TargetScan_139 megaCluster: 6 Residual: 0.19

Summary

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
TargetScan_139 6 0.19 15 0 0.93756 0

Members

Displaying 1 - 48 of 48
105988 extra spindle pole bodies 1 (S. cerevisiae)

Details for - - extra spindle pole bodies 1 (S. cerevisiae)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 105988

Tuberculist Genomic Region

14583 glutamine fructose-6-phosphate transaminase 1

Details for - - glutamine fructose-6-phosphate transaminase 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14583

Tuberculist Genomic Region

18472 platelet-activating factor acetylhydrolase, isoform 1b, subunit 1

Details for RP23-194P5.2 - platelet-activating factor acetylhydrolase, isoform 1b, subunit 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18472

Tuberculist Genomic Region

20422 split hand/foot malformation (ectrodactyly) type 1

Details for - - split hand/foot malformation (ectrodactyly) type 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20422

Tuberculist Genomic Region

20637 small nuclear ribonucleoprotein 70 (U1)

Details for - - small nuclear ribonucleoprotein 70 (U1)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20637

Tuberculist Genomic Region

26399 mitogen-activated protein kinase kinase 6

Details for RP23-162E10.1 - mitogen-activated protein kinase kinase 6

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 26399

Tuberculist Genomic Region

27055 FK506 binding protein 9

Details for - - FK506 binding protein 9

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 27055

Tuberculist Genomic Region

50875 tropomodulin 3

Details for - - tropomodulin 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 50875

Tuberculist Genomic Region

66231 THO complex 7 homolog (Drosophila)

Details for - - THO complex 7 homolog (Drosophila)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66231

Tuberculist Genomic Region

66413 proteasome (prosome, macropain) 26S subunit, non-ATPase, 6

Details for - - proteasome (prosome, macropain) 26S subunit, non-ATPase, 6

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66413

Tuberculist Genomic Region

66599 RAD52 motif 1

Details for RP23-382C19.5 - RAD52 motif 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66599

Tuberculist Genomic Region

66694 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1

Details for - - ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66694

Tuberculist Genomic Region

67103 prostaglandin reductase 1

Details for RP23-211P15.3 - prostaglandin reductase 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67103

Tuberculist Genomic Region

72657 RIKEN cDNA 2700094K13 gene

Details for - - RIKEN cDNA 2700094K13 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 72657

Tuberculist Genomic Region

76915 meiotic nuclear divisions 1 homolog (S. cerevisiae)

Details for - - meiotic nuclear divisions 1 homolog (S. cerevisiae)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 76915

Tuberculist Genomic Region

76936 heterogeneous nuclear ribonucleoprotein M

Details for RP24-225N8.1 - heterogeneous nuclear ribonucleoprotein M

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 76936

Tuberculist Genomic Region

99730 TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor

Details for RP23-128G10.3 - TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 99730

Tuberculist Genomic Region

100043636 expressed sequence AI662270

Details for - - expressed sequence AI662270

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100043636

Tuberculist Genomic Region

104184 bleomycin hydrolase

Details for RP23-100P23.3 - bleomycin hydrolase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 104184

Tuberculist Genomic Region

11749 annexin A6

Details for - - annexin A6

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 11749

Tuberculist Genomic Region

12452 cyclin G2

Details for - - cyclin G2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12452

Tuberculist Genomic Region

14148 ferredoxin 1

Details for - - ferredoxin 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14148

Tuberculist Genomic Region

17181 matrilin 2

Details for - - matrilin 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17181

Tuberculist Genomic Region

18518 immunoglobulin (CD79A) binding protein 1

Details for - - immunoglobulin (CD79A) binding protein 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18518

Tuberculist Genomic Region

19038 peptidylprolyl isomerase C

Details for - - peptidylprolyl isomerase C

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 19038

Tuberculist Genomic Region

216618 coiled-coil domain containing 104

Details for RP23-393O10.2 - coiled-coil domain containing 104

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 216618

Tuberculist Genomic Region

378702 small EDRK-rich factor 2

Details for - - small EDRK-rich factor 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 378702

