PITA_206 megaCluster: 9 Residual: 0.33

Summary

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
PITA_206 9 0.33 14 0 0.797649 0

Members

Displaying 1 - 70 of 70
13555 E2F transcription factor 1

Details for RP23-109C16.5 - E2F transcription factor 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 13555

Tuberculist Genomic Region

233064 WD repeat domain 62

Details for - - WD repeat domain 62

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 233064

Tuberculist Genomic Region

66270 family with sequence similarity 134, member B

Details for - - family with sequence similarity 134, member B

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66270

Tuberculist Genomic Region

73724 methylmalonyl CoA epimerase

Details for - - methylmalonyl CoA epimerase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 73724

Tuberculist Genomic Region

108037 nurim (nuclear envelope membrane protein)

Details for - - nurim (nuclear envelope membrane protein)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 106582

Tuberculist Genomic Region

14788 serine hydroxymethyltransferase 2 (mitochondrial)

Details for - - serine hydroxymethyltransferase 2 (mitochondrial)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 108037

Tuberculist Genomic Region

15064 G protein-coupled receptor 162

Details for - - G protein-coupled receptor 162

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14788

Tuberculist Genomic Region

15108 major histocompatibility complex, class I-related

Details for - - major histocompatibility complex, class I-related

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15064

Tuberculist Genomic Region

15926 hydroxysteroid (17-beta) dehydrogenase 10

Details for RP23-419G22.2 - hydroxysteroid (17-beta) dehydrogenase 10

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15108

Tuberculist Genomic Region

16848 isocitrate dehydrogenase 1 (NADP+), soluble

Details for - - isocitrate dehydrogenase 1 (NADP+), soluble

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15926

Tuberculist Genomic Region

17095 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase

Details for - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16848

Tuberculist Genomic Region

18670 lymphoblastomic leukemia 1

Details for - - lymphoblastomic leukemia 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17095

Tuberculist Genomic Region

18718 ATP-binding cassette, sub-family B (MDR/TAP), member 4

Details for - - ATP-binding cassette, sub-family B (MDR/TAP), member 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18670

Tuberculist Genomic Region

18755 phosphatidylinositol-5-phosphate 4-kinase, type II, alpha

Details for RP23-396N6.6 - phosphatidylinositol-5-phosphate 4-kinase, type II, alpha

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18718

Tuberculist Genomic Region

210582 protein kinase C, eta

Details for - - protein kinase C, eta

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18755

Tuberculist Genomic Region

217340 coenzyme Q10 homolog A (yeast)

Details for - - coenzyme Q10 homolog A (yeast)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 210582

Tuberculist Genomic Region

217830 ring finger protein 157

Details for RP23-184G6.4 - ring finger protein 157

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 217340

Tuberculist Genomic Region

224454 RIKEN cDNA 9030617O03 gene

Details for - - RIKEN cDNA 9030617O03 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 217830

Tuberculist Genomic Region

224624 zinc finger, DHHC domain containing 14

Details for - - zinc finger, DHHC domain containing 14

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 224454

Tuberculist Genomic Region

234911 Rab40c, member RAS oncogene family

Details for - - Rab40c, member RAS oncogene family

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 224624

Tuberculist Genomic Region

235527 matrix metallopeptidase 27

Details for - - matrix metallopeptidase 27

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 234911

Tuberculist Genomic Region

235627 phospholipid scramblase 4

Details for - - phospholipid scramblase 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 235527

Tuberculist Genomic Region

23825 neurobeachin-like 2

Details for - - neurobeachin-like 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 235627

Tuberculist Genomic Region

24132 barrier to autointegration factor 1

Details for - - barrier to autointegration factor 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 23825

Tuberculist Genomic Region

26879 zinc finger protein 53

Details for - - zinc finger protein 53

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 24132

Tuberculist Genomic Region

270120 UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 1

Details for - - UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 26879

Tuberculist Genomic Region

27029 FAT tumor suppressor homolog 3 (Drosophila)

Details for - - FAT tumor suppressor homolog 3 (Drosophila)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 270120

Tuberculist Genomic Region

27357 N-sulfoglucosamine sulfohydrolase (sulfamidase)

Details for RP23-25M3.2 - N-sulfoglucosamine sulfohydrolase (sulfamidase)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 27029

Tuberculist Genomic Region

28113 glycogenin

Details for - - glycogenin

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 27357

Tuberculist Genomic Region

319660 Terf1 (TRF1)-interacting nuclear factor 2

Details for - - Terf1 (TRF1)-interacting nuclear factor 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 28113

Tuberculist Genomic Region

320438 alkylglycerol monooxygenase

Details for - - alkylglycerol monooxygenase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 319660

Tuberculist Genomic Region

328801 asparagine-linked glycosylation 6 (alpha-1,3,-glucosyltransferase)

