PITA_65 megaCluster: 6 Residual: 0.20

Summary

Title	Cluster	Residual	Bicluster Conditions	Residual Permutation P-Value	Var. Exp. First PC	Var. Exp. First PC Perm. P-Value
PITA_65	6	0.20	15	0	0.933139	0

Members

Displaying 1 - 39 of 39

TFBS DB TF

TFs	percTargets	pValue
NA

GO Terms

Displaying 1 - 1 of 1

GO Terms
NA

Upstream MEME Motif

Motif1 E-Value	Motif1 Consensus	Motif1 Matches	Motif2 E-Value	Motif2 Consensus	Motif2 Matches
0.00000000000062	AAAANAAAGNAA	NA	0.0092	AAGAKAAANRTG	NA

Upstream Weeder Motif

Motif1 Score	Motif1 Consensus	Motif1 Matches	Motif2 Score	Motif2 Consensus	Motif2 Matches
1.18	TCCGCG	NA	1.26	TCCGCGTC	NA

3p UTR Weeder

Motif1 E-Value	Motif1 Consensus	Motif1 Matches	Motif1 Model	Motif2 E-Value	Motif2 Consensus	Motif2 Matches	Motif2 Model
0.56	GGGTTT	NA	NA	0.6	GACCGTAC	NA	NA

3p UTR PITA

miRNAs	percTargets	pValue
NA

3p UTR TargetScan

miRNAs	percTargets	pValue
NA

100043636 expressed sequence AI662270 Details for - - expressed sequence AI662270 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 100043636 Tuberculist Genomic Region	11363 bleomycin hydrolase Details for RP23-100P23.3 - bleomycin hydrolase GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 104184 Tuberculist Genomic Region
117197 acyl-Coenzyme A dehydrogenase, long-chain Details for AC124389.2 - acyl-Coenzyme A dehydrogenase, long-chain GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 11363 Tuberculist Genomic Region	12452 biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino Details for - - biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 117197 Tuberculist Genomic Region
18472 cyclin G2 Details for - - cyclin G2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 12452 Tuberculist Genomic Region	18518 platelet-activating factor acetylhydrolase, isoform 1b, subunit 1 Details for RP23-194P5.2 - platelet-activating factor acetylhydrolase, isoform 1b, subunit 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 18472 Tuberculist Genomic Region
19038 immunoglobulin (CD79A) binding protein 1 Details for - - immunoglobulin (CD79A) binding protein 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 18518 Tuberculist Genomic Region	216618 peptidylprolyl isomerase C Details for - - peptidylprolyl isomerase C GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 19038 Tuberculist Genomic Region
23971 coiled-coil domain containing 104 Details for RP23-393O10.2 - coiled-coil domain containing 104 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 216618 Tuberculist Genomic Region	54208 3'-phosphoadenosine 5'-phosphosulfate synthase 1 Details for - - 3'-phosphoadenosine 5'-phosphosulfate synthase 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 23971 Tuberculist Genomic Region
54405 ADP-ribosylation factor-like 6 interacting protein 1 Details for - - ADP-ribosylation factor-like 6 interacting protein 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 54208 Tuberculist Genomic Region	56338 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1 Details for RP23-43O20.5 - NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 54405 Tuberculist Genomic Region
66537 thioredoxin interacting protein Details for - - thioredoxin interacting protein GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 56338 Tuberculist Genomic Region	667803 proteasome maturation protein Details for - - proteasome maturation protein GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 66537 Tuberculist Genomic Region
67103 RIKEN cDNA C920025E04 gene Details for - - RIKEN cDNA C920025E04 gene GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 667803 Tuberculist Genomic Region	67441 prostaglandin reductase 1 Details for RP23-211P15.3 - prostaglandin reductase 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 67103 Tuberculist Genomic Region
68099 isochorismatase domain containing 2b Details for - - isochorismatase domain containing 2b GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 67441 Tuberculist Genomic Region	68328 family with sequence similarity 92, member A Details for RP24-215D6.5 - family with sequence similarity 92, member A GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 68099 Tuberculist Genomic Region
68735 RAB13, member RAS oncogene family Details for - - RAB13, member RAS oncogene family GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 68328 Tuberculist Genomic Region	68776 mitochondrial ribosomal protein S18C Details for - - mitochondrial ribosomal protein S18C GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 68735 Tuberculist Genomic Region
68879 TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor Details for RP24-258K7.3 - TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 68776 Tuberculist Genomic Region	72657 PRP6 pre-mRNA splicing factor 6 homolog (yeast) Details for RP23-138J20.4 - PRP6 pre-mRNA splicing factor 6 homolog (yeast) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 68879 Tuberculist Genomic Region
74359 RIKEN cDNA 2700094K13 gene Details for - - RIKEN cDNA 2700094K13 gene GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 72657 Tuberculist Genomic Region	74375 RIKEN cDNA 4931414P19 gene Details for - - RIKEN cDNA 4931414P19 gene GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 74359 Tuberculist Genomic Region
80286 golgi coiled coil 1 Details for - - golgi coiled coil 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 74375 Tuberculist Genomic Region	85308 tumor suppressor candidate 3 Details for - - tumor suppressor candidate 3 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 80286 Tuberculist Genomic Region
99730 ER membrane protein complex subunit 9 Details for - - ER membrane protein complex subunit 9 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 85308 Tuberculist Genomic Region	12578 TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor Details for RP23-128G10.3 - TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 99730 Tuberculist Genomic Region
12747 cyclin-dependent kinase inhibitor 2A Details for RP23-166I8.5 - cyclin-dependent kinase inhibitor 2A GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 12578 Tuberculist Genomic Region	50797 CDC-like kinase 1 Details for - - CDC-like kinase 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 12747 Tuberculist Genomic Region
50875 coatomer protein complex, subunit beta 2 (beta prime) Details for - - coatomer protein complex, subunit beta 2 (beta prime) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 50797 Tuberculist Genomic Region	52120 tropomodulin 3 Details for - - tropomodulin 3 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 50875 Tuberculist Genomic Region
56354 heparan-alpha-glucosaminide N-acetyltransferase Details for - - heparan-alpha-glucosaminide N-acetyltransferase GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 52120 Tuberculist Genomic Region	83410 DnaJ (Hsp40) homolog, subfamily C, member 7 Details for RP23-390D17.1 - DnaJ (Hsp40) homolog, subfamily C, member 7 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 56354 Tuberculist Genomic Region
26399 cleavage stimulation factor, 3' pre-RNA subunit 2, tau Details for - - cleavage stimulation factor, 3' pre-RNA subunit 2, tau GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 83410 Tuberculist Genomic Region	317717 mitogen-activated protein kinase kinase 6 Details for RP23-162E10.1 - mitogen-activated protein kinase kinase 6 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 26399 Tuberculist Genomic Region
70536 SEC22 vesicle trafficking protein homolog A (S. cerevisiae) Details for - - SEC22 vesicle trafficking protein homolog A (S. cerevisiae) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 317717 Tuberculist Genomic Region	76936 glutaminyl-peptide cyclotransferase (glutaminyl cyclase) Details for - - glutaminyl-peptide cyclotransferase (glutaminyl cyclase) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 70536 Tuberculist Genomic Region
Details for RP24-225N8.1 - heterogeneous nuclear ribonucleoprotein M GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 76936 Tuberculist Genomic Region