Tuberculist Genomic Region

52432 protein phosphatase 2, regulatory subunit B, delta

Details for - - protein phosphatase 2, regulatory subunit B, delta

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 52432

Tuberculist Genomic Region

56338 thioredoxin interacting protein

Details for - - thioredoxin interacting protein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 56338

Tuberculist Genomic Region

56354 DnaJ (Hsp40) homolog, subfamily C, member 7

Details for RP23-390D17.1 - DnaJ (Hsp40) homolog, subfamily C, member 7

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 56354

Tuberculist Genomic Region

66643 limb expression 1 homolog (chicken)

Details for - - limb expression 1 homolog (chicken)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66643

Tuberculist Genomic Region

667803 RIKEN cDNA C920025E04 gene

Details for - - RIKEN cDNA C920025E04 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 667803

Tuberculist Genomic Region

68099 family with sequence similarity 92, member A

Details for RP24-215D6.5 - family with sequence similarity 92, member A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68099

Tuberculist Genomic Region

69019 signal peptidase complex subunit 1 homolog (S. cerevisiae)

Details for - - signal peptidase complex subunit 1 homolog (S. cerevisiae)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 69019

Tuberculist Genomic Region

74359 RIKEN cDNA 4931414P19 gene

Details for - - RIKEN cDNA 4931414P19 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 74359

Tuberculist Genomic Region

80286 tumor suppressor candidate 3

Details for - - tumor suppressor candidate 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 80286

Tuberculist Genomic Region

21881 transketolase

Details for - - transketolase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 21881

Tuberculist Genomic Region

66537 proteasome maturation protein

Details for - - proteasome maturation protein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66537

Tuberculist Genomic Region

317717 SEC22 vesicle trafficking protein homolog A (S. cerevisiae)

Details for - - SEC22 vesicle trafficking protein homolog A (S. cerevisiae)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 317717

Tuberculist Genomic Region

54405 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1

Details for RP23-43O20.5 - NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 54405

Tuberculist Genomic Region

66526 transcription elongation factor A (SII) N-terminal and central domain containing 2

Details for - - transcription elongation factor A (SII) N-terminal and central domain containing 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66526

Tuberculist Genomic Region

68776 TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor

Details for RP24-258K7.3 - TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68776

Tuberculist Genomic Region

72391 cyclin-dependent kinase inhibitor 3

Details for - - cyclin-dependent kinase inhibitor 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 72391

Tuberculist Genomic Region

17992 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4

Details for - - NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17992

Tuberculist Genomic Region

53381 peroxiredoxin 4

Details for RP23-395K13.3 - peroxiredoxin 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 53381

Tuberculist Genomic Region

68832 RIKEN cDNA 1110057K04 gene

Details for - - RIKEN cDNA 1110057K04 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68832

Tuberculist Genomic Region

213742 inactive X specific transcripts

Details for - - inactive X specific transcripts

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 213742

Tuberculist Genomic Region

70536 glutaminyl-peptide cyclotransferase (glutaminyl cyclase)

Details for - - glutaminyl-peptide cyclotransferase (glutaminyl cyclase)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 70536

Tuberculist Genomic Region

TFBS DB TF

TFs percTargets pValue
NA

GO Terms

Displaying 1 - 1 of 1
GO Terms
NA

Upstream MEME Motif

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif2 E-Value Motif2 Consensus Motif2 Matches
1.3e-27 AAAAAARAAAMA NA 0.033 ACANNTTTAAAA NA

Upstream Weeder Motif

Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
1.3 CGCGTC NA 1.31 CNNCGCGC E2F2.1, Zfp161.2, E2F3.1

3p UTR Weeder

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
0.45 AAGGAT NA NA 0.46 NGANGGTT NA NA

3p UTR PITA

miRNAs percTargets pValue
NA

3p UTR TargetScan

miRNAs percTargets pValue
NA

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