New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 2073987165 (0.880)2 (0.010) 2/178 30.9 0.01 coding (288/903 nt) RCAP_rcc01917 hypothetical protein
?NC_014034 2074009 = 154 (0.730)coding (266/903 nt) RCAP_rcc01917 hypothetical protein
Rejected: Position hash score below cutoff.

CGGGGCTCAGATCCCAGATCGCCTGATGGCGCGCGGTGATCAGCGGCACCAGCCCCGGACCCGCCACCGGCGTCTCGGGCGTGACGATCAGCAGCCCCGGCAGCGCCCGC....................................................................................................  >  NC_014034/2073878‑2073987
...................................................................................................GCAGCGCCCGCCGCCGGATCTCTTCGGGCAGATCGGGGACAAAGACCGGACCGCGGCTGCACAGCCACAGCCCGCCCCGCCCCAGCACCTGCGCCAGACCAATCCGCCGCC  >  NC_014034/2074009‑2074108
                                                                                                                                                                                                                  
                                            GGCACCAGCCCCGGACCCGCCACCGGCGTCTCGGGCGTGACGATCAGCAGCCCCGGCAGCGCCCGCCGCCGGATCTCTTCGGGCAGATCGGGGACAAAGAC                                                                   <  1:154723/101‑1 (MQ=255)
                                               ACCAGCCCCGGACCCGCCACCGGCGTCTCGGGCGTGACGATCAGCAGCCCCGGCAGCGCCCGCCGCCGGATCTCTTCGGGCAGATCGGGGACAAAGACCGG                                                                <  2:2542663/101‑1 (MQ=255)
                                                                                                                                                                                                                  
CGGGGCTCAGATCCCAGATCGCCTGATGGCGCGCGGTGATCAGCGGCACCAGCCCCGGACCCGCCACCGGCGTCTCGGGCGTGACGATCAGCAGCCCCGGCAGCGCCCGC....................................................................................................  >  NC_014034/2073878‑2073987
...................................................................................................GCAGCGCCCGCCGCCGGATCTCTTCGGGCAGATCGGGGACAAAGACCGGACCGCGGCTGCACAGCCACAGCCCGCCCCGCCCCAGCACCTGCGCCAGACCAATCCGCCGCC  >  NC_014034/2074009‑2074108

Base quality scores:  ATCG  < 3 ≤  ATCG  < 21 ≤  ATCG  < 31 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG