PITA_85 megaCluster: 1 Residual: 0.28

Summary

Title	Cluster	Residual	Bicluster Conditions	Residual Permutation P-Value	Var. Exp. First PC	Var. Exp. First PC Perm. P-Value
PITA_85	1	0.28	15	0	0.859191	0

Members

Displaying 1 - 70 of 70

TFBS DB TF

TFs	percTargets	pValue
Zfp161.2	0.649123	0.0000000394

GO Terms

Displaying 1 - 1 of 1

GO Terms
NA

Upstream MEME Motif

Motif1 E-Value	Motif1 Consensus	Motif1 Matches	Motif2 E-Value	Motif2 Consensus	Motif2 Matches
1.6e-17	AAAAAAAAAAAA	NA	72000	GGCCCCGCCCC	Klf4_MA0039.2, SP1_MA0079.2, V$SP4_Q5_M01273, V$SP1_Q6_01_M00931, V$SP1_02_M01303, V$SP1_Q6_M00196, V$SP1_Q4_01_M00932, V$KLF7_03_M02773, V$UF1H3BETA_Q6_M01068, V$SP2_01_M01783, V$SP1_Q2_01_M00933, V$ZFP281_01_M01597, V$MAZR_01_M00491, V$GC_01_M00255, V$SP4_03_M02810, V$GKLF_02_M01588, V$CKROX_Q2_M01175, V$SP1_03_M02281, V$E2F3_Q6_M02089, V$MAZ_Q6_M00649, V$SP1_01_M00008, V$ZFP281_04_M02831, V$CACD_01_M01113, V$ETF_Q6_M00695, V$KROX_Q6_M00982, V$BCL6B_04_M02844, V$ZBP89_Q4_M01816, V$EGR1_06_M02744, V$SMAD4_04_M02898, V$EGR1_Q6_M01873, V$ZNF219_01_M01122, V$E2F_Q2_M00803, V$CNOT3_01_M01253, V$EKLF_Q5_M01874, Klf7.1, Sp4.1, Zfp281.2, Egr1.1, Bcl6b.2, Smad3.1, Sp4.2, Zfp410.1, Zfp740.1, SP4_C2H2_full_monomeric_17_1, KLF14_C2H2_DBD_monomeric_14_1, KLF13_C2H2_full_monomeric_18_1, KLF16_C2H2_DBD_monomeric_11_1, Klf12_C2H2_DBD_monomeric_15_1, SP1_C2H2_DBD_monomeric_11_1, SP3_C2H2_DBD_monomeric_11_1, SP8_C2H2_DBD_monomeric_12_1

Upstream Weeder Motif

Motif1 Score	Motif1 Consensus	Motif1 Matches	Motif2 Score	Motif2 Consensus	Motif2 Matches
1.16	GNCGCG	Zfp161.2, Max.2	1.27	GCGGCCGC	NA

3p UTR Weeder

Motif1 E-Value	Motif1 Consensus	Motif1 Matches	Motif1 Model	Motif2 E-Value	Motif2 Consensus	Motif2 Matches	Motif2 Model
0.35	GTCNCT	NA	NA	0.37	TCCCNACC	NA	NA

