TargetScan_114 megaCluster: 8 Residual: 0.26

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
TargetScan_114 8 0.26 15 0 0.873029 0
Displaying 1 - 50 of 50
102193 zinc finger, DHHC domain containing 7

Details for - - zinc finger, DHHC domain containing 7

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 102193

Tuberculist Genomic Region

106068 solute carrier family 45, member 4

Details for - - solute carrier family 45, member 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 106068

Tuberculist Genomic Region

107375 solute carrier family 25, member 45

Details for - - solute carrier family 25, member 45

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 107375

Tuberculist Genomic Region

110078 brain glycogen phosphorylase

Details for RP23-241M12.1 - brain glycogen phosphorylase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 110078

Tuberculist Genomic Region

15170 protein tyrosine phosphatase, non-receptor type 6

Details for - - protein tyrosine phosphatase, non-receptor type 6

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15170

Tuberculist Genomic Region

15184 histone deacetylase 5

Details for RP23-461C4.2 - histone deacetylase 5

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15184

Tuberculist Genomic Region

17686 mutS homolog 3 (E. coli)

Details for - - mutS homolog 3 (E. coli)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17686

Tuberculist Genomic Region

17916 myosin IF

Details for - - myosin IF

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17916

Tuberculist Genomic Region

18010 neuraminidase 1

Details for - - neuraminidase 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18010

Tuberculist Genomic Region

19414 RAS p21 protein activator 3

Details for - - RAS p21 protein activator 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 19414

Tuberculist Genomic Region

209011 sirtuin 7

Details for RP23-84C12.8 - sirtuin 7

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 209011

Tuberculist Genomic Region

209131 sorting nexin family member 30

Details for RP23-451K12.1 - sorting nexin family member 30

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 209131

Tuberculist Genomic Region

21841 cytotoxic granule-associated RNA binding protein 1

Details for - - cytotoxic granule-associated RNA binding protein 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 21841

Tuberculist Genomic Region

22368 transient receptor potential cation channel, subfamily V, member 2

Details for RP23-234K24.7 - transient receptor potential cation channel, subfamily V, member 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 22368

Tuberculist Genomic Region

226409 zinc finger, RAN-binding domain containing 3

Details for - - zinc finger, RAN-binding domain containing 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 226409

Tuberculist Genomic Region

231801 ArfGAP with FG repeats 2

Details for - - ArfGAP with FG repeats 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 231801

Tuberculist Genomic Region

24132 zinc finger protein 53

Details for - - zinc finger protein 53

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 24132

Tuberculist Genomic Region

26416 mitogen-activated protein kinase 14

Details for RP24-137E7.1 - mitogen-activated protein kinase 14

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 26416

Tuberculist Genomic Region

27357 glycogenin

Details for - - glycogenin

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 27357

Tuberculist Genomic Region

328801 zinc finger protein 414

Details for - - zinc finger protein 414

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 328801

Tuberculist Genomic Region

497652 adrenocortical dysplasia

Details for - - adrenocortical dysplasia

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 497652

Tuberculist Genomic Region

66682 trafficking protein particle complex 5

Details for - - trafficking protein particle complex 5

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66682

Tuberculist Genomic Region

67278 PAXIP1 associated glutamate rich protein 1A

Details for - - PAXIP1 associated glutamate rich protein 1A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67278

Tuberculist Genomic Region

68038 chitinase domain containing 1

Details for - - chitinase domain containing 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68038

Tuberculist Genomic Region

68082 dual specificity phosphatase 19

Details for RP23-393F9.2 - dual specificity phosphatase 19

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68082

Tuberculist Genomic Region

68188 symplekin

Details for - - symplekin

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68188

Tuberculist Genomic Region

69662 RIKEN cDNA 2310061I04 gene

Details for RP24-180B11.5 - RIKEN cDNA 2310061I04 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 69662

Tuberculist Genomic Region

69769 tumor necrosis factor, alpha-induced protein 8-like 2

Details for - - tumor necrosis factor, alpha-induced protein 8-like 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 69769

Tuberculist Genomic Region

72181 NOL1/NOP2/Sun domain family, member 4

Details for RP23-383D12.4 - NOL1/NOP2/Sun domain family, member 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 72181

Tuberculist Genomic Region

74616 secernin 3

Details for RP23-463K8.3 - secernin 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 74616

Tuberculist Genomic Region

74653 protein-O-mannose kinase

Details for - - protein-O-mannose kinase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 74653

Tuberculist Genomic Region

76773 WDYHV motif containing 1

Details for - - WDYHV motif containing 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 76773

Tuberculist Genomic Region

77938 family with sequence similarity 53, member B

Details for - - family with sequence similarity 53, member B

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 77938

Tuberculist Genomic Region

78829 TSC22 domain family, member 4

Details for - - TSC22 domain family, member 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 78829

Tuberculist Genomic Region

13144 death-associated protein kinase 3

Details for - - death-associated protein kinase 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 13144

Tuberculist Genomic Region

216011 leucine rich repeat containing 20

Details for - - leucine rich repeat containing 20

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 216011

Tuberculist Genomic Region

231279 GUF1 GTPase homolog (S. cerevisiae)

Details for - - GUF1 GTPase homolog (S. cerevisiae)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 231279

Tuberculist Genomic Region

232984 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8

Details for - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 232984

Tuberculist Genomic Region

235461 family with sequence similarity 63, member B

Details for - - family with sequence similarity 63, member B

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 235461

Tuberculist Genomic Region

23885 germ cell-less homolog 1 (Drosophila)

Details for - - germ cell-less homolog 1 (Drosophila)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 23885

Tuberculist Genomic Region

240068 zinc finger protein 563

Details for RP24-63E7.2 - zinc finger protein 563

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 240068

Tuberculist Genomic Region

242557 autophagy related 4C, cysteine peptidase

Details for RP23-59N8.1 - autophagy related 4C, cysteine peptidase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 242557

Tuberculist Genomic Region

56032 nitrogen permease regulator-like 2

Details for - - nitrogen permease regulator-like 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 56032

Tuberculist Genomic Region

219144 ADP-ribosylation factor-like 11

Details for - - ADP-ribosylation factor-like 11

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 219144

Tuberculist Genomic Region

22700 zinc finger protein 40

Details for RP24-440M15.1 - zinc finger protein 40

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 22700

Tuberculist Genomic Region

230101 glucosidase beta 2

Details for RP23-191F22.2 - glucosidase beta 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 230101

Tuberculist Genomic Region

408022 primase and polymerase (DNA-directed)

Details for - - primase and polymerase (DNA-directed)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 408022

Tuberculist Genomic Region

68366 transmembrane protein 129

Details for - - transmembrane protein 129

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68366

Tuberculist Genomic Region

68731 ribosome binding factor A

Details for - - ribosome binding factor A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68731

Tuberculist Genomic Region

69091 vacuolar protein sorting 26 homolog B (yeast)

Details for - - vacuolar protein sorting 26 homolog B (yeast)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 69091

Tuberculist Genomic Region

TFs percTargets pValue
V_T3RBETA_Q6_01_M02119 0.78 0.0000106
Displaying 1 - 1 of 1
GO Terms
NA
Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
1.02 CTGCGC Zfp161.2 1.01 GCGCAGGC V$ZFP206_01_M01742
Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
0.41 GGCGCG NA NA 0.5 CNNGCTGG NA NA

3p UTR PITA

miRNAs percTargets pValue
NA
miRNAs percTargets pValue
mmu-miR-3966 0.4 0.000023
Log in or register to post comments