Details for RP23-35D18.4 - asparagine-linked glycosylation 6 (alpha-1,3,-glucosyltransferase)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 320438

Tuberculist Genomic Region

381511 zinc finger protein 414

Details for - - zinc finger protein 414

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 328801

Tuberculist Genomic Region

381810 pyruvate dehyrogenase phosphatase catalytic subunit 1

Details for RP23-203A12.1 - pyruvate dehyrogenase phosphatase catalytic subunit 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 381511

Tuberculist Genomic Region

53881 lysophosphatidic acid receptor 5

Details for - - lysophosphatidic acid receptor 5

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 381810

Tuberculist Genomic Region

54122 solute carrier family 5 (inositol transporters), member 3

Details for - - solute carrier family 5 (inositol transporters), member 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 53881

Tuberculist Genomic Region

54197 UEV and lactate/malate dehyrogenase domains

Details for - - UEV and lactate/malate dehyrogenase domains

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 54122

Tuberculist Genomic Region

59031 ring finger protein 5

Details for - - ring finger protein 5

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 54197

Tuberculist Genomic Region

637515 carbohydrate sulfotransferase 12

Details for - - carbohydrate sulfotransferase 12

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 59031

Tuberculist Genomic Region

64540 NLR family, pyrin domain containing 1B

Details for DN-72H10.1 - NLR family, pyrin domain containing 1B

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 637515

Tuberculist Genomic Region

66089 tetraspanin 4

Details for - - tetraspanin 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 64540

Tuberculist Genomic Region

66329 required for meiotic nuclear division 5 homolog B (S. cerevisiae)

Details for RP23-79E13.4 - required for meiotic nuclear division 5 homolog B (S. cerevisiae)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66089

Tuberculist Genomic Region

67760 sushi domain containing 3

Details for - - sushi domain containing 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66329

Tuberculist Genomic Region

68082 solute carrier family 38, member 2

Details for - - solute carrier family 38, member 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67760

Tuberculist Genomic Region

68493 dual specificity phosphatase 19

Details for RP23-393F9.2 - dual specificity phosphatase 19

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68082

Tuberculist Genomic Region

68977 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4

Details for RP23-372J10.1 - NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68493

Tuberculist Genomic Region

69639 hydroxyacylglutathione hydrolase-like

Details for - - hydroxyacylglutathione hydrolase-like

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68977

Tuberculist Genomic Region

69900 exosome component 8

Details for - - exosome component 8

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 69639

Tuberculist Genomic Region

72203 major facilitator superfamily domain containing 11

Details for RP23-468A19.8 - major facilitator superfamily domain containing 11

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 69900

Tuberculist Genomic Region

72720 RIKEN cDNA 2610507I01 gene

Details for - - RIKEN cDNA 2610507I01 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 72203

Tuberculist Genomic Region

74158 zinc finger protein 248

Details for - - zinc finger protein 248

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 72720

Tuberculist Genomic Region

75565 Josephin domain containing 1

Details for - - Josephin domain containing 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 74158

Tuberculist Genomic Region

76263 coiled-coil domain containing 101

Details for - - coiled-coil domain containing 101

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 75565

Tuberculist Genomic Region

80290 glutathione S-transferase kappa 1

Details for - - glutathione S-transferase kappa 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 76263

Tuberculist Genomic Region

18569 G protein-coupled receptor 146

Details for - - G protein-coupled receptor 146

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 80290

Tuberculist Genomic Region

20111 programmed cell death 4

Details for - - programmed cell death 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18569

Tuberculist Genomic Region

210710 ribosomal protein S6 kinase polypeptide 1

Details for RP23-256C7.2 - ribosomal protein S6 kinase polypeptide 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20111

Tuberculist Genomic Region

223753 growth factor receptor bound protein 2-associated protein 3

Details for RP23-184H6.3 - growth factor receptor bound protein 2-associated protein 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 210710

Tuberculist Genomic Region

228875 ceramide kinase

Details for - - ceramide kinase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 223753

Tuberculist Genomic Region

228880 solute carrier family 35, member C2

Details for RP23-41B20.3 - solute carrier family 35, member C2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 228875

Tuberculist Genomic Region

246229 zinc finger, MYND-type containing 8

Details for RP23-108D12.1 - zinc finger, MYND-type containing 8

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 228880

Tuberculist Genomic Region

66847 basic, immunoglobulin-like variable motif containing

Details for - - basic, immunoglobulin-like variable motif containing

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 246229

Tuberculist Genomic Region

66950 histidine triad nucleotide binding protein 3

Details for - - histidine triad nucleotide binding protein 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66847

Tuberculist Genomic Region

72674 transmembrane protein 206

Details for - - transmembrane protein 206

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66950

Tuberculist Genomic Region

72852 adiponectin receptor 1

Details for - - adiponectin receptor 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 72674