3p UTR PITA

miRNAs	percTargets	pValue
mmu-miR-491	0.755102	0.0000121

3p UTR TargetScan

miRNAs	percTargets	pValue
mmu-miR-3091-5p	0.269231	0.0000221

100503374 predicted gene, 17435 Details for - - predicted gene, 17435 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 100503374 Tuberculist Genomic Region	105522 predicted gene, 20114 Details for - - predicted gene, 20114 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 100504211 Tuberculist Genomic Region
12176 ankyrin repeat domain 28 Details for - - ankyrin repeat domain 28 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 105522 Tuberculist Genomic Region	14062 BCL2/adenovirus E1B interacting protein 3 Details for - - BCL2/adenovirus E1B interacting protein 3 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 12176 Tuberculist Genomic Region
15200 coagulation factor II (thrombin) receptor Details for - - coagulation factor II (thrombin) receptor GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 14062 Tuberculist Genomic Region	15273 heparin-binding EGF-like growth factor Details for - - heparin-binding EGF-like growth factor GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 15200 Tuberculist Genomic Region
15368 human immunodeficiency virus type I enhancer binding protein 2 Details for - - human immunodeficiency virus type I enhancer binding protein 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 15273 Tuberculist Genomic Region	16071 heme oxygenase (decycling) 1 Details for - - heme oxygenase (decycling) 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 15368 Tuberculist Genomic Region
16154 immunoglobulin kappa constant Details for - - immunoglobulin kappa constant GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 16071 Tuberculist Genomic Region	16177 interleukin 10 receptor, alpha Details for - - interleukin 10 receptor, alpha GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 16154 Tuberculist Genomic Region
171249 interleukin 1 receptor, type I Details for - - interleukin 1 receptor, type I GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 16177 Tuberculist Genomic Region	17750 vomeronasal 1 receptor 213 Details for RP23-277B9.6 - vomeronasal 1 receptor 213 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 171249 Tuberculist Genomic Region
18413 metallothionein 2 Details for - - metallothionein 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 17750 Tuberculist Genomic Region	195209 oncostatin M Details for RP23-453B22.1 - oncostatin M GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 18413 Tuberculist Genomic Region
213053 predicted gene 22 Details for - - predicted gene 22 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 195209 Tuberculist Genomic Region	233489 solute carrier family 39 (zinc transporter), member 14 Details for - - solute carrier family 39 (zinc transporter), member 14 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 213053 Tuberculist Genomic Region
242509 phosphatidylinositol binding clathrin assembly protein Details for - - phosphatidylinositol binding clathrin assembly protein GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 233489 Tuberculist Genomic Region	327900 basonuclin 2 Details for RP23-229A22.1 - basonuclin 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 242509 Tuberculist Genomic Region
330096 ubiquitin domain containing 2 Details for RP23-395O6.1 - ubiquitin domain containing 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 327900 Tuberculist Genomic Region	333639 shisa homolog 3 (Xenopus laevis) Details for - - shisa homolog 3 (Xenopus laevis) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 330096 Tuberculist Genomic Region
50527 mastermind-like domain containing 1 Details for - - mastermind-like domain containing 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 333639 Tuberculist Genomic Region	55948 ERO1-like (S. cerevisiae) Details for - - ERO1-like (S. cerevisiae) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 50527 Tuberculist Genomic Region
56193 stratifin Details for RP23-137L22.11-001 - stratifin GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 55948 Tuberculist Genomic Region	56336 pleckstrin Details for RP23-348N2.1 - pleckstrin GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 56193 Tuberculist Genomic Region
626534 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5 Details for RP23-105M23.2 - UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 56336 Tuberculist Genomic Region	627939 tubulin, alpha 1C pseudogene Details for - - tubulin, alpha 1C pseudogene GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 626534 Tuberculist Genomic Region
68949 ribosomal protein L21 pseudogene Details for - - ribosomal protein L21 pseudogene GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 627939 Tuberculist Genomic Region	723909 RIKEN cDNA 1500012F01 gene Details for - - RIKEN cDNA 1500012F01 gene GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 68949 Tuberculist Genomic Region
77633 microRNA 342 Details for - - microRNA 342 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 723909 Tuberculist Genomic Region	81703 G1 to S phase transition pseudogene Details for - - G1 to S phase transition pseudogene GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 77633 Tuberculist Genomic Region
14629 Jun dimerization protein 2 Details for - - Jun dimerization protein 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 81703 Tuberculist Genomic Region	22337 glutamate-cysteine ligase, catalytic subunit Details for - - glutamate-cysteine ligase, catalytic subunit GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 14629 Tuberculist Genomic Region
22339 vitamin D receptor Details for - - vitamin D receptor GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 22337 Tuberculist Genomic Region	269941 vascular endothelial growth factor A Details for - - vascular endothelial growth factor A GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 22339 Tuberculist Genomic Region
319454 chondroitin sulfate synthase 1 Details for - - chondroitin sulfate synthase 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 269941 Tuberculist Genomic Region	319955 regulatory associated protein of MTOR, complex 1, opposite strand Details for - - regulatory associated protein of MTOR, complex 1, opposite strand GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 319454 Tuberculist Genomic Region
