TargetScan_43 megaCluster: 8 Residual: 0.22

Summary

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
TargetScan_43 8 0.22 15 0 0.915557 0

Members

Displaying 1 - 43 of 43
101185 protection of telomeres 1A

Details for - - protection of telomeres 1A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 101185

Tuberculist Genomic Region

103140 glutathione S-transferase, theta 3

Details for - - glutathione S-transferase, theta 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 103140

Tuberculist Genomic Region

11727 angiogenin, ribonuclease, RNase A family, 5

Details for - - angiogenin, ribonuclease, RNase A family, 5

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 11727

Tuberculist Genomic Region

14768 LanC (bacterial lantibiotic synthetase component C)-like 1

Details for AC133187.1 - LanC (bacterial lantibiotic synthetase component C)-like 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14768

Tuberculist Genomic Region

15925 insulin degrading enzyme

Details for - - insulin degrading enzyme

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15925

Tuberculist Genomic Region

16865 eukaryotic translation initiation factor 2D

Details for - - eukaryotic translation initiation factor 2D

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16865

Tuberculist Genomic Region

207425 WD repeat domain 11

Details for - - WD repeat domain 11

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 207425

Tuberculist Genomic Region

216829 membrane magnesium transporter 2

Details for - - membrane magnesium transporter 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 216829

Tuberculist Genomic Region

217830 RIKEN cDNA 9030617O03 gene

Details for - - RIKEN cDNA 9030617O03 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 217830

Tuberculist Genomic Region

29807 thiamine pyrophosphokinase

Details for - - thiamine pyrophosphokinase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 29807

Tuberculist Genomic Region

330812 ring finger protein 150

Details for - - ring finger protein 150

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 330812

Tuberculist Genomic Region

380912 zinc finger protein 395

Details for - - zinc finger protein 395

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 380912

Tuberculist Genomic Region

381062 ER membrane associated RNA degradation

Details for - - ER membrane associated RNA degradation

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 381062

Tuberculist Genomic Region

56043 aldo-keto reductase family 1, member E1

Details for - - aldo-keto reductase family 1, member E1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 56043

Tuberculist Genomic Region

56454 aldehyde dehydrogenase 18 family, member A1

Details for - - aldehyde dehydrogenase 18 family, member A1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 56454

Tuberculist Genomic Region

66928 transmembrane protein 261

Details for RP24-200F10.1 - transmembrane protein 261

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66928

Tuberculist Genomic Region

67623 transmembrane 7 superfamily member 3

Details for RP23-158O11.3 - transmembrane 7 superfamily member 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67623

Tuberculist Genomic Region

72017 cytochrome b5 reductase 1

Details for - - cytochrome b5 reductase 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 72017

Tuberculist Genomic Region

76850 argonaute RISC catalytic subunit 4

Details for RP23-204N19.3 - argonaute RISC catalytic subunit 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 76850

Tuberculist Genomic Region

100504653 RIKEN cDNA 4930555A03 gene

Details for - - RIKEN cDNA 4930555A03 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100504653

Tuberculist Genomic Region

103784 WD repeat domain 92

Details for RP23-32H19.3 - WD repeat domain 92

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 103784

Tuberculist Genomic Region

108902 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1

Details for - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 108902

Tuberculist Genomic Region

16403 integrin alpha 6

Details for RP23-5K9.4 - integrin alpha 6

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16403

Tuberculist Genomic Region

20336 exocyst complex component 4

Details for - - exocyst complex component 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20336

Tuberculist Genomic Region

215789 phosphatase and actin regulator 2

Details for RP23-104K14.1 - phosphatase and actin regulator 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 215789

Tuberculist Genomic Region

232334 vestigial like 4 (Drosophila)

Details for - - vestigial like 4 (Drosophila)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 232334

Tuberculist Genomic Region

53330 vesicle-associated membrane protein 4

Details for - - vesicle-associated membrane protein 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 53330

Tuberculist Genomic Region

64099 parvin, gamma

Details for RP23-23A6.2 - parvin, gamma

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 64099

Tuberculist Genomic Region

66375 dehydrogenase/reductase (SDR family) member 7

Details for - - dehydrogenase/reductase (SDR family) member 7

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66375

Tuberculist Genomic Region

66446 exosome component 7

Details for - - exosome component 7

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66446

Tuberculist Genomic Region

67168 lysophosphatidic acid receptor 6

Details for - - lysophosphatidic acid receptor 6

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67168

Tuberculist Genomic Region

67943 mesoderm development candidate 2

Details for - - mesoderm development candidate 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67943

Tuberculist Genomic Region

68055 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit S

Details for - - ATP synthase, H+ transporting, mitochondrial F0 complex, subunit S

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68055

Tuberculist Genomic Region

69478 RIKEN cDNA 2300009A05 gene

Details for - - RIKEN cDNA 2300009A05 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 69478

Tuberculist Genomic Region

329416 nitric oxide synthase trafficker

Details for RP23-431D4.2 - nitric oxide synthase trafficker

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 329416

Tuberculist Genomic Region

329727 DENN/MADD domain containing 2C

Details for - - DENN/MADD domain containing 2C

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 329727

Tuberculist Genomic Region

68318 anterior pharynx defective 1c homolog (C. elegans)

Details for - - anterior pharynx defective 1c homolog (C. elegans)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68318

Tuberculist Genomic Region

72512 transmembrane protein 173

Details for - - transmembrane protein 173

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 72512

Tuberculist Genomic Region

12846 catechol-O-methyltransferase

Details for - - catechol-O-methyltransferase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12846

Tuberculist Genomic Region

170936 zinc finger protein 369

Details for - - zinc finger protein 369

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 170936

Tuberculist Genomic Region

20503 solute carrier family 16 (monocarboxylic acid transporters), member 7

Details for - - solute carrier family 16 (monocarboxylic acid transporters), member 7

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20503

Tuberculist Genomic Region

231670 F-box protein 21

Details for - - F-box protein 21

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 231670

Tuberculist Genomic Region

70223 asparaginyl-tRNA synthetase

Details for - - asparaginyl-tRNA synthetase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 70223

Tuberculist Genomic Region

TFBS DB TF

TFs percTargets pValue
V_BBX_03_M02739 0.121951 0.0000246

GO Terms

Displaying 1 - 1 of 1
GO Terms
NA

Upstream MEME Motif

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif2 E-Value Motif2 Consensus Motif2 Matches
1.7e-19 AAAAAAAAAAAA NA 3.2 AAMAGGAAGAA V$ELF1_Q5_M01266

Upstream Weeder Motif

Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
0.96 TACGCG NA 1.06 CGCGCCTN V$E2F_Q2_M00803, Sp4.2, E2F2.1, Bcl6b.2, E2F3.1, Zfp410.1

3p UTR Weeder

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
0.41 TCGTCG NA NA 0.59 NNCCGTAT NA NA

3p UTR PITA

miRNAs percTargets pValue
NA

3p UTR TargetScan

miRNAs percTargets pValue
mmu-miR-3079-3p 0.435897 0.00000118

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