PITA_22 megaCluster: 10 Residual: 0.47

Summary

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
PITA_22 10 0.47 6 0.003 0.494343 1

Members

Displaying 1 - 69 of 69
100126824 SCO cytochrome oxidase deficient homolog 2 (yeast)

Details for - - SCO cytochrome oxidase deficient homolog 2 (yeast)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100126824

Tuberculist Genomic Region

108961 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2

Details for - - regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 105670

Tuberculist Genomic Region

12409 WW domain containing E3 ubiquitin protein ligase 1

Details for - - WW domain containing E3 ubiquitin protein ligase 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 107568

Tuberculist Genomic Region

12487 E2F transcription factor 8

Details for - - E2F transcription factor 8

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 108961

Tuberculist Genomic Region

13723 carbonyl reductase 2

Details for RP23-84C12.20-001 - carbonyl reductase 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12409

Tuberculist Genomic Region

13849 CD28 antigen

Details for CH29-189K17.3 - CD28 antigen

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12487

Tuberculist Genomic Region

14866 embigin

Details for - - embigin

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 13723

Tuberculist Genomic Region

15926 epoxide hydrolase 1, microsomal

Details for - - epoxide hydrolase 1, microsomal

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 13849

Tuberculist Genomic Region

17064 glutathione S-transferase, mu 5

Details for - - glutathione S-transferase, mu 5

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14866

Tuberculist Genomic Region

17155 isocitrate dehydrogenase 1 (NADP+), soluble

Details for - - isocitrate dehydrogenase 1 (NADP+), soluble

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15926

Tuberculist Genomic Region

17533 CD93 antigen

Details for RP23-70N3.4 - CD93 antigen

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17064

Tuberculist Genomic Region

18516 mannosidase 1, alpha

Details for - - mannosidase 1, alpha

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17155

Tuberculist Genomic Region

18669 mannose receptor, C type 1

Details for - - mannose receptor, C type 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17533

Tuberculist Genomic Region

18670 pre B cell leukemia homeobox 3

Details for RP23-438I5.1 - pre B cell leukemia homeobox 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18516

Tuberculist Genomic Region

19296 ATP-binding cassette, sub-family B (MDR/TAP), member 1B

Details for - - ATP-binding cassette, sub-family B (MDR/TAP), member 1B

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18669

Tuberculist Genomic Region

20194 ATP-binding cassette, sub-family B (MDR/TAP), member 4

Details for - - ATP-binding cassette, sub-family B (MDR/TAP), member 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18670

Tuberculist Genomic Region

20775 plasmacytoma variant translocation 1

Details for - - plasmacytoma variant translocation 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 19296

Tuberculist Genomic Region

20849 S100 calcium binding protein A10 (calpactin)

Details for - - S100 calcium binding protein A10 (calpactin)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20194

Tuberculist Genomic Region

217262 squalene epoxidase

Details for - - squalene epoxidase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20775

Tuberculist Genomic Region

217303 signal transducer and activator of transcription 4

Details for - - signal transducer and activator of transcription 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20849

Tuberculist Genomic Region

224088 ATP-binding cassette, sub-family A (ABC1), member 9

Details for RP23-328B4.1 - ATP-binding cassette, sub-family A (ABC1), member 9

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 217262

Tuberculist Genomic Region

224132 CD300A antigen

Details for RP23-254J18.3 - CD300A antigen

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 217303

Tuberculist Genomic Region

227612 ATPase type 13A3

Details for - - ATPase type 13A3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 224088

Tuberculist Genomic Region

231532 disrupted in renal carcinoma 2 (human)

Details for - - disrupted in renal carcinoma 2 (human)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 224132

Tuberculist Genomic Region

232288 torsin family 4, member A

Details for RP23-132N23.3 - torsin family 4, member A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 227612

Tuberculist Genomic Region

233552 Rho GTPase activating protein 24

Details for - - Rho GTPase activating protein 24

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 231532

Tuberculist Genomic Region

234353 FERM domain containing 4B

Details for - - FERM domain containing 4B

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 232288

Tuberculist Genomic Region

234515 glycerophosphodiester phosphodiesterase domain containing 5

Details for - - glycerophosphodiester phosphodiesterase domain containing 5

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 233552

Tuberculist Genomic Region

234911 pleckstrin and Sec7 domain containing 3

Details for - - pleckstrin and Sec7 domain containing 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 234353

Tuberculist Genomic Region

237860 inositol polyphosphate-4-phosphatase, type II

Details for - - inositol polyphosphate-4-phosphatase, type II

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 234515

Tuberculist Genomic Region

238722 matrix metallopeptidase 27

Details for - - matrix metallopeptidase 27

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 234911

Tuberculist Genomic Region

23886 slingshot homolog 2 (Drosophila)

Details for RP23-285D3.1 - slingshot homolog 2 (Drosophila)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 237860

Tuberculist Genomic Region

239667 zinc finger protein 72

Details for - - zinc finger protein 72

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 238722

Tuberculist Genomic Region

26442 growth differentiation factor 15

Details for - - growth differentiation factor 15

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 23886

Tuberculist Genomic Region

270120 DIP2 disco-interacting protein 2 homolog B (Drosophila)

Details for - - DIP2 disco-interacting protein 2 homolog B (Drosophila)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 239667

Tuberculist Genomic Region

319625 proteasome (prosome, macropain) subunit, alpha type 5

Details for RP23-27B23.2 - proteasome (prosome, macropain) subunit, alpha type 5

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 26442

Tuberculist Genomic Region

320165 FAT tumor suppressor homolog 3 (Drosophila)

Details for - - FAT tumor suppressor homolog 3 (Drosophila)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 270120

