PITA_121 megaCluster: 11 Residual: 0.07 | Macrophage Network Portal

Summary

Title	Cluster	Residual	Bicluster Conditions	Residual Permutation P-Value	Var. Exp. First PC	Var. Exp. First PC Perm. P-Value
PITA_121	11	0.07	15	0	0.992476	0

Members

Displaying 1 - 9 of 9

12704 citron Details for - - citron GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 12704 Tuberculist Genomic Region	15366 hyaluronan mediated motility receptor (RHAMM) Details for RP23-382C18.3 - hyaluronan mediated motility receptor (RHAMM) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 15366 Tuberculist Genomic Region
18817 polo-like kinase 1 Details for - - polo-like kinase 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 18817 Tuberculist Genomic Region	208628 kinetochore associated 1 Details for - - kinetochore associated 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 208628 Tuberculist Genomic Region
209737 kinesin family member 15 Details for - - kinesin family member 15 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 209737 Tuberculist Genomic Region	54141 sperm associated antigen 5 Details for RP23-185A18.13-001 - sperm associated antigen 5 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 54141 Tuberculist Genomic Region
108912 cell division cycle associated 2 Details for - - cell division cycle associated 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 108912 Tuberculist Genomic Region	16571 kinesin family member 4 Details for RP23-213F21.3 - kinesin family member 4 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 16571 Tuberculist Genomic Region
56419 diaphanous homolog 3 (Drosophila) Details for - - diaphanous homolog 3 (Drosophila) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 56419 Tuberculist Genomic Region

TFBS DB TF

TFs	percTargets	pValue
Klf7.1, V_SP1_Q6_M00196, V_KLF7_03_M02773	1, 1, 1	0

GO Terms

Displaying 1 - 1 of 1

GO Terms
NA

Upstream MEME Motif

Motif1 E-Value	Motif1 Consensus	Motif1 Matches	Motif2 E-Value	Motif2 Consensus	Motif2 Matches
29	CNNCAGCCAATC	NFYA_MA0060.1, V$NFY_C_M00209, V$NFY_Q6_01_M00775, V$NFY_01_M00287, V$ALPHACP1_01_M00687, V$NFYA_Q5_M02106, V$NFYC_Q5_M02107, V$CAAT_01_M00254, V$HOXA7_01_M01108, V$NFY_Q6_M00185, V$ACAAT_B_M00309, Duxl.1, Pitx3.1	56	AMACWYACAAAC	NA

Upstream Weeder Motif

Motif1 Score	Motif1 Consensus	Motif1 Matches	Motif2 Score	Motif2 Consensus	Motif2 Matches
1.62	GATTGG	NA	2.28	CGGGATTG	NA

3p UTR Weeder

Motif1 E-Value	Motif1 Consensus	Motif1 Matches	Motif1 Model	Motif2 E-Value	Motif2 Consensus	Motif2 Matches	Motif2 Model
1.03	GTCTCN	NA	NA	1.49	AGTCTNNA	NA	NA

3p UTR PITA

miRNAs	percTargets	pValue
NA

3p UTR TargetScan

miRNAs	percTargets	pValue
NA

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