TargetScan_85 megaCluster: 5 Residual: 0.28

Summary

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
TargetScan_85 5 0.28 11 0 0.747114 0.114

Members

Displaying 1 - 47 of 47
100038947 signal-regulatory protein beta 1-like

Details for - - signal-regulatory protein beta 1-like

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100038947

Tuberculist Genomic Region

100494 zinc finger, AN1-type domain 2A

Details for - - zinc finger, AN1-type domain 2A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100494

Tuberculist Genomic Region

100502843 predicted gene, 19408

Details for - - predicted gene, 19408

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100502843

Tuberculist Genomic Region

100503664 predicted gene 13012

Details for - - predicted gene 13012

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100503664

Tuberculist Genomic Region

102060 growth arrest and DNA-damage-inducible, gamma interacting protein 1

Details for - - growth arrest and DNA-damage-inducible, gamma interacting protein 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 102060

Tuberculist Genomic Region

110109 NOP2 nucleolar protein

Details for - - NOP2 nucleolar protein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 110109

Tuberculist Genomic Region

110557 histocompatibility 2, Q region locus 6

Details for - - histocompatibility 2, Q region locus 6

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 110557

Tuberculist Genomic Region

116871 metastasis associated 3

Details for - - metastasis associated 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 116871

Tuberculist Genomic Region

13136 CD55 antigen

Details for AC111067.1 - CD55 antigen

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 13136

Tuberculist Genomic Region

13481 dolichol-phosphate (beta-D) mannosyltransferase 2

Details for RP23-255P20.5 - dolichol-phosphate (beta-D) mannosyltransferase 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 13481

Tuberculist Genomic Region

140780 BMP2 inducible kinase

Details for - - BMP2 inducible kinase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 140780

Tuberculist Genomic Region

14710 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2

Details for RP23-151M22.5 - guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14710

Tuberculist Genomic Region

15019 histocompatibility 2, Q region locus 8

Details for - - histocompatibility 2, Q region locus 8

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15019

Tuberculist Genomic Region

16633 killer cell lectin-like receptor, subfamily A, member 2

Details for - - killer cell lectin-like receptor, subfamily A, member 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16633

Tuberculist Genomic Region

17261 myocyte enhancer factor 2D

Details for - - myocyte enhancer factor 2D

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17261

Tuberculist Genomic Region

17304 milk fat globule-EGF factor 8 protein

Details for - - milk fat globule-EGF factor 8 protein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17304

Tuberculist Genomic Region

20612 sialic acid binding Ig-like lectin 1, sialoadhesin

Details for RP23-228H14.5 - sialic acid binding Ig-like lectin 1, sialoadhesin

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20612

Tuberculist Genomic Region

227696 phytanoyl-CoA dioxygenase domain containing 1

Details for RP23-395P6.1 - phytanoyl-CoA dioxygenase domain containing 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 227696

Tuberculist Genomic Region

227700 SH3-domain GRB2-like endophilin B2

Details for RP23-395P6.5 - SH3-domain GRB2-like endophilin B2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 227700

Tuberculist Genomic Region

234779 phospholipase C, gamma 2

Details for - - phospholipase C, gamma 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 234779

Tuberculist Genomic Region

26970 phospholipase A2, group IIE

Details for RP23-352K10.7 - phospholipase A2, group IIE

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 26970

Tuberculist Genomic Region

269999 ORAI calcium release-activated calcium modulator 3

Details for - - ORAI calcium release-activated calcium modulator 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 269999

Tuberculist Genomic Region

27355 phosphatase domain containing, paladin 1

Details for - - phosphatase domain containing, paladin 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 27355

Tuberculist Genomic Region

320832 signal-regulatory protein beta 1A

Details for - - signal-regulatory protein beta 1A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 320832

Tuberculist Genomic Region

50706 periostin, osteoblast specific factor

Details for - - periostin, osteoblast specific factor

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 50706

Tuberculist Genomic Region

56312 nuclear protein transcription regulator 1

Details for - - nuclear protein transcription regulator 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 56312

