TargetScan_128 megaCluster: 5 Residual: 0.28

Summary

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
TargetScan_128 5 0.28 15 0 0.870338 0

Members

Displaying 1 - 43 of 43
11549 adrenergic receptor, alpha 1a

Details for - - adrenergic receptor, alpha 1a

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 11549

Tuberculist Genomic Region

14705 Bernardinelli-Seip congenital lipodystrophy 2 homolog (human)

Details for MNCb-2630 - Bernardinelli-Seip congenital lipodystrophy 2 homolog (human)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14705

Tuberculist Genomic Region

14735 glypican 4

Details for RP23-309D15.3 - glypican 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14735

Tuberculist Genomic Region

14941 granzyme D

Details for - - granzyme D

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14941

Tuberculist Genomic Region

15932 iduronidase, alpha-L-

Details for - - iduronidase, alpha-L-

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15932

Tuberculist Genomic Region

17999 neural precursor cell expressed, developmentally down-regulated 4

Details for - - neural precursor cell expressed, developmentally down-regulated 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17999

Tuberculist Genomic Region

210925 integrator complex subunit 9

Details for - - integrator complex subunit 9

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 210925

Tuberculist Genomic Region

215160 rhomboid domain containing 2

Details for - - rhomboid domain containing 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 215160

Tuberculist Genomic Region

22770 zinc fingers and homeoboxes 1

Details for - - zinc fingers and homeoboxes 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 22770

Tuberculist Genomic Region

230770 transmembrane protein 39b

Details for RP23-151A15.10-002 - transmembrane protein 39b

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 230770

Tuberculist Genomic Region

23892 gremlin 1

Details for RP23-178K16.1 - gremlin 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 23892

Tuberculist Genomic Region

240613 RIKEN cDNA 9930021J03 gene

Details for - - RIKEN cDNA 9930021J03 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 240613

Tuberculist Genomic Region

240690 suppression of tumorigenicity 18

Details for - - suppression of tumorigenicity 18

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 240690

Tuberculist Genomic Region

266632 interleukin-1 receptor-associated kinase 4

Details for - - interleukin-1 receptor-associated kinase 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 266632

Tuberculist Genomic Region

269003 Sin3A associated protein

Details for - - Sin3A associated protein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 269003

Tuberculist Genomic Region

28075 desumoylating isopeptidase 1

Details for - - desumoylating isopeptidase 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 28075

Tuberculist Genomic Region

414077 cDNA sequence BC056474

Details for - - cDNA sequence BC056474

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 414077

Tuberculist Genomic Region

52837 thioredoxin-related transmembrane protein 4

Details for RP23-207F4.1 - thioredoxin-related transmembrane protein 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 52837

Tuberculist Genomic Region

54342 glucosamine-phosphate N-acetyltransferase 1

Details for - - glucosamine-phosphate N-acetyltransferase 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 54342

Tuberculist Genomic Region

55988 sorting nexin 12

Details for RP23-356J7.1 - sorting nexin 12

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 55988

Tuberculist Genomic Region

57319 sphingomyelin phosphodiesterase, acid-like 3A

Details for - - sphingomyelin phosphodiesterase, acid-like 3A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 57319

Tuberculist Genomic Region

66043 ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit

Details for - - ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66043

Tuberculist Genomic Region

76884 cytoplasmic FMR1 interacting protein 2

Details for RP23-370F7.1 - cytoplasmic FMR1 interacting protein 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 76884

Tuberculist Genomic Region

100494 zinc finger, AN1-type domain 2A

Details for - - zinc finger, AN1-type domain 2A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100494

Tuberculist Genomic Region

100502843 predicted gene, 19408

Details for - - predicted gene, 19408

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100502843

Tuberculist Genomic Region

102122 family with sequence similarity 192, member A

Details for - - family with sequence similarity 192, member A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 102122

Tuberculist Genomic Region

106025 SHANK-associated RH domain interacting protein

Details for - - SHANK-associated RH domain interacting protein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 106025

Tuberculist Genomic Region

110558 histocompatibility 2, Q region locus 9

Details for - - histocompatibility 2, Q region locus 9

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 110558

Tuberculist Genomic Region

116871 metastasis associated 3

Details for - - metastasis associated 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 116871

Tuberculist Genomic Region

13136 CD55 antigen

Details for AC111067.1 - CD55 antigen

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 13136

Tuberculist Genomic Region

15040 histocompatibility 2, T region locus 23

Details for - - histocompatibility 2, T region locus 23

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15040

Tuberculist Genomic Region

16633 killer cell lectin-like receptor, subfamily A, member 2

Details for - - killer cell lectin-like receptor, subfamily A, member 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16633

Tuberculist Genomic Region

17354 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10

Details for RP23-349H7.1 - myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17354

Tuberculist Genomic Region

20612 sialic acid binding Ig-like lectin 1, sialoadhesin

Details for RP23-228H14.5 - sialic acid binding Ig-like lectin 1, sialoadhesin

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20612

Tuberculist Genomic Region

227700 SH3-domain GRB2-like endophilin B2

Details for RP23-395P6.5 - SH3-domain GRB2-like endophilin B2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 227700

Tuberculist Genomic Region

234779 phospholipase C, gamma 2

Details for - - phospholipase C, gamma 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 234779

Tuberculist Genomic Region

269999 ORAI calcium release-activated calcium modulator 3

Details for - - ORAI calcium release-activated calcium modulator 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 269999

Tuberculist Genomic Region

50706 periostin, osteoblast specific factor

Details for - - periostin, osteoblast specific factor

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 50706

Tuberculist Genomic Region

66889 ring finger protein 128

Details for MNCb-3816 - ring finger protein 128

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66889

Tuberculist Genomic Region

67803 LIM domain containing 2

Details for RP23-81G14.8 - LIM domain containing 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67803

Tuberculist Genomic Region

69156 catechol-O-methyltransferase domain containing 1

Details for - - catechol-O-methyltransferase domain containing 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 69156

Tuberculist Genomic Region

75406 NADH dehydrogenase (ubiquinone) Fe-S protein 7

Details for - - NADH dehydrogenase (ubiquinone) Fe-S protein 7

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 75406

Tuberculist Genomic Region

76633 RIKEN cDNA 1700112E06 gene

Details for - - RIKEN cDNA 1700112E06 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 76633

Tuberculist Genomic Region

TFBS DB TF

TFs percTargets pValue
V_SPZ1_01_M00446 0.738095 0.0000252

GO Terms

Displaying 1 - 1 of 1
GO Terms
NA

Upstream MEME Motif

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif2 E-Value Motif2 Consensus Motif2 Matches
0.012 AGAARAAGGMAA NA 0.25 AAAMAMAAATNW NA

Upstream Weeder Motif

Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
1.07 GCGTCG NA 1.05 GGCGNCGC NA

3p UTR Weeder

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
0.31 AACCNT NA NA 0.54 CNCCATAG NA NA

3p UTR PITA

miRNAs percTargets pValue
NA

3p UTR TargetScan

miRNAs percTargets pValue
NA

Add comment

Log in or register to post comments