TargetScan_196 megaCluster: 11 Residual: 0.12

Summary

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
TargetScan_196 11 0.12 15 0 0.972648 0

Members

Displaying 1 - 33 of 33
19348 kinesin family member 20A

Details for - - kinesin family member 20A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 19348

Tuberculist Genomic Region

381293 kinesin family member 14

Details for - - kinesin family member 14

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 381293

Tuberculist Genomic Region

382051 pyruvate dehyrogenase phosphatase catalytic subunit 2

Details for - - pyruvate dehyrogenase phosphatase catalytic subunit 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 382051

Tuberculist Genomic Region

387175 microRNA 15b

Details for - - microRNA 15b

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 387175

Tuberculist Genomic Region

108912 cell division cycle associated 2

Details for - - cell division cycle associated 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 108912

Tuberculist Genomic Region

12316 asp (abnormal spindle)-like, microcephaly associated (Drosophila)

Details for AC158946.1 - asp (abnormal spindle)-like, microcephaly associated (Drosophila)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12316

Tuberculist Genomic Region

12532 cell division cycle 25C

Details for - - cell division cycle 25C

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12532

Tuberculist Genomic Region

12704 citron

Details for - - citron

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12704

Tuberculist Genomic Region

14793 cell division cycle associated 3

Details for - - cell division cycle associated 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14793

Tuberculist Genomic Region

15366 hyaluronan mediated motility receptor (RHAMM)

Details for RP23-382C18.3 - hyaluronan mediated motility receptor (RHAMM)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15366

Tuberculist Genomic Region

16571 kinesin family member 4

Details for RP23-213F21.3 - kinesin family member 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16571

Tuberculist Genomic Region

170459 StAR-related lipid transfer (START) domain containing 4

Details for - - StAR-related lipid transfer (START) domain containing 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 170459

Tuberculist Genomic Region

19362 RAD51 associated protein 1

Details for - - RAD51 associated protein 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 19362

Tuberculist Genomic Region

20249 stearoyl-Coenzyme A desaturase 1

Details for - - stearoyl-Coenzyme A desaturase 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20249

Tuberculist Genomic Region

20878 aurora kinase A

Details for - - aurora kinase A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20878

Tuberculist Genomic Region

219114 spindle and kinetochore associated complex subunit 3

Details for - - spindle and kinetochore associated complex subunit 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 219114

Tuberculist Genomic Region

22137 Ttk protein kinase

Details for - - Ttk protein kinase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 22137

Tuberculist Genomic Region

229841 centromere protein E

Details for - - centromere protein E

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 229841

Tuberculist Genomic Region

268697 cyclin B1

Details for - - cyclin B1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 268697

Tuberculist Genomic Region

277468 solute carrier family 39 (zinc transporter), member 12

Details for RP23-378I2.1 - solute carrier family 39 (zinc transporter), member 12

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 277468

Tuberculist Genomic Region

404710 IQ motif containing GTPase activating protein 3

Details for - - IQ motif containing GTPase activating protein 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 404710

Tuberculist Genomic Region

56419 diaphanous homolog 3 (Drosophila)

Details for - - diaphanous homolog 3 (Drosophila)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 56419

Tuberculist Genomic Region

56702 histone cluster 1, H1b

Details for RP23-138F20.13-001 - histone cluster 1, H1b

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 56702

Tuberculist Genomic Region

67121 microtubule associated serine/threonine kinase-like

Details for - - microtubule associated serine/threonine kinase-like

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67121

Tuberculist Genomic Region

68026 RIKEN cDNA 2810417H13 gene

Details for - - RIKEN cDNA 2810417H13 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68026

Tuberculist Genomic Region

70466 cytoskeleton associated protein 2-like

Details for RP23-160G19.6 - cytoskeleton associated protein 2-like

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 70466

Tuberculist Genomic Region

73804 kinesin family member 2C

Details for RP23-59L24.10-001 - kinesin family member 2C

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 73804

Tuberculist Genomic Region

77782 polymerase (DNA directed), theta

Details for - - polymerase (DNA directed), theta

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 77782

Tuberculist Genomic Region

83815 centromere protein Q

Details for - - centromere protein Q

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 83815

Tuberculist Genomic Region

208628 kinetochore associated 1

Details for - - kinetochore associated 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 208628

Tuberculist Genomic Region

71819 kinesin family member 23

Details for - - kinesin family member 23

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 71819

Tuberculist Genomic Region

12449 cyclin F

Details for - - cyclin F

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12449

Tuberculist Genomic Region

17279 maternal embryonic leucine zipper kinase

Details for RP23-382O11.1 - maternal embryonic leucine zipper kinase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17279

Tuberculist Genomic Region

TFBS DB TF

TFs percTargets pValue
V_NFYA_Q5_M02106 0.75 0.00000000000116

GO Terms

Displaying 1 - 1 of 1
GO Terms
NA

Upstream MEME Motif

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif2 E-Value Motif2 Consensus Motif2 Matches
0.000000000018 AGCCAATCAGN NFYA_MA0060.1, V$NFYA_Q5_M02106, V$NFYC_Q5_M02107, V$NFY_01_M00287, V$NFY_C_M00209, V$NFY_Q6_M00185, V$ALPHACP1_01_M00687, V$CAAT_01_M00254, V$NFY_Q6_01_M00775, V$IPF1_02_M01234, V$CAAT_C_M00200, V$DUXL_01_M01390, V$DUXBL_01_M02968, Duxl.1 0.0000000048 TTTKTTNTYTTT NA

Upstream Weeder Motif

Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
1.27 ATTGGC V$CAAT_01_M00254, V$ALPHACP1_01_M00687, V$NFYA_Q5_M02106 1.57 TGATTGGC NFYA_MA0060.1, V$NFYA_Q5_M02106, V$CAAT_01_M00254, V$NFYC_Q5_M02107, V$NFY_Q6_01_M00775, V$NFY_Q6_M00185, V$NFY_01_M00287, V$CAAT_C_M00200, V$NFY_C_M00209

3p UTR Weeder

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
0.54 GTCTCN NA NA 0.66 GTANGCCG NA NA

3p UTR PITA

miRNAs percTargets pValue
NA

3p UTR TargetScan

miRNAs percTargets pValue
NA

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