Tuberculist Genomic Region

382423 galactose mutarotase

Details for - - galactose mutarotase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 319625

Tuberculist Genomic Region

53881 transforming, acidic coiled-coil containing protein 1

Details for - - transforming, acidic coiled-coil containing protein 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 320165

Tuberculist Genomic Region

54712 ataxin 7-like 3B

Details for - - ataxin 7-like 3B

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 382423

Tuberculist Genomic Region

57257 solute carrier family 5 (inositol transporters), member 3

Details for - - solute carrier family 5 (inositol transporters), member 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 53881

Tuberculist Genomic Region

58809 plexin C1

Details for - - plexin C1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 54712

Tuberculist Genomic Region

64540 vav 3 oncogene

Details for DN-315E9.1 - vav 3 oncogene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 57257

Tuberculist Genomic Region

66329 ribonuclease, RNase A family 4

Details for - - ribonuclease, RNase A family 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 58809

Tuberculist Genomic Region

66775 tetraspanin 4

Details for - - tetraspanin 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 64540

Tuberculist Genomic Region

66972 sushi domain containing 3

Details for - - sushi domain containing 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66329

Tuberculist Genomic Region

67468 protein tyrosine phosphatase-like A domain containing 2

Details for - - protein tyrosine phosphatase-like A domain containing 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66775

Tuberculist Genomic Region

67760 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23

Details for - - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66972

Tuberculist Genomic Region

67902 monocyte to macrophage differentiation-associated

Details for RP23-220F20.1 - monocyte to macrophage differentiation-associated

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67468

Tuberculist Genomic Region

69171 solute carrier family 38, member 2

Details for - - solute carrier family 38, member 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67760

Tuberculist Genomic Region

70561 sulfatase modifying factor 2

Details for - - sulfatase modifying factor 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67902

Tuberculist Genomic Region

71207 cyclin Pas1/PHO80 domain containing 1

Details for - - cyclin Pas1/PHO80 domain containing 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 69171

Tuberculist Genomic Region

71846 thioredoxin domain containing 16

Details for - - thioredoxin domain containing 16

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 70561

Tuberculist Genomic Region

71966 nudix (nucleoside diphosphate linked moiety X)-type motif 4

Details for - - nudix (nucleoside diphosphate linked moiety X)-type motif 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 71207

Tuberculist Genomic Region

73710 synaptonemal complex central element protein 2

Details for - - synaptonemal complex central element protein 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 71846

Tuberculist Genomic Region

74091 NFKB inhibitor interacting Ras-like protein 2

Details for RP23-390D17.2 - NFKB inhibitor interacting Ras-like protein 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 71966

Tuberculist Genomic Region

75007 tubulin, beta 2B class IIB

Details for - - tubulin, beta 2B class IIB

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 73710

Tuberculist Genomic Region

75565 N-acetylneuraminate pyruvate lyase

Details for - - N-acetylneuraminate pyruvate lyase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 74091

Tuberculist Genomic Region

77604 family with sequence similarity 63, member A

Details for - - family with sequence similarity 63, member A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 75007

Tuberculist Genomic Region

78808 coiled-coil domain containing 101

Details for - - coiled-coil domain containing 101

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 75565

Tuberculist Genomic Region

14595 RNA binding motif protein 12 B2

Details for RP23-203A12.6 - RNA binding motif protein 12 B2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 77604

Tuberculist Genomic Region

213002 syntaxin binding protein 5 (tomosyn)

Details for - - syntaxin binding protein 5 (tomosyn)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 78808

Tuberculist Genomic Region

319554 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1

Details for RP23-135L5.6 - UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14595

Tuberculist Genomic Region

627984 interferon induced transmembrane protein 6

Details for - - interferon induced transmembrane protein 6

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 213002

Tuberculist Genomic Region

72278 isopentenyl-diphosphate delta isomerase

Details for - - isopentenyl-diphosphate delta isomerase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 319554

Tuberculist Genomic Region

74048 NLR family, pyrin domain containing 1C, pseudogene

Details for DN-246G6.3 - NLR family, pyrin domain containing 1C, pseudogene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 627984

Tuberculist Genomic Region

97998 cell cycle progression 1

Details for - - cell cycle progression 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 72278

Tuberculist Genomic Region

Details for - - RIKEN cDNA 4632428N05 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 74048

Tuberculist Genomic Region

Details for - - DEP domain containing MTOR-interacting protein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 97998

Tuberculist Genomic Region

TFBS DB TF

TFs percTargets pValue
V_MAFB_05_M02775 0.164179 0.0000116

GO Terms

Displaying 1 - 1 of 1
GO Terms
NA

Upstream MEME Motif

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif2 E-Value Motif2 Consensus Motif2 Matches
0.000000052 MAAWGAAAACAR FOXA1_MA0148.1, FOXF2_MA0030.1 0.33 CAACTTTYWAAA NA

Upstream Weeder Motif

Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
0.83 TACGCG NA 0.91 CANCGCGG

3p UTR Weeder

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
0.34 ACTACG NA NA 0.42 TGANGAAC NA NA

3p UTR PITA

miRNAs percTargets pValue
mmu-miR-509-3p 0.474576 0.00000221

3p UTR TargetScan

miRNAs percTargets pValue
mmu-miR-3472 0.245902 0.0000264

Add comment

Log in or register to post comments