PITA_213 megaCluster: 11 Residual: 0.15 | Macrophage Network Portal

Summary

Title	Cluster	Residual	Bicluster Conditions	Residual Permutation P-Value	Var. Exp. First PC	Var. Exp. First PC Perm. P-Value
PITA_213	11	0.15	15	0	0.963737	0

Members

Displaying 1 - 25 of 25

11739 solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 4 Details for - - solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 4 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 11739 Tuberculist Genomic Region	12237 budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae) Details for - - budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 12237 Tuberculist Genomic Region
13722 aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 Details for - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 13722 Tuberculist Genomic Region	15893 islet cell autoantigen 1 Details for - - islet cell autoantigen 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 15893 Tuberculist Genomic Region
17149 mago-nashi homolog, proliferation-associated (Drosophila) Details for RP23-40G2.2 - mago-nashi homolog, proliferation-associated (Drosophila) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 17149 Tuberculist Genomic Region	17846 COMM domain containing 1 Details for RP23-242C19.3 - COMM domain containing 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 17846 Tuberculist Genomic Region
18634 peroxisomal biogenesis factor 7 Details for - - peroxisomal biogenesis factor 7 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 18634 Tuberculist Genomic Region	20196 S100 calcium binding protein A13 Details for - - S100 calcium binding protein A13 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 20196 Tuberculist Genomic Region
26411 mitogen-activated protein kinase kinase kinase kinase 1 Details for - - mitogen-activated protein kinase kinase kinase kinase 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 26411 Tuberculist Genomic Region	27398 mitochondrial ribosomal protein L2 Details for RP23-76I16.2 - mitochondrial ribosomal protein L2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 27398 Tuberculist Genomic Region
30932 zinc finger protein 330 Details for - - zinc finger protein 330 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 30932 Tuberculist Genomic Region	448850 zinc finger, HIT type 3 Details for RP23-391K14.3 - zinc finger, HIT type 3 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 448850 Tuberculist Genomic Region
52683 non-SMC condensin II complex, subunit H2 Details for - - non-SMC condensin II complex, subunit H2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 52683 Tuberculist Genomic Region	56451 succinate-CoA ligase, GDP-forming, alpha subunit Details for - - succinate-CoA ligase, GDP-forming, alpha subunit GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 56451 Tuberculist Genomic Region
56529 SEC11 homolog A (S. cerevisiae) Details for - - SEC11 homolog A (S. cerevisiae) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 56529 Tuberculist Genomic Region	66191 immediate early response 3 interacting protein 1 Details for - - immediate early response 3 interacting protein 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 66191 Tuberculist Genomic Region
66411 tubulin folding cofactor B Details for - - tubulin folding cofactor B GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 66411 Tuberculist Genomic Region	664994 isochorismatase domain containing 2a Details for - - isochorismatase domain containing 2a GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 664994 Tuberculist Genomic Region
67881 magnesium-dependent phosphatase 1 Details for - - magnesium-dependent phosphatase 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 67881 Tuberculist Genomic Region	68080 GPN-loop GTPase 3 Details for - - GPN-loop GTPase 3 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 68080 Tuberculist Genomic Region
71881 adipocyte plasma membrane associated protein Details for RP23-156P22.2 - adipocyte plasma membrane associated protein GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 71881 Tuberculist Genomic Region	72042 coactosin-like 1 (Dictyostelium) Details for - - coactosin-like 1 (Dictyostelium) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 72042 Tuberculist Genomic Region
72569 Bardet-Biedl syndrome 5 (human) Details for RP23-436E15.1 - Bardet-Biedl syndrome 5 (human) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 72569 Tuberculist Genomic Region	80280 CDK5 regulatory subunit associated protein 3 Details for RP23-353J21.7 - CDK5 regulatory subunit associated protein 3 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 80280 Tuberculist Genomic Region
68202 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5 Details for - - NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 68202 Tuberculist Genomic Region

TFBS DB TF

TFs	percTargets	pValue
V_AMEF2_Q6_M00403	0.2	0.0000415

GO Terms

Displaying 1 - 1 of 1

GO Terms
NA

Upstream MEME Motif

Motif1 E-Value	Motif1 Consensus	Motif1 Matches	Motif2 E-Value	Motif2 Consensus	Motif2 Matches
0.028	WGTNTTTYTTTT	NA	2800	AATTWATMAAA	NA

Upstream Weeder Motif

Motif1 Score	Motif1 Consensus	Motif1 Matches	Motif2 Score	Motif2 Consensus	Motif2 Matches
1.18	CGGAAC	NA	1.43	CGTGAACG	NA

3p UTR Weeder

Motif1 E-Value	Motif1 Consensus	Motif1 Matches	Motif1 Model	Motif2 E-Value	Motif2 Consensus	Motif2 Matches	Motif2 Model
0.7	ACGCCG	NA	NA	0.93	TCGGCGGA	NA	NA

3p UTR PITA

miRNAs	percTargets	pValue
NA

3p UTR TargetScan

miRNAs	percTargets	pValue
NA

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