TargetScan_181 megaCluster: 11 Residual: 0.15 | Macrophage Network Portal

Summary

Title	Cluster	Residual	Bicluster Conditions	Residual Permutation P-Value	Var. Exp. First PC	Var. Exp. First PC Perm. P-Value
TargetScan_181	11	0.15	15	0	0.958711	0

Members

Displaying 1 - 36 of 36

117197 biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino Details for - - biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 117197 Tuberculist Genomic Region	171580 microtubule associated monooxygenase, calponin and LIM domain containing 1 Details for - - microtubule associated monooxygenase, calponin and LIM domain containing 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 171580 Tuberculist Genomic Region
17992 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4 Details for - - NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 17992 Tuberculist Genomic Region	213742 inactive X specific transcripts Details for - - inactive X specific transcripts GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 213742 Tuberculist Genomic Region
317717 SEC22 vesicle trafficking protein homolog A (S. cerevisiae) Details for - - SEC22 vesicle trafficking protein homolog A (S. cerevisiae) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 317717 Tuberculist Genomic Region	330502 zinc finger protein 82 Details for - - zinc finger protein 82 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 330502 Tuberculist Genomic Region
53381 peroxiredoxin 4 Details for RP23-395K13.3 - peroxiredoxin 4 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 53381 Tuberculist Genomic Region	66537 proteasome maturation protein Details for - - proteasome maturation protein GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 66537 Tuberculist Genomic Region
66861 DnaJ (Hsp40) homolog, subfamily C, member 10 Details for RP23-282M14.2 - DnaJ (Hsp40) homolog, subfamily C, member 10 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 66861 Tuberculist Genomic Region	68328 RAB13, member RAS oncogene family Details for - - RAB13, member RAS oncogene family GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 68328 Tuberculist Genomic Region
68603 phosphomevalonate kinase Details for - - phosphomevalonate kinase GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 68603 Tuberculist Genomic Region	70536 glutaminyl-peptide cyclotransferase (glutaminyl cyclase) Details for - - glutaminyl-peptide cyclotransferase (glutaminyl cyclase) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 70536 Tuberculist Genomic Region
93675 C-type lectin domain family 2, member i Details for - - C-type lectin domain family 2, member i GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 93675 Tuberculist Genomic Region	13191 solute carrier family 33 (acetyl-CoA transporter), member 1 Details for - - solute carrier family 33 (acetyl-CoA transporter), member 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 11416 Tuberculist Genomic Region
13480 dynactin 1 Details for - - dynactin 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 13191 Tuberculist Genomic Region	14583 dolichol-phosphate (beta-D) mannosyltransferase 1 Details for RP23-391M18.1 - dolichol-phosphate (beta-D) mannosyltransferase 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 13480 Tuberculist Genomic Region
19184 glutamine fructose-6-phosphate transaminase 1 Details for - - glutamine fructose-6-phosphate transaminase 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 14583 Tuberculist Genomic Region	20409 protease (prosome, macropain) 26S subunit, ATPase 5 Details for RP23-418O11.3 - protease (prosome, macropain) 26S subunit, ATPase 5 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 19184 Tuberculist Genomic Region
23971 osteoclast stimulating factor 1 Details for - - osteoclast stimulating factor 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 20409 Tuberculist Genomic Region	26399 3'-phosphoadenosine 5'-phosphosulfate synthase 1 Details for - - 3'-phosphoadenosine 5'-phosphosulfate synthase 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 23971 Tuberculist Genomic Region
52713 mitogen-activated protein kinase kinase 6 Details for RP23-162E10.1 - mitogen-activated protein kinase kinase 6 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 26399 Tuberculist Genomic Region	56529 coiled-coil domain containing 59 Details for - - coiled-coil domain containing 59 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 52713 Tuberculist Genomic Region
58230 SEC11 homolog A (S. cerevisiae) Details for - - SEC11 homolog A (S. cerevisiae) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 56529 Tuberculist Genomic Region	66231 ring finger protein 8 Details for - - ring finger protein 8 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 58230 Tuberculist Genomic Region
66526 THO complex 7 homolog (Drosophila) Details for - - THO complex 7 homolog (Drosophila) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 66231 Tuberculist Genomic Region	66983 transcription elongation factor A (SII) N-terminal and central domain containing 2 Details for - - transcription elongation factor A (SII) N-terminal and central domain containing 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 66526 Tuberculist Genomic Region
67864 zinc finger protein 830 Details for RP23-316C11.5 - zinc finger protein 830 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 66983 Tuberculist Genomic Region	68832 Yip1 domain family, member 4 Details for - - Yip1 domain family, member 4 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 67864 Tuberculist Genomic Region
69163 RIKEN cDNA 1110057K04 gene Details for - - RIKEN cDNA 1110057K04 gene GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 68832 Tuberculist Genomic Region	70356 mitochondrial ribosomal protein L44 Details for - - mitochondrial ribosomal protein L44 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 69163 Tuberculist Genomic Region
74375 suppression of tumorigenicity 13 Details for - - suppression of tumorigenicity 13 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 70356 Tuberculist Genomic Region	83410 golgi coiled coil 1 Details for - - golgi coiled coil 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 74375 Tuberculist Genomic Region
98985 cleavage stimulation factor, 3' pre-RNA subunit 2, tau Details for - - cleavage stimulation factor, 3' pre-RNA subunit 2, tau GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 83410 Tuberculist Genomic Region	70415 CLP1, cleavage and polyadenylation factor I subunit Details for RP23-399J8.1 - CLP1, cleavage and polyadenylation factor I subunit GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 98985 Tuberculist Genomic Region
71881 RIKEN cDNA 2610018G03 gene Details for RP23-245F8.1 - RIKEN cDNA 2610018G03 gene GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 70415 Tuberculist Genomic Region	Details for RP23-156P22.2 - adipocyte plasma membrane associated protein GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 71881 Tuberculist Genomic Region

TFBS DB TF

TFs	percTargets	pValue
NA

GO Terms

Displaying 1 - 1 of 1

GO Terms
NA

Upstream MEME Motif

Motif1 E-Value	Motif1 Consensus	Motif1 Matches	Motif2 E-Value	Motif2 Consensus	Motif2 Matches
0.00013	AAAARAAAAAA	NA	1.9	ACAGAGAGGAAA	NA

Upstream Weeder Motif

Motif1 Score	Motif1 Consensus	Motif1 Matches	Motif2 Score	Motif2 Consensus	Motif2 Matches
1.19	GCGCGA	V$ZFP161_04_M02933, V$E2F_03_M00516, V$E2F1_Q3_01_M00938, V$E2F_Q6_01_M00920, V$E2F4DP1_01_M00738, V$E2F2_03_M02742, V$E2F_02_M00050, V$ZF5_01_M00716, V$E2F_01_M00024, V$E2F1DP1RB_01_M00740, Zfp161.2, E2F2.1, E2F3.1, Zfp161.1	1.4	CCGCGCCT	V$E2F_Q2_M00803, Bcl6b.2, Zfp410.1, Sp4.2

3p UTR Weeder

Motif1 E-Value	Motif1 Consensus	Motif1 Matches	Motif1 Model	Motif2 E-Value	Motif2 Consensus	Motif2 Matches	Motif2 Model
0.58	ATATTC	NA	NA	0.6	NAATATTC	NA	NA

3p UTR PITA

miRNAs	percTargets	pValue
NA

3p UTR TargetScan

miRNAs	percTargets	pValue
mmu-miR-615-3p	0.1875	0.000038

Add comment

Log in or register to post comments