TargetScan_197 megaCluster: 5 Residual: 0.27

Summary

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
TargetScan_197 5 0.27 15 0 0.86194 0

Members

Displaying 1 - 36 of 36
16068 interleukin 18 binding protein

Details for - - interleukin 18 binding protein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16068

Tuberculist Genomic Region

71772 phospholipase B domain containing 2

Details for - - phospholipase B domain containing 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 71772

Tuberculist Genomic Region

100041482 cadherin 11 pseudogene

Details for - - cadherin 11 pseudogene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100041482

Tuberculist Genomic Region

106338 NOL1/NOP2/Sun domain family member 3

Details for - - NOL1/NOP2/Sun domain family member 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 106338

Tuberculist Genomic Region

11432 acid phosphatase 2, lysosomal

Details for RP23-20F9.7 - acid phosphatase 2, lysosomal

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 11432

Tuberculist Genomic Region

12862 cytochrome c oxidase subunit VIa polypeptide 2

Details for - - cytochrome c oxidase subunit VIa polypeptide 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12862

Tuberculist Genomic Region

13179 decorin

Details for - - decorin

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 13179

Tuberculist Genomic Region

13544 dishevelled 3, dsh homolog (Drosophila)

Details for - - dishevelled 3, dsh homolog (Drosophila)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 13544

Tuberculist Genomic Region

16658 v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian)

Details for RP23-333A18.1 - v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16658

Tuberculist Genomic Region

20304 chemokine (C-C motif) ligand 5

Details for RP23-320E6.2 - chemokine (C-C motif) ligand 5

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20304

Tuberculist Genomic Region

20555 schlafen 1

Details for RP23-308N3.1 - schlafen 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20555

Tuberculist Genomic Region

211556 adaptor-related protein complex 1 associated regulatory protein

Details for - - adaptor-related protein complex 1 associated regulatory protein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 211556

Tuberculist Genomic Region

215772 androglobin

Details for - - androglobin

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 215772

Tuberculist Genomic Region

217119 xylosyltransferase II

Details for RP23-290B5.5 - xylosyltransferase II

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 217119

Tuberculist Genomic Region

225010 lysocardiolipin acyltransferase 1

Details for RP23-294D3.1 - lysocardiolipin acyltransferase 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 225010

Tuberculist Genomic Region

237256 zinc finger CCCH type containing 12D

Details for - - zinc finger CCCH type containing 12D

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 237256

Tuberculist Genomic Region

243371 leucine rich repeat containing 61

Details for - - leucine rich repeat containing 61

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 243371

Tuberculist Genomic Region

26446 proteasome (prosome, macropain) subunit, beta type 3

Details for RP23-94N18.8 - proteasome (prosome, macropain) subunit, beta type 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 26446

Tuberculist Genomic Region

269800 zinc finger protein 384

Details for - - zinc finger protein 384

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 269800

Tuberculist Genomic Region

328833 triggering receptor expressed on myeloid cells-like 2

Details for - - triggering receptor expressed on myeloid cells-like 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 328833

Tuberculist Genomic Region

381524 expressed sequence AI427809

Details for - - expressed sequence AI427809

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 381524

Tuberculist Genomic Region

434325 transmembrane protein 221

Details for - - transmembrane protein 221

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 434325

Tuberculist Genomic Region

50721 sirtuin 6

Details for - - sirtuin 6

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 50721

Tuberculist Genomic Region

544817 Rho GTPase activating protein 27

Details for RP23-341C5.7 - Rho GTPase activating protein 27

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 544817

Tuberculist Genomic Region

55988 sorting nexin 12

Details for RP23-356J7.1 - sorting nexin 12

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 55988

Tuberculist Genomic Region

57248 lymphocyte antigen 6 complex, locus I

Details for - - lymphocyte antigen 6 complex, locus I

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 57248

Tuberculist Genomic Region

64380 membrane-spanning 4-domains, subfamily A, member 4C

Details for - - membrane-spanning 4-domains, subfamily A, member 4C

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 64380

Tuberculist Genomic Region

66632 diphthamine biosynthesis 6

Details for RP23-177D21.1 - diphthamine biosynthesis 6

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66632

Tuberculist Genomic Region

72324 R3H domain containing 2

Details for - - R3H domain containing 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 71750

Tuberculist Genomic Region

74306 plexin domain containing 1

Details for RP23-309H19.1 - plexin domain containing 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 72324

Tuberculist Genomic Region

76884 protease, serine 46

Details for - - protease, serine 46

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 74306

Tuberculist Genomic Region

77976 cytoplasmic FMR1 interacting protein 2

Details for RP23-370F7.1 - cytoplasmic FMR1 interacting protein 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 76884

Tuberculist Genomic Region

80517 NUAK family, SNF1-like kinase, 1

Details for - - NUAK family, SNF1-like kinase, 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 77976

Tuberculist Genomic Region

81897 HERPUD family member 2

Details for MNCb-2040 - HERPUD family member 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 80517

Tuberculist Genomic Region

15559 toll-like receptor 9

Details for - - toll-like receptor 9

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 81897

Tuberculist Genomic Region

Details for - - 5-hydroxytryptamine (serotonin) receptor 2B

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15559

Tuberculist Genomic Region

TFBS DB TF

TFs percTargets pValue
Foxa2.2 0.176471 0.0000585

GO Terms

Displaying 1 - 1 of 1
GO Terms
NA

Upstream MEME Motif

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif2 E-Value Motif2 Consensus Motif2 Matches
0.00063 ARAAAANAAAAA NA 75000 CCWYCCCWSNC Bcl6b.2, Sox13.2, Zfp281.2

Upstream Weeder Motif

Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
0.81 AAGCGG NA 0.85 CAAGCGGT NA

3p UTR Weeder

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
0.48 ACGCGC NA NA 0.62 TTCNTCCC NA NA

3p UTR PITA

miRNAs percTargets pValue
NA

3p UTR TargetScan

miRNAs percTargets pValue
mmu-miR-466i-5p 0.333333 0.00000941

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