Tuberculist Genomic Region

14886 metallo-beta-lactamase domain containing 2

Details for - - metallo-beta-lactamase domain containing 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 72852

Tuberculist Genomic Region

20913 general transcription factor II I

Details for - - general transcription factor II I

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14886

Tuberculist Genomic Region

68281 syntaxin binding protein 4

Details for RP23-101M12.1 - syntaxin binding protein 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20913

Tuberculist Genomic Region

74048 RIKEN cDNA 4930430F08 gene

Details for - - RIKEN cDNA 4930430F08 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68281

Tuberculist Genomic Region

Details for - - RIKEN cDNA 4632428N05 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 74048

Tuberculist Genomic Region

TFBS DB TF

TFs percTargets pValue
V_GLI3_01_M01596 0.507246 0.000000504

GO Terms

Displaying 1 - 1 of 1
GO Terms
NA

Upstream MEME Motif

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif2 E-Value Motif2 Consensus Motif2 Matches
0.000039 AAASAAACAAAC Foxd3_MA0041.1, FOXI1_MA0042.1, V$FOX_Q2_M00809, V$FOXD3_01_M00130, V$HNF3G_Q4_M02015, V$HFH3_01_M00289, FOXC1_forkhead_DBD_dimeric_13_1 0.000045 CCCCSCCCCCCC SP1_MA0079.2, Klf4_MA0039.2, SP1_MA0079.1, Egr1_MA0162.1, V$SP4_Q5_M01273, V$SP1_Q2_01_M00933, V$ZFP281_01_M01597, V$SP1_03_M02281, V$SP1_Q6_M00196, V$ZNF219_01_M01122, V$ZFP281_04_M02831, V$SP1_Q6_01_M00931, V$SP1_Q4_01_M00932, V$UF1H3BETA_Q6_M01068, V$ZBP89_Q4_M01816, V$SP1_02_M01303, V$EGR1_Q6_M01873, V$CKROX_Q2_M01175, V$EGR1_06_M02744, V$GKLF_02_M01588, V$KLF7_03_M02773, V$KROX_Q6_M00982, V$WT1_Q6_01_M02036, V$GC_01_M00255, V$SP1SP3_Q4_M01219, V$SP4_03_M02810, V$MAZ_Q6_M00649, V$MAZR_01_M00491, V$CACD_01_M01113, V$ZFP740_03_M02834, V$MAZ_Q6_01_M02023, V$SP1_01_M00008, V$FKLF_Q5_M01837, V$KLF15_Q2_M01714, V$SP2_01_M01783, V$CACBINDINGPROTEIN_Q6_M00720, V$SMAD4_04_M02898, V$MOVOB_01_M01104, V$NGFIC_01_M00244, V$EGR1_02_M01972, V$E2F3_Q6_M02089, V$EGR_Q6_M00807, V$BCL6B_04_M02844, V$EKLF_Q5_M01874, V$RREB1_01_M00257, V$GLI3_Q5_01_M01657, V$WT1_Q6_M01118, V$ETF_Q6_M00695, V$EGR2_Q6_M02092, V$EGR1_01_M00243, V$ZNF515_01_M01231, V$CACCCBINDINGFACTOR_Q6_M00721, V$BTEB3_Q5_M01865, V$ZFP410_04_M02936, V$EGR2_01_M00246, Zfp281.2, Egr1.1, Klf7.1, Sp4.1, Zfp740.1, Zif268.1, Smad3.1, Bcl6b.2, Zfp410.1, Ascl2.2, Egr1.2, Sox13.2, ZNF740_C2H2_full_monomeric_10_1, KLF16_C2H2_DBD_monomeric_11_1, SP4_C2H2_full_monomeric_17_1, SP1_C2H2_DBD_monomeric_11_1, SP8_C2H2_DBD_monomeric_12_1, Egr1_C2H2_mouse-DBD_mutant_DBD_monomeric_16_1, SP3_C2H2_DBD_monomeric_11_1, KLF14_C2H2_DBD_monomeric_14_1, Zfp740_C2H2_DBD_monomeric_10_1, EGR2_C2H2_full_monomeric_15_1, Klf12_C2H2_DBD_monomeric_15_1, EGR4_C2H2_DBD_monomeric_16_2, Egr3_C2H2_DBD_monomeric_15_1, EGR2_C2H2_DBD_monomeric_11_1, EGR1_C2H2_full_monomeric_14_1

Upstream Weeder Motif

Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
1.18 CGCGAC Zfp161.2, Max.2 1.09 GTCGCGGT NA

3p UTR Weeder

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
0.43 CGGGCG NA NA 0.44 NGGGAANG NA NA

3p UTR PITA

miRNAs percTargets pValue
NA

3p UTR TargetScan

miRNAs percTargets pValue
NA

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