 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 2 width=12 seqs=18 48479 ( 418) AACGAAAAAAAA 1 49607 ( 85) AACGAAAACAAG 1 33726 ( 309) AATGAAAACAAC 1 34382 ( 89) AACCAAAACAAC 1 47408 ( 364) AATGAAAACACA 1 5738 ( 27) AACGCAAACACA 1 37569 ( 297) TACGAAAACAGT 1 48340 ( 198) GACGAGAACAGA 1 14427 ( 379) TACGACAAAAGA 1 40831 ( 480) ATCGAAAAAAGT 1 41845 ( 214) AACGAAACAACA 1 3639 ( 116) AACGAGTAAAAC 1 44610 ( 25) AACGAGTACACC 1 37590 ( 387) TTCCAAAACAAA 1 8765 ( 42) AACGCAAACGAA 1 50356 ( 178) GAAGAAAAAAAC 1 5851 ( 421) GACGACAACAGG 1 54222 ( 376) TTCGAACACAAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 12 n= 9780 bayes= 9.21757 E= 1.4e+001 126 -1081 -53 -19 171 -1081 -1081 -61 -220 174 -1081 -119 -1081 -117 188 -1081 180 -117 -1081 -1081 150 -117 -53 -1081 171 -216 -1081 -119 189 -216 -1081 -1081 38 142 -1081 -1081 189 -1081 -211 -1081 97 -17 21 -1081 80 42 -111 -119 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 12 nsites= 18 E= 1.4e+001 0.611111 0.000000 0.166667 0.222222 0.833333 0.000000 0.000000 0.166667 0.055556 0.833333 0.000000 0.111111 0.000000 0.111111 0.888889 0.000000 0.888889 0.111111 0.000000 0.000000 0.722222 0.111111 0.166667 0.000000 0.833333 0.055556 0.000000 0.111111 0.944444 0.055556 0.000000 0.000000 0.333333 0.666667 0.000000 0.000000 0.944444 0.000000 0.055556 0.000000 0.500000 0.222222 0.277778 0.000000 0.444444 0.333333 0.111111 0.111111 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 regular expression -------------------------------------------------------------------------------- [AT]ACGAAAA[CA]A[AGC][AC] -------------------------------------------------------------------------------- Time 8.15 secs. ******************************************************************************** ******************************************************************************** MOTIF 3 MEME width = 21 sites = 7 llr = 114 E-value = 1.2e+002 ******************************************************************************** -------------------------------------------------------------------------------- Motif 3 Description -------------------------------------------------------------------------------- Simplified A ::3::43:::1:1::4::::: pos.-specific C 6::1::6:9:6111::1:::: probability G 39::94171a39139:6469a matrix T 117911:3::::66163641: bits 2.1 * * 1.8 * * 1.6 * * 1.4 * ** ** * * ** Relative 1.2 * ** *** * * ** Entropy 1.0 **** *** * ** **** (23.5 bits) 0.8 **** *** * ** **** 0.6 ************ ******** 0.4 ********************* 0.2 ********************* 0.0 --------------------- Multilevel CGTTGACGCGCGTTGTGTGGG consensus G A GAT G G ATGT sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- --------------------- 37590 96 2.57e-10 TTCTCGCACG CGTTGAAGCGCGTTGTGTGTG AGAGATAATT 14427 341 2.44e-09 GCACAGACAC CTTTGACGCGGGTGGAGGTGG TGCCGTTGCC 48479 345 5.57e-09 AAAGCGGGAA CGACGACGCGGGGTGTGTGGG AAGAAAGAAA 33726 163 2.66e-08 AAAAGCGCAA TGTTGGATCGCGCCGTGGGGG ATTCGAGAAT 37569 179 4.15e-08 CAGTTGGTGT CGATGGCGCGAGATTTTTTGG CCTTGCGCGC 8765 126 5.88e-08 TGTACGTTCT GGTTTTGGCGCGTGGATTTGG GATACTTGCC 5851 348 7.15e-08 CATAGTTTTC GGTTGGCTGGCCTTGACGGGG GCAGAAATTG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 37590 2.6e-10 95_[+3]_384 14427 2.4e-09 340_[+3]_139 48479 5.6e-09 344_[+3]_135 33726 2.7e-08 162_[+3]_317 37569 4.2e-08 178_[+3]_301 8765 5.9e-08 125_[+3]_354 5851 7.1e-08 347_[+3]_132 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 