TargetScan_144 megaCluster: 11 Residual: 0.17

Summary

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
TargetScan_144 11 0.17 15 0 0.942168 0

Members

Displaying 1 - 56 of 56
114641 ribosomal protein L31

Details for - - ribosomal protein L31

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 114641

Tuberculist Genomic Region

11739 solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 4

Details for - - solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 11739

Tuberculist Genomic Region

13480 dolichol-phosphate (beta-D) mannosyltransferase 1

Details for RP23-391M18.1 - dolichol-phosphate (beta-D) mannosyltransferase 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 13480

Tuberculist Genomic Region

15893 islet cell autoantigen 1

Details for - - islet cell autoantigen 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15893

Tuberculist Genomic Region

18203 N-terminal Asn amidase

Details for - - N-terminal Asn amidase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18203

Tuberculist Genomic Region

216864 macrophage galactose N-acetyl-galactosamine specific lectin 2

Details for DN-476D14.2 - macrophage galactose N-acetyl-galactosamine specific lectin 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 216864

Tuberculist Genomic Region

22142 tubulin, alpha 1A

Details for - - tubulin, alpha 1A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 22142

Tuberculist Genomic Region

30932 zinc finger protein 330

Details for - - zinc finger protein 330

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 30932

Tuberculist Genomic Region

56532 receptor-interacting serine-threonine kinase 3

Details for - - receptor-interacting serine-threonine kinase 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 56532

Tuberculist Genomic Region

68114 melanoma associated antigen (mutated) 1

Details for - - melanoma associated antigen (mutated) 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68114

Tuberculist Genomic Region

69574 carboxymethylenebutenolidase-like (Pseudomonas)

Details for - - carboxymethylenebutenolidase-like (Pseudomonas)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 69574

Tuberculist Genomic Region

72562 pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2

Details for - - pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 72562

Tuberculist Genomic Region

75957 Mir17 host gene 1 (non-protein coding)

Details for - - Mir17 host gene 1 (non-protein coding)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 75957

Tuberculist Genomic Region

98985 CLP1, cleavage and polyadenylation factor I subunit

Details for RP23-399J8.1 - CLP1, cleavage and polyadenylation factor I subunit

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 98985

Tuberculist Genomic Region

110446 acetyl-Coenzyme A acetyltransferase 1

Details for - - acetyl-Coenzyme A acetyltransferase 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 110446

Tuberculist Genomic Region

17149 mago-nashi homolog, proliferation-associated (Drosophila)

Details for RP23-40G2.2 - mago-nashi homolog, proliferation-associated (Drosophila)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17149

Tuberculist Genomic Region

26611 reticulocalbin 2

Details for - - reticulocalbin 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 26611

Tuberculist Genomic Region

26901 differentially expressed in B16F10 1

Details for - - differentially expressed in B16F10 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 26901

Tuberculist Genomic Region

66155 ubiquitin-fold modifier conjugating enzyme 1

Details for - - ubiquitin-fold modifier conjugating enzyme 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66155

Tuberculist Genomic Region

66181 NOP10 ribonucleoprotein

Details for RP23-63C10.4 - NOP10 ribonucleoprotein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66181

Tuberculist Genomic Region

68015 TNF receptor-associated protein 1

Details for - - TNF receptor-associated protein 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68015

Tuberculist Genomic Region

68971 TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)

Details for - - TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68971

Tuberculist Genomic Region

70083 meteorin, glial cell differentiation regulator

Details for - - meteorin, glial cell differentiation regulator

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 70083

Tuberculist Genomic Region

71340 RIO kinase 1 (yeast)

Details for - - RIO kinase 1 (yeast)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 71340

Tuberculist Genomic Region

723891 microRNA 19a

Details for - - microRNA 19a

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 723891

Tuberculist Genomic Region

72569 Bardet-Biedl syndrome 5 (human)

Details for RP23-436E15.1 - Bardet-Biedl syndrome 5 (human)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 72569

Tuberculist Genomic Region

75939 RIKEN cDNA 4930579G24 gene

Details for - - RIKEN cDNA 4930579G24 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 75939

Tuberculist Genomic Region

93671 CD163 antigen

Details for - - CD163 antigen

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 93671

Tuberculist Genomic Region

109785 phosphoglucomutase 3

Details for - - phosphoglucomutase 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 109785

Tuberculist Genomic Region

12237 budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae)

