TargetScan_58 megaCluster: 8 Residual: 0.11 | Macrophage Network Portal

Summary

Title	Cluster	Residual	Bicluster Conditions	Residual Permutation P-Value	Var. Exp. First PC	Var. Exp. First PC Perm. P-Value
TargetScan_58	8	0.11	15	0	0.978322	0

Members

Displaying 1 - 20 of 20

105513 charged multivesicular body protein 7 Details for - - charged multivesicular body protein 7 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 105513 Tuberculist Genomic Region	109900 argininosuccinate lyase Details for - - argininosuccinate lyase GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 109900 Tuberculist Genomic Region
12412 chromobox 1 Details for RP23-353J21.1 - chromobox 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 12412 Tuberculist Genomic Region	12757 clathrin, light polypeptide (Lca) Details for RP23-209M8.4 - clathrin, light polypeptide (Lca) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 12757 Tuberculist Genomic Region
234865 nucleoporin 133 Details for - - nucleoporin 133 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 234865 Tuberculist Genomic Region	52469 cytochrome C oxidase assembly factor 3 Details for RP23-281C18.10-001 - cytochrome C oxidase assembly factor 3 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 52469 Tuberculist Genomic Region
66841 electron transferring flavoprotein, dehydrogenase Details for - - electron transferring flavoprotein, dehydrogenase GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 66841 Tuberculist Genomic Region	71735 leucine-rich repeats and WD repeat domain containing 1 Details for - - leucine-rich repeats and WD repeat domain containing 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 71735 Tuberculist Genomic Region
13666 eukaryotic translation initiation factor 2 alpha kinase 3 Details for - - eukaryotic translation initiation factor 2 alpha kinase 3 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 13666 Tuberculist Genomic Region	14227 FK506 binding protein 2 Details for - - FK506 binding protein 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 14227 Tuberculist Genomic Region
14375 X-ray repair complementing defective repair in Chinese hamster cells 6 Details for - - X-ray repair complementing defective repair in Chinese hamster cells 6 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 14375 Tuberculist Genomic Region	19355 RAD1 homolog (S. pombe) Details for - - RAD1 homolog (S. pombe) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 19355 Tuberculist Genomic Region
20822 TROVE domain family, member 2 Details for AL592403.2 - TROVE domain family, member 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 20822 Tuberculist Genomic Region	224111 UBX domain protein 7 Details for - - UBX domain protein 7 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 224111 Tuberculist Genomic Region
230661 testis-specific kinase 2 Details for RP23-109A3.2 - testis-specific kinase 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 230661 Tuberculist Genomic Region	26385 G protein-coupled receptor kinase 6 Details for - - G protein-coupled receptor kinase 6 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 26385 Tuberculist Genomic Region
272396 threonyl-tRNA synthetase-like 2 Details for - - threonyl-tRNA synthetase-like 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 272396 Tuberculist Genomic Region	65098 zinc finger, AN1-type domain 6 Details for - - zinc finger, AN1-type domain 6 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 65098 Tuberculist Genomic Region
76568 intraflagellar transport 46 Details for - - intraflagellar transport 46 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 76568 Tuberculist Genomic Region	99167 synovial sarcoma, X breakpoint 2 interacting protein Details for - - synovial sarcoma, X breakpoint 2 interacting protein GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 99167 Tuberculist Genomic Region

TFBS DB TF

TFs	percTargets	pValue
Zfp281.2, V_SP1_02_M01303, V_ZFP281_01_M01597	1, 1, 1	0

GO Terms

Displaying 1 - 1 of 1

GO Terms
NA

Upstream MEME Motif

Motif1 E-Value	Motif1 Consensus	Motif1 Matches	Motif2 E-Value	Motif2 Consensus	Motif2 Matches
59	CCAAWCAGAAN	V$NFY_C_M00209	5800	CMAANNAGAAA	NA

Upstream Weeder Motif

Motif1 Score	Motif1 Consensus	Motif1 Matches	Motif2 Score	Motif2 Consensus	Motif2 Matches
1.46	CGTCGC	NA	1.85	GCGACGAA	NA

3p UTR Weeder

Motif1 E-Value	Motif1 Consensus	Motif1 Matches	Motif1 Model	Motif2 E-Value	Motif2 Consensus	Motif2 Matches	Motif2 Model
0.62	CCGCGA	NA	NA	0.85	CCGNGATA	NA	NA

3p UTR PITA

miRNAs	percTargets	pValue
NA

3p UTR TargetScan

miRNAs	percTargets	pValue
NA

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