Summary

Members

Details for - - expressed sequence AI662270

Details for RP23-100P23.3 - bleomycin hydrolase

Details for AC124389.2 - acyl-Coenzyme A dehydrogenase, long-chain

Details for - - biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino

Details for - - cyclin G2

Details for RP23-194P5.2 - platelet-activating factor acetylhydrolase, isoform 1b, subunit 1

Details for - - immunoglobulin (CD79A) binding protein 1

Details for - - peptidylprolyl isomerase C

Details for RP23-393O10.2 - coiled-coil domain containing 104

Details for - - 3'-phosphoadenosine 5'-phosphosulfate synthase 1

Details for - - ADP-ribosylation factor-like 6 interacting protein 1

Details for RP23-43O20.5 - NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1

Details for - - thioredoxin interacting protein

Details for - - proteasome maturation protein

Details for - - RIKEN cDNA C920025E04 gene

Details for RP23-211P15.3 - prostaglandin reductase 1

Details for - - isochorismatase domain containing 2b

Details for RP24-215D6.5 - family with sequence similarity 92, member A

Details for - - RAB13, member RAS oncogene family

Details for - - mitochondrial ribosomal protein S18C

Details for RP24-258K7.3 - TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor

Details for RP23-138J20.4 - PRP6 pre-mRNA splicing factor 6 homolog (yeast)

Details for - - RIKEN cDNA 2700094K13 gene

Details for - - RIKEN cDNA 4931414P19 gene

Details for - - golgi coiled coil 1

Details for - - tumor suppressor candidate 3

Details for - - ER membrane protein complex subunit 9

Details for RP23-128G10.3 - TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor

Details for RP23-166I8.5 - cyclin-dependent kinase inhibitor 2A

Details for - - CDC-like kinase 1

Details for - - coatomer protein complex, subunit beta 2 (beta prime)

Details for - - tropomodulin 3

Details for - - heparan-alpha-glucosaminide N-acetyltransferase

Details for RP23-390D17.1 - DnaJ (Hsp40) homolog, subfamily C, member 7

Details for - - cleavage stimulation factor, 3' pre-RNA subunit 2, tau

Details for RP23-162E10.1 - mitogen-activated protein kinase kinase 6

Details for - - SEC22 vesicle trafficking protein homolog A (S. cerevisiae)

Details for - - glutaminyl-peptide cyclotransferase (glutaminyl cyclase)

Details for RP24-225N8.1 - heterogeneous nuclear ribonucleoprotein M

GO Terms

3p UTR PITA