Details for - - budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12237

Tuberculist Genomic Region

19352 RAB geranylgeranyl transferase, b subunit

Details for - - RAB geranylgeranyl transferase, b subunit

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 19352

Tuberculist Genomic Region

28030 G elongation factor, mitochondrial 1

Details for - - G elongation factor, mitochondrial 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 28030

Tuberculist Genomic Region

53317 pleiotropic regulator 1, PRL1 homolog (Arabidopsis)

Details for - - pleiotropic regulator 1, PRL1 homolog (Arabidopsis)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 53317

Tuberculist Genomic Region

56529 SEC11 homolog A (S. cerevisiae)

Details for - - SEC11 homolog A (S. cerevisiae)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 56529

Tuberculist Genomic Region

66191 immediate early response 3 interacting protein 1

Details for - - immediate early response 3 interacting protein 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66191

Tuberculist Genomic Region

66411 tubulin folding cofactor B

Details for - - tubulin folding cofactor B

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66411

Tuberculist Genomic Region

66904 propionyl Coenzyme A carboxylase, beta polypeptide

Details for - - propionyl Coenzyme A carboxylase, beta polypeptide

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66904

Tuberculist Genomic Region

66975 trafficking protein particle complex 13

Details for - - trafficking protein particle complex 13

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66975

Tuberculist Genomic Region

68202 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5

Details for - - NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68202

Tuberculist Genomic Region

11532 alcohol dehydrogenase 5 (class III), chi polypeptide

Details for - - alcohol dehydrogenase 5 (class III), chi polypeptide

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 11532

Tuberculist Genomic Region

18634 peroxisomal biogenesis factor 7

Details for - - peroxisomal biogenesis factor 7

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18634

Tuberculist Genomic Region

20196 S100 calcium binding protein A13

Details for - - S100 calcium binding protein A13

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20196

Tuberculist Genomic Region

26411 mitogen-activated protein kinase kinase kinase kinase 1

Details for - - mitogen-activated protein kinase kinase kinase kinase 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 26411

Tuberculist Genomic Region

52653 NudC domain containing 2

Details for RP23-382C18.4 - NudC domain containing 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 52653

Tuberculist Genomic Region

54638 coiled-coil domain containing 22

Details for - - coiled-coil domain containing 22

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 54638

Tuberculist Genomic Region

56451 succinate-CoA ligase, GDP-forming, alpha subunit

Details for - - succinate-CoA ligase, GDP-forming, alpha subunit

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 56451

Tuberculist Genomic Region

68080 GPN-loop GTPase 3

Details for - - GPN-loop GTPase 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68080

Tuberculist Genomic Region

68263 pyruvate dehydrogenase (lipoamide) beta

Details for - - pyruvate dehydrogenase (lipoamide) beta

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68263

Tuberculist Genomic Region

68603 phosphomevalonate kinase

Details for - - phosphomevalonate kinase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68603

Tuberculist Genomic Region

69957 CDC16 cell division cycle 16

Details for - - CDC16 cell division cycle 16

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 69957

Tuberculist Genomic Region

71881 adipocyte plasma membrane associated protein

Details for RP23-156P22.2 - adipocyte plasma membrane associated protein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 71881

Tuberculist Genomic Region

27360 adducin 3 (gamma)

Details for - - adducin 3 (gamma)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 27360

Tuberculist Genomic Region

52683 non-SMC condensin II complex, subunit H2

Details for - - non-SMC condensin II complex, subunit H2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 52683

Tuberculist Genomic Region

17992 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4

Details for - - NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17992

Tuberculist Genomic Region

53381 peroxiredoxin 4

Details for RP23-395K13.3 - peroxiredoxin 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 53381

Tuberculist Genomic Region

70536 glutaminyl-peptide cyclotransferase (glutaminyl cyclase)

Details for - - glutaminyl-peptide cyclotransferase (glutaminyl cyclase)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 70536

Tuberculist Genomic Region

TFBS DB TF

TFs percTargets pValue
NA

GO Terms

Displaying 1 - 1 of 1
GO Terms
NA

Upstream MEME Motif

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif2 E-Value Motif2 Consensus Motif2 Matches
1.8e-21 AAAAAAAAAAA NA 0.0015 TANANTTTAAAA NA

Upstream Weeder Motif

Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
1.14 GACGCG NA 1.15 CGCGACGT Max.2

3p UTR Weeder

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
0.43 GTCNTA NA NA 0.44 CGGGNGAT NA NA

3p UTR PITA

miRNAs percTargets pValue
NA

3p UTR TargetScan

miRNAs percTargets pValue
NA

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