PITA_20 megaCluster: 11 Residual: 0.20 | Macrophage Network Portal

Summary

Title	Cluster	Residual	Bicluster Conditions	Residual Permutation P-Value	Var. Exp. First PC	Var. Exp. First PC Perm. P-Value
PITA_20	11	0.20	15	0	0.918881	0

Members

Displaying 1 - 22 of 22

110006 glucuronidase, beta Details for - - glucuronidase, beta GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 110006 Tuberculist Genomic Region	110095 liver glycogen phosphorylase Details for - - liver glycogen phosphorylase GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 110095 Tuberculist Genomic Region
12763 cytidine monophospho-N-acetylneuraminic acid hydroxylase Details for RP23-80C18.1 - cytidine monophospho-N-acetylneuraminic acid hydroxylase GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 12763 Tuberculist Genomic Region	13605 ect2 oncogene Details for - - ect2 oncogene GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 13605 Tuberculist Genomic Region
14635 galactokinase 1 Details for RP23-42F6.2 - galactokinase 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 14635 Tuberculist Genomic Region	14661 glutamate dehydrogenase 1 Details for - - glutamate dehydrogenase 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 14661 Tuberculist Genomic Region
15452 hypoxanthine guanine phosphoribosyl transferase Details for RP23-173F3.3 - hypoxanthine guanine phosphoribosyl transferase GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 15452 Tuberculist Genomic Region	18002 neural precursor cell expressed, developmentally down-regulated gene 8 Details for - - neural precursor cell expressed, developmentally down-regulated gene 8 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 18002 Tuberculist Genomic Region
19352 RAB geranylgeranyl transferase, b subunit Details for - - RAB geranylgeranyl transferase, b subunit GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 19352 Tuberculist Genomic Region	195434 UTP14, U3 small nucleolar ribonucleoprotein, homolog B (yeast) Details for - - UTP14, U3 small nucleolar ribonucleoprotein, homolog B (yeast) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 195434 Tuberculist Genomic Region
20133 ribonucleotide reductase M1 Details for - - ribonucleotide reductase M1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 20133 Tuberculist Genomic Region	20250 stearoyl-Coenzyme A desaturase 2 Details for - - stearoyl-Coenzyme A desaturase 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 20250 Tuberculist Genomic Region
212285 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 Details for - - ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 212285 Tuberculist Genomic Region	21973 topoisomerase (DNA) II alpha Details for RP23-333D2.5 - topoisomerase (DNA) II alpha GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 21973 Tuberculist Genomic Region
232910 adaptor-related protein complex 2, sigma 1 subunit Details for - - adaptor-related protein complex 2, sigma 1 subunit GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 232910 Tuberculist Genomic Region	66442 SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae) Details for RP23-431D4.3 - SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 66442 Tuberculist Genomic Region
66904 propionyl Coenzyme A carboxylase, beta polypeptide Details for - - propionyl Coenzyme A carboxylase, beta polypeptide GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 66904 Tuberculist Genomic Region	67515 tetratricopeptide repeat domain 33 Details for - - tetratricopeptide repeat domain 33 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 67515 Tuberculist Genomic Region
74107 centrosomal protein 55 Details for - - centrosomal protein 55 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 74107 Tuberculist Genomic Region	12235 budding uninhibited by benzimidazoles 1 homolog (S. cerevisiae) Details for RP23-189N15.7 - budding uninhibited by benzimidazoles 1 homolog (S. cerevisiae) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 12235 Tuberculist Genomic Region
211651 Fanconi anemia, complementation group D2 Details for - - Fanconi anemia, complementation group D2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 211651 Tuberculist Genomic Region	66868 major facilitator superfamily domain containing 1 Details for - - major facilitator superfamily domain containing 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 66868 Tuberculist Genomic Region

TFBS DB TF

TFs	percTargets	pValue
NA

GO Terms

Displaying 1 - 1 of 1

GO Terms
NA

Upstream MEME Motif

Motif1 E-Value	Motif1 Consensus	Motif1 Matches	Motif2 E-Value	Motif2 Consensus	Motif2 Matches
0.14	AAAWRWAAARAM	NA	1100	CYCTYTAACTGA	NA

Upstream Weeder Motif

Motif1 Score	Motif1 Consensus	Motif1 Matches	Motif2 Score	Motif2 Consensus	Motif2 Matches
1.35	GGTCGG	NA	1.42	TCGCCGAC	NA

3p UTR Weeder

Motif1 E-Value	Motif1 Consensus	Motif1 Matches	Motif1 Model	Motif2 E-Value	Motif2 Consensus	Motif2 Matches	Motif2 Model
0.63	TATAGG	NA	NA	0.86	ATTGTCNT	NA	NA

3p UTR PITA

miRNAs	percTargets	pValue
NA

3p UTR TargetScan

miRNAs	percTargets	pValue
NA

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