329540 excision repair cross-complementing rodent repair deficiency, complementation group 6 Details for - - excision repair cross-complementing rodent repair deficiency, complementation group 6 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 319955 Tuberculist Genomic Region	378472 RIKEN cDNA 8430427H17 gene Details for RP23-204D17.2 - RIKEN cDNA 8430427H17 gene GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 329540 Tuberculist Genomic Region
382000 vault RNA component 5 Details for - - vault RNA component 5 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 378472 Tuberculist Genomic Region	58217 cDNA sequence AY761184 Details for - - cDNA sequence AY761184 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 382000 Tuberculist Genomic Region
628596 triggering receptor expressed on myeloid cells 1 Details for - - triggering receptor expressed on myeloid cells 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 58217 Tuberculist Genomic Region	112407 eukaryotic translation initiation factor 1 pseudogene Details for - - eukaryotic translation initiation factor 1 pseudogene GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 628596 Tuberculist Genomic Region
12703 EGL nine homolog 3 (C. elegans) Details for - - EGL nine homolog 3 (C. elegans) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 112407 Tuberculist Genomic Region	14173 suppressor of cytokine signaling 1 Details for - - suppressor of cytokine signaling 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 12703 Tuberculist Genomic Region
14706 fibroblast growth factor 2 Details for DN-452A22.6 - fibroblast growth factor 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 14173 Tuberculist Genomic Region	17133 guanine nucleotide binding protein (G protein), gamma 4 Details for - - guanine nucleotide binding protein (G protein), gamma 4 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 14706 Tuberculist Genomic Region
19073 v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian) Details for - - v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 17133 Tuberculist Genomic Region	20299 serglycin Details for - - serglycin GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 19073 Tuberculist Genomic Region
20448 chemokine (C-C motif) ligand 22 Details for - - chemokine (C-C motif) ligand 22 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 20299 Tuberculist Genomic Region	20698 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 Details for RP23-17P12.1 - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 20448 Tuberculist Genomic Region
216799 sphingosine kinase 1 Details for RP23-193A16.4 - sphingosine kinase 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 20698 Tuberculist Genomic Region	217069 NLR family, pyrin domain containing 3 Details for RP23-210M6.4 - NLR family, pyrin domain containing 3 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 216799 Tuberculist Genomic Region
236285 tripartite motif-containing 25 Details for RP23-176J13.7 - tripartite motif-containing 25 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 217069 Tuberculist Genomic Region	27279 LanC lantibiotic synthetase component C-like 3 (bacterial) Details for RP23-423L11.1 - LanC lantibiotic synthetase component C-like 3 (bacterial) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 236285 Tuberculist Genomic Region
380921 tumor necrosis factor receptor superfamily, member 12a Details for - - tumor necrosis factor receptor superfamily, member 12a GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 27279 Tuberculist Genomic Region	387609 diacylglycerol kinase, eta Details for mCG_120030 - diacylglycerol kinase, eta GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 380921 Tuberculist Genomic Region
50772 zinc fingers and homeoboxes 2 Details for - - zinc fingers and homeoboxes 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 387609 Tuberculist Genomic Region	68567 mitogen-activated protein kinase 6 Details for - - mitogen-activated protein kinase 6 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 50772 Tuberculist Genomic Region
69660 cell growth regulator with EF hand domain 1 Details for - - cell growth regulator with EF hand domain 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 68567 Tuberculist Genomic Region	70686 transmembrane BAX inhibitor motif containing 1 Details for - - transmembrane BAX inhibitor motif containing 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 69660 Tuberculist Genomic Region
74427 dual specificity phosphatase 16 Details for - - dual specificity phosphatase 16 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 70686 Tuberculist Genomic Region	80859 ELL associated factor 1 Details for - - ELL associated factor 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 74427 Tuberculist Genomic Region
16656 nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta Details for - - nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 80859 Tuberculist Genomic Region	192656 human immunodeficiency virus type I enhancer binding protein 3 Details for RP23-98J9.1 - human immunodeficiency virus type I enhancer binding protein 3 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 16656 Tuberculist Genomic Region
216850 receptor (TNFRSF)-interacting serine-threonine kinase 2 Details for RP23-378L22.1 - receptor (TNFRSF)-interacting serine-threonine kinase 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 192656 Tuberculist Genomic Region	24088 KDM1 lysine (K)-specific demethylase 6B Details for RP23-5O23.5 - KDM1 lysine (K)-specific demethylase 6B GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 216850 Tuberculist Genomic Region
75646 toll-like receptor 2 Details for - - toll-like receptor 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 24088 Tuberculist Genomic Region	76650 retinoic acid induced 14 Details for - - retinoic acid induced 14 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 75646 Tuberculist Genomic Region
71409 sulfiredoxin 1 homolog (S. cerevisiae) Details for - - sulfiredoxin 1 homolog (S. cerevisiae) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 76650 Tuberculist Genomic Region	Details for RP23-282A22.1 - formin-like 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 71409 Tuberculist Genomic Region

