TargetScan_211 megaCluster: 11 Residual: 0.16

Summary

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
TargetScan_211 11 0.16 15 0 0.954075 0

Members

Displaying 1 - 27 of 27
12315 calmodulin 3

Details for - - calmodulin 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12315

Tuberculist Genomic Region

27061 B cell receptor associated protein 31

Details for RP23-329M9.5 - B cell receptor associated protein 31

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 27061

Tuberculist Genomic Region

101513 MOB kinase activator 2

Details for - - MOB kinase activator 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 101513

Tuberculist Genomic Region

11757 peroxiredoxin 3

Details for - - peroxiredoxin 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 11757

Tuberculist Genomic Region

15199 heme binding protein 1

Details for - - heme binding protein 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15199

Tuberculist Genomic Region

15388 heterogeneous nuclear ribonucleoprotein L

Details for - - heterogeneous nuclear ribonucleoprotein L

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15388

Tuberculist Genomic Region

20280 sterol carrier protein 2, liver

Details for RP23-84A23.1 - sterol carrier protein 2, liver

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20280

Tuberculist Genomic Region

217333 tripartite motif-containing 47

Details for RP23-42F6.7 - tripartite motif-containing 47

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 217333

Tuberculist Genomic Region

21770 protein phosphatase 2, regulatory subunit B', delta

Details for - - protein phosphatase 2, regulatory subunit B', delta

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 21770

Tuberculist Genomic Region

21933 tumor necrosis factor receptor superfamily, member 10b

Details for - - tumor necrosis factor receptor superfamily, member 10b

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 21933

Tuberculist Genomic Region

26371 cytosolic iron-sulfur protein assembly 1

Details for RP23-206D14.3 - cytosolic iron-sulfur protein assembly 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 26371

Tuberculist Genomic Region

28040 DNA segment, Chr 6, Wayne State University 163, expressed

Details for - - DNA segment, Chr 6, Wayne State University 163, expressed

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 28040

Tuberculist Genomic Region

52469 cytochrome C oxidase assembly factor 3

Details for RP23-281C18.10-001 - cytochrome C oxidase assembly factor 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 52469

Tuberculist Genomic Region

56046 ubiquinol-cytochrome c reductase complex assembly factor 1

Details for RP23-380B10.2 - ubiquinol-cytochrome c reductase complex assembly factor 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 56046

Tuberculist Genomic Region

57344 arsenic (+3 oxidation state) methyltransferase

Details for - - arsenic (+3 oxidation state) methyltransferase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 57344

Tuberculist Genomic Region

66046 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5

Details for - - NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66046

Tuberculist Genomic Region

66258 mitochondrial ribosomal protein S17

Details for - - mitochondrial ribosomal protein S17

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66258

Tuberculist Genomic Region

66385 protein phosphatase 1, regulatory (inhibitor) subunit 7

Details for - - protein phosphatase 1, regulatory (inhibitor) subunit 7

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66385

Tuberculist Genomic Region

66925 succinate dehydrogenase complex, subunit D, integral membrane protein

Details for UNQ5809 - succinate dehydrogenase complex, subunit D, integral membrane protein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66925

Tuberculist Genomic Region

66975 trafficking protein particle complex 13

Details for - - trafficking protein particle complex 13

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66975

Tuberculist Genomic Region

67881 magnesium-dependent phosphatase 1

Details for - - magnesium-dependent phosphatase 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67881

Tuberculist Genomic Region

68021 biphenyl hydrolase-like (serine hydrolase, breast epithelial mucin-associated antigen)

Details for - - biphenyl hydrolase-like (serine hydrolase, breast epithelial mucin-associated antigen)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68021

Tuberculist Genomic Region

68347 RIKEN cDNA 0610011F06 gene

Details for - - RIKEN cDNA 0610011F06 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68347

Tuberculist Genomic Region

69790 mediator complex subunit 30

Details for - - mediator complex subunit 30

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 69790

Tuberculist Genomic Region

72634 tudor and KH domain containing protein

Details for - - tudor and KH domain containing protein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 72634

Tuberculist Genomic Region

83409 late endosomal/lysosomal adaptor, MAPK and MTOR activator 2

Details for - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 83409

Tuberculist Genomic Region

11532 alcohol dehydrogenase 5 (class III), chi polypeptide

Details for - - alcohol dehydrogenase 5 (class III), chi polypeptide

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 11532

Tuberculist Genomic Region

TFBS DB TF

TFs percTargets pValue
NA

GO Terms

Displaying 1 - 1 of 1
GO Terms
NA

Upstream MEME Motif

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif2 E-Value Motif2 Consensus Motif2 Matches
0.0056 AAAMAAAAANAA Foxd3_MA0041.1, FOXI1_MA0042.1 7100 CTCMRGCTCCN NA

Upstream Weeder Motif

Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
1.25 GCGTCA NA 1.38 GCGCGTTC NA

3p UTR Weeder

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
0.6 CGCGGT NA NA 0.73 GNGCCNTT mmu-mir-337-5p 7mer_a1

3p UTR PITA

miRNAs percTargets pValue
NA

3p UTR TargetScan

miRNAs percTargets pValue
NA

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