Tuberculist Genomic Region

67803 LIM domain containing 2

Details for RP23-81G14.8 - LIM domain containing 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67803

Tuberculist Genomic Region

68165 ferredoxin 1-like

Details for - - ferredoxin 1-like

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68165

Tuberculist Genomic Region

69156 catechol-O-methyltransferase domain containing 1

Details for - - catechol-O-methyltransferase domain containing 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 69156

Tuberculist Genomic Region

75406 NADH dehydrogenase (ubiquinone) Fe-S protein 7

Details for - - NADH dehydrogenase (ubiquinone) Fe-S protein 7

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 75406

Tuberculist Genomic Region

14109 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)

Details for - - Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14109

Tuberculist Genomic Region

14744 G-protein coupled receptor 65

Details for - - G-protein coupled receptor 65

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14744

Tuberculist Genomic Region

170706 transmembrane protein 37

Details for - - transmembrane protein 37

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 170706

Tuberculist Genomic Region

20317 serine (or cysteine) peptidase inhibitor, clade F, member 1

Details for RP23-384C18.1 - serine (or cysteine) peptidase inhibitor, clade F, member 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20317

Tuberculist Genomic Region

21826 thrombospondin 2

Details for - - thrombospondin 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 21826

Tuberculist Genomic Region

227522 ribonuclease P/MRP 38 subunit

Details for RP23-167G19.2 - ribonuclease P/MRP 38 subunit

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 227522

Tuberculist Genomic Region

27369 deoxyguanosine kinase

Details for - - deoxyguanosine kinase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 27369

Tuberculist Genomic Region

320634 oculocerebrorenal syndrome of Lowe

Details for RP23-455F14.2 - oculocerebrorenal syndrome of Lowe

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 320634

Tuberculist Genomic Region

327942 phosphatidylinositol glycan anchor biosynthesis, class L

Details for RP23-234K24.2 - phosphatidylinositol glycan anchor biosynthesis, class L

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 327942

Tuberculist Genomic Region

66990 transmembrane protein 134

Details for - - transmembrane protein 134

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66990

Tuberculist Genomic Region

68724 ADP-ribosylation factor-like 8A

Details for - - ADP-ribosylation factor-like 8A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68724

Tuberculist Genomic Region

71998 solute carrier family 25, member 35

Details for RP23-396M19.7 - solute carrier family 25, member 35

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 71998

Tuberculist Genomic Region

74202 filamin binding LIM protein 1

Details for RP23-291H3.1 - filamin binding LIM protein 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 74202

Tuberculist Genomic Region

76916 translocase of inner mitochondrial membrane domain containing 1

Details for - - translocase of inner mitochondrial membrane domain containing 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 76916

Tuberculist Genomic Region

223453 death-associated protein

Details for - - death-associated protein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 223453

Tuberculist Genomic Region

223593 RIKEN cDNA E430025E21 gene

Details for - - RIKEN cDNA E430025E21 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 223593

Tuberculist Genomic Region

69162 Sec31 homolog A (S. cerevisiae)

Details for - - Sec31 homolog A (S. cerevisiae)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 69162

Tuberculist Genomic Region

TFBS DB TF

TFs percTargets pValue
V_LMAF_Q2_M01139 0.422222 0.00000523

GO Terms

Displaying 1 - 1 of 1
GO Terms
NA

Upstream MEME Motif

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif2 E-Value Motif2 Consensus Motif2 Matches
0.0000066 YTTNCTKTSTCT V$SOX12_04_M02900, Sox12.2 6000 AAAAAMAAATR NA

Upstream Weeder Motif

Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
0.96 CGCGTC NA 1.02 CCGAGTCC NA

3p UTR Weeder

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
0.52 CNCCTC NA NA 0.69 GGCTCNNC NA NA

3p UTR PITA

miRNAs percTargets pValue
NA

3p UTR TargetScan

miRNAs percTargets pValue
NA

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