TargetScan_214 megaCluster: 11 Residual: 0.38

Summary

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
TargetScan_214 11 0.38 14 0 0.750392 0.216

Members

Displaying 1 - 21 of 21
11732 progressive ankylosis

Details for - - progressive ankylosis

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 11732

Tuberculist Genomic Region

14360 Fyn proto-oncogene

Details for - - Fyn proto-oncogene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14360

Tuberculist Genomic Region

100503773 predicted gene, 19886

Details for - - predicted gene, 19886

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100503773

Tuberculist Genomic Region

100503948 predicted gene, 19983

Details for - - predicted gene, 19983

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100503948

Tuberculist Genomic Region

105171 arrestin domain containing 3

Details for - - arrestin domain containing 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 105171

Tuberculist Genomic Region

108160 family with sequence similarity 50, member A

Details for - - family with sequence similarity 50, member A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 108160

Tuberculist Genomic Region

114893 DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)

Details for - - DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 114893

Tuberculist Genomic Region

13382 dihydrolipoamide dehydrogenase

Details for - - dihydrolipoamide dehydrogenase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 13382

Tuberculist Genomic Region

14874 glutathione transferase zeta 1 (maleylacetoacetate isomerase)

Details for - - glutathione transferase zeta 1 (maleylacetoacetate isomerase)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14874

Tuberculist Genomic Region

212508 mitochondrial GTPase 1 homolog (S. cerevisiae)

Details for - - mitochondrial GTPase 1 homolog (S. cerevisiae)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 212508

Tuberculist Genomic Region

22099 translin

Details for - - translin

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 22099

Tuberculist Genomic Region

229317 eukaryotic translation initiation factor 2A

Details for - - eukaryotic translation initiation factor 2A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 229317

Tuberculist Genomic Region

26370 centrin 2

Details for RP23-307G22.3 - centrin 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 26370

Tuberculist Genomic Region

277692 ribosomal protein S19, pseudogene 3

Details for RP23-406N5.1 - ribosomal protein S19, pseudogene 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 277692

Tuberculist Genomic Region

319504 neuron-glia-CAM-related cell adhesion molecule

Details for - - neuron-glia-CAM-related cell adhesion molecule

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 319504

Tuberculist Genomic Region

56520 NME/NM23 nucleoside diphosphate kinase 4

Details for - - NME/NM23 nucleoside diphosphate kinase 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 56520

Tuberculist Genomic Region

628308 predicted gene 14420

Details for - - predicted gene 14420

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 628308

Tuberculist Genomic Region

66094 LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)

Details for - - LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66094

Tuberculist Genomic Region

67097 ribosomal protein S10

Details for RP24-535O17.1 - ribosomal protein S10

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67097

Tuberculist Genomic Region

67204 eukaryotic translation initiation factor 2, subunit 2 (beta)

Details for RP23-480H10.3 - eukaryotic translation initiation factor 2, subunit 2 (beta)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67204

Tuberculist Genomic Region

76972 RIKEN cDNA 2810008D09 gene

Details for - - RIKEN cDNA 2810008D09 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 76972

Tuberculist Genomic Region

TFBS DB TF

TFs percTargets pValue
NA

GO Terms

Displaying 1 - 1 of 1
GO Terms
NA

Upstream MEME Motif

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif2 E-Value Motif2 Consensus Motif2 Matches
2 AAAKAAAWAAA FOXI1_MA0042.1 19000 GNMAANCAGGGR NA

Upstream Weeder Motif

Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
1.71 CGCACG NA 1.74 GNNCGCCG NA

3p UTR Weeder

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
0.83 GTAACTAG NA NA NA NA NA

3p UTR PITA

miRNAs percTargets pValue
NA

3p UTR TargetScan

miRNAs percTargets pValue
NA

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