3 width=21 seqs=7 37590 ( 96) CGTTGAAGCGCGTTGTGTGTG 1 14427 ( 341) CTTTGACGCGGGTGGAGGTGG 1 48479 ( 345) CGACGACGCGGGGTGTGTGGG 1 33726 ( 163) TGTTGGATCGCGCCGTGGGGG 1 37569 ( 179) CGATGGCGCGAGATTTTTTGG 1 8765 ( 126) GGTTTTGGCGCGTGGATTTGG 1 5851 ( 348) GGTTGGCTGGCCTTGACGGGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 9600 bayes= 11.0265 E= 1.2e+002 -945 119 25 -83 -945 -945 183 -83 16 -945 -945 149 -945 -80 -945 175 -945 -945 183 -83 75 -945 83 -83 16 119 -75 -945 -945 -945 157 17 -945 178 -75 -945 -945 -945 205 -945 -84 119 25 -945 -945 -80 183 -945 -84 -80 -75 117 -945 -80 25 117 -945 -945 183 -83 75 -945 -945 117 -945 -80 125 17 -945 -945 83 117 -945 -945 125 75 -945 -945 183 -83 -945 -945 205 -945 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 7 E= 1.2e+002 0.000000 0.571429 0.285714 0.142857 0.000000 0.000000 0.857143 0.142857 0.285714 0.000000 0.000000 0.714286 0.000000 0.142857 0.000000 0.857143 0.000000 0.000000 0.857143 0.142857 0.428571 0.000000 0.428571 0.142857 0.285714 0.571429 0.142857 0.000000 0.000000 0.000000 0.714286 0.285714 0.000000 0.857143 0.142857 0.000000 0.000000 0.000000 1.000000 0.000000 0.142857 0.571429 0.285714 0.000000 0.000000 0.142857 0.857143 0.000000 0.142857 0.142857 0.142857 0.571429 0.000000 0.142857 0.285714 0.571429 0.000000 0.000000 0.857143 0.142857 0.428571 0.000000 0.000000 0.571429 0.000000 0.142857 0.571429 0.285714 0.000000 0.000000 0.428571 0.571429 0.000000 0.000000 0.571429 0.428571 0.000000 0.000000 0.857143 0.142857 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 regular expression -------------------------------------------------------------------------------- [CG]G[TA]TG[AG][CA][GT]CG[CG]GT[TG]G[TA][GT][TG][GT]GG -------------------------------------------------------------------------------- Time 11.70 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 8765 7.69e-07 41_[+2(4.95e-05)]_72_[+3(5.88e-08)]_\ 9_[+1(1.14e-05)]_324 3639 4.03e-05 115_[+2(3.60e-05)]_291_\ [+1(1.05e-07)]_61 47285 7.46e-05 380_[+1(9.70e-09)]_99 37569 3.68e-08 178_[+3(4.15e-08)]_97_\ [+2(7.24e-06)]_144_[+1(3.84e-06)]_27 37590 1.06e-09 95_[+3(2.57e-10)]_57_[+1(1.96e-06)]_\ 192_[+2(4.95e-05)]_102 48479 1.76e-09 219_[+2(4.53e-05)]_113_\ [+3(5.57e-09)]_52_[+2(2.71e-07)]_27_[+1(2.83e-05)]_23 5851 4.26e-11 347_[+3(7.15e-08)]_11_\ [+1(1.92e-10)]_20_[+2(5.79e-05)]_68 40831 1.16e-05 197_[+1(4.11e-08)]_28_\ [+2(6.17e-05)]_221_[+2(3.16e-05)]_9 50356 6.02e-04 37_[+1(5.49e-06)]_119_\ [+2(5.79e-05)]_311 33726 1.24e-10 162_[+3(2.66e-08)]_103_\ [+1(2.46e-08)]_1_[+2(3.76e-06)]_180 54222 1.32e-03 108_[+1(8.34e-07)]_246_\ [+2(9.97e-05)]_113 41845 7.43e-03 112_[+1(4.35e-05)]_80_\ [+2(3.34e-05)]_275 44610 1.62e-03 24_[+2(3.90e-05)]_266_\ [+1(1.06e-05)]_177 5738 5.88e-02 26_[+2(7.24e-06)]_462 48340 3.36e-04 197_[+2(1.05e-05)]_239_\ [+1(3.19e-06)]_31 34382 1.19e-04 88_[+2(4.09e-06)]_265_\ [+1(9.76e-06)]_114 14427 2.60e-08 76_[+1(1.23e-05)]_243_\ [+3(2.44e-09)]_17_[+2(2.66e-05)]_110 49607 1.17e-04 84_[+2(9.36e-07)]_317_\ [+1(1.23e-05)]_66 47408 3.10e-03 208_[+1(7.11e-05)]_134_\ [+2(7.24e-06)]_125 45438 7.78e-02 413_[+1(2.03e-05)]_66 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because nmotifs = 3 reached. ******************************************************************************** CPU: seaotter.hsd1.wa.comcast.net ********************************************************************************