TargetScan_67 megaCluster: 2 Residual: 0.24

Summary

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
TargetScan_67 2 0.24 15 0 0.895893 0

Members

Displaying 1 - 36 of 36
209488 hematopoietic SH2 domain containing

Details for - - hematopoietic SH2 domain containing

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 209488

Tuberculist Genomic Region

211798 major facilitator superfamily domain containing 9

Details for - - major facilitator superfamily domain containing 9

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 211798

Tuberculist Genomic Region

231712 TRAF type zinc finger domain containing 1

Details for - - TRAF type zinc finger domain containing 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 231712

Tuberculist Genomic Region

237253 low density lipoprotein receptor-related protein 11

Details for - - low density lipoprotein receptor-related protein 11

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 237253

Tuberculist Genomic Region

27416 ATP-binding cassette, sub-family C (CFTR/MRP), member 5

Details for - - ATP-binding cassette, sub-family C (CFTR/MRP), member 5

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 27416

Tuberculist Genomic Region

277414 transformation related protein 53 inducible protein 11

Details for RP23-217C12.1 - transformation related protein 53 inducible protein 11

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 277414

Tuberculist Genomic Region

381560 X Kell blood group precursor related family member 8 homolog

Details for RP23-442A20.2 - X Kell blood group precursor related family member 8 homolog

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 381560

Tuberculist Genomic Region

434325 transmembrane protein 221

Details for - - transmembrane protein 221

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 434325

Tuberculist Genomic Region

71279 solute carrier family 29 (nucleoside transporters), member 3

Details for - - solute carrier family 29 (nucleoside transporters), member 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 71279

Tuberculist Genomic Region

71733 sushi domain containing 2

Details for - - sushi domain containing 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 71733

Tuberculist Genomic Region

72075 opioid growth factor receptor

Details for RP23-74K21.5 - opioid growth factor receptor

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 72075

Tuberculist Genomic Region

74153 ubiquitin-like modifier activating enzyme 7

Details for - - ubiquitin-like modifier activating enzyme 7

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 74153

Tuberculist Genomic Region

77578 B cell CLL/lymphoma 9

Details for - - B cell CLL/lymphoma 9

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 77578

Tuberculist Genomic Region

78830 solute carrier family 25 (mitochondrial carrier, Aralar), member 12

Details for RP23-299A2.2 - solute carrier family 25 (mitochondrial carrier, Aralar), member 12

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 78830

Tuberculist Genomic Region

98432 PH domain and leucine rich repeat protein phosphatase 1

Details for - - PH domain and leucine rich repeat protein phosphatase 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 98432

Tuberculist Genomic Region

110751 a disintegrin and metallopeptidase domain 33

Details for RP23-228H14.4 - a disintegrin and metallopeptidase domain 33

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 110751

Tuberculist Genomic Region

11610 angiotensin II, type I receptor-associated protein

Details for RP23-139J21.6 - angiotensin II, type I receptor-associated protein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 11610

Tuberculist Genomic Region

13003 versican

Details for - - versican

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 13003

Tuberculist Genomic Region

14254 FMS-like tyrosine kinase 1

Details for - - FMS-like tyrosine kinase 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14254

Tuberculist Genomic Region

19419 RAS guanyl releasing protein 1

Details for RP23-73I19.3 - RAS guanyl releasing protein 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 19419

Tuberculist Genomic Region

20471 sine oculis-related homeobox 1

Details for - - sine oculis-related homeobox 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20471

Tuberculist Genomic Region

209590 interleukin 23 receptor

Details for - - interleukin 23 receptor

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 209590

Tuberculist Genomic Region

233575 post-GPI attachment to proteins 2

Details for - - post-GPI attachment to proteins 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 233575

Tuberculist Genomic Region

23797 thymoma viral proto-oncogene 3

Details for - - thymoma viral proto-oncogene 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 23797

Tuberculist Genomic Region

30925 SLAM family member 6

Details for - - SLAM family member 6

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 30925

Tuberculist Genomic Region

319880 transmembrane and coiled coil domains 3

Details for - - transmembrane and coiled coil domains 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 319880

Tuberculist Genomic Region

56318 acid phosphatase, prostate

Details for 9.104100899-104272570.1 - acid phosphatase, prostate

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 56318

Tuberculist Genomic Region

56380 AT rich interactive domain 3B (BRIGHT-like)

Details for - - AT rich interactive domain 3B (BRIGHT-like)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 56380

Tuberculist Genomic Region

629303 predicted gene 11435

Details for RP23-320E6.1 - predicted gene 11435

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 629303

Tuberculist Genomic Region

666926 predicted gene 8369

Details for - - predicted gene 8369

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 666926

Tuberculist Genomic Region

69440 DENN/MADD domain containing 6B

Details for - - DENN/MADD domain containing 6B

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 69440

Tuberculist Genomic Region

70086 cysteinyl leukotriene receptor 2

Details for - - cysteinyl leukotriene receptor 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 70086

Tuberculist Genomic Region

71782 ankyrin repeat and LEM domain containing 2

Details for - - ankyrin repeat and LEM domain containing 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 71782

Tuberculist Genomic Region

74568 mixed lineage kinase domain-like

Details for - - mixed lineage kinase domain-like

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 74568

Tuberculist Genomic Region

76624 RIKEN cDNA 1700099I09 gene

Details for - - RIKEN cDNA 1700099I09 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 76624

Tuberculist Genomic Region

77590 carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15

Details for - - carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 77590

Tuberculist Genomic Region

TFBS DB TF

TFs percTargets pValue
EWSR1-FLI1_MA0149.1, V_EWSR1FLI1_01_M02252 0.828571, 0.828571 0.0000596

GO Terms

Displaying 1 - 1 of 1
GO Terms
NA

Upstream MEME Motif

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif2 E-Value Motif2 Consensus Motif2 Matches
0.016 AARRAAAAMAA NA 53 TWTNTTTAANTA NA

Upstream Weeder Motif

Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
0.9 ACGGCG NA 0.94 CGNCCCGG

3p UTR Weeder

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
0.73 TGGGATTC NA NA NA NA NA

3p UTR PITA

miRNAs percTargets pValue
mmu-miR-204, mmu-miR-211 0.76 0.0000535

3p UTR TargetScan

miRNAs percTargets pValue
mmu-miR-691 0.517241 0.0000413

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