Summary

Members

Details for - - predicted gene, 17435

Details for - - predicted gene, 20114

Details for - - ankyrin repeat domain 28

Details for - - BCL2/adenovirus E1B interacting protein 3

Details for - - coagulation factor II (thrombin) receptor

Details for - - heparin-binding EGF-like growth factor

Details for - - human immunodeficiency virus type I enhancer binding protein 2

Details for - - heme oxygenase (decycling) 1

Details for - - immunoglobulin kappa constant

Details for - - interleukin 10 receptor, alpha

Details for - - interleukin 1 receptor, type I

Details for RP23-277B9.6 - vomeronasal 1 receptor 213

Details for - - metallothionein 2

Details for RP23-453B22.1 - oncostatin M

Details for - - predicted gene 22

Details for - - solute carrier family 39 (zinc transporter), member 14

Details for - - phosphatidylinositol binding clathrin assembly protein

Details for RP23-229A22.1 - basonuclin 2

Details for RP23-395O6.1 - ubiquitin domain containing 2

Details for - - shisa homolog 3 (Xenopus laevis)

Details for - - mastermind-like domain containing 1

Details for - - ERO1-like (S. cerevisiae)

Details for RP23-137L22.11-001 - stratifin

Details for RP23-348N2.1 - pleckstrin

Details for RP23-105M23.2 - UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5

Details for - - tubulin, alpha 1C pseudogene

Details for - - ribosomal protein L21 pseudogene

Details for - - RIKEN cDNA 1500012F01 gene

Details for - - microRNA 342

Details for - - G1 to S phase transition pseudogene

Details for - - Jun dimerization protein 2

Details for - - glutamate-cysteine ligase, catalytic subunit

Details for - - vitamin D receptor

Details for - - vascular endothelial growth factor A

Details for - - chondroitin sulfate synthase 1

Details for - - regulatory associated protein of MTOR, complex 1, opposite strand

Details for - - excision repair cross-complementing rodent repair deficiency, complementation group 6

Details for RP23-204D17.2 - RIKEN cDNA 8430427H17 gene

Details for - - vault RNA component 5

Details for - - cDNA sequence AY761184

Details for - - triggering receptor expressed on myeloid cells 1

Details for - - eukaryotic translation initiation factor 1 pseudogene

Details for - - EGL nine homolog 3 (C. elegans)

Details for - - suppressor of cytokine signaling 1

Details for DN-452A22.6 - fibroblast growth factor 2

Details for - - guanine nucleotide binding protein (G protein), gamma 4

Details for - - v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian)

Details for - - serglycin

Details for - - chemokine (C-C motif) ligand 22

Details for RP23-17P12.1 - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4

Details for RP23-193A16.4 - sphingosine kinase 1

Details for RP23-210M6.4 - NLR family, pyrin domain containing 3

Details for RP23-176J13.7 - tripartite motif-containing 25

Details for RP23-423L11.1 - LanC lantibiotic synthetase component C-like 3 (bacterial)

Details for - - tumor necrosis factor receptor superfamily, member 12a

Details for mCG_120030 - diacylglycerol kinase, eta

Details for - - zinc fingers and homeoboxes 2

Details for - - mitogen-activated protein kinase 6

Details for - - cell growth regulator with EF hand domain 1

Details for - - transmembrane BAX inhibitor motif containing 1

Details for - - dual specificity phosphatase 16

Details for - - ELL associated factor 1

Details for - - nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta

Details for RP23-98J9.1 - human immunodeficiency virus type I enhancer binding protein 3

Details for RP23-378L22.1 - receptor (TNFRSF)-interacting serine-threonine kinase 2

Details for RP23-5O23.5 - KDM1 lysine (K)-specific demethylase 6B

Details for - - toll-like receptor 2

Details for - - retinoic acid induced 14

Details for - - sulfiredoxin 1 homolog (S. cerevisiae)

Details for RP23-282A22.1 - formin-like 2

GO Terms

3p UTR PITA