BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 1224228	154 (1.020)	13 (0.090)	7/142	22.3	0.11	intergenic (‑100/+69)	hisF/hisA	imidazole glycerol phosphate synthase subunit HisF/1‑(5‑phosphoribosyl)‑5‑[(5‑ phosphoribosylamino)methylideneamino] imidazole‑4‑carboxamide isomerase
*	?	NC_014034	1303880 =	50 (0.240)	13 (0.090)	7/142	22.3	0.11	intergenic (+67/+90)	urtE/RCAP_rcc01231	urea ABC transporter ATP‑binding protein UrtE/UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase
Rejected: Position hash score below cutoff.

Only 100 of 121 total aligned reads displayed.


GCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..CCT.C..CGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCC....GCCAAGA..TGGGGG..GC.CCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAG  >  NC_014034/1303782‑1303973


gcgAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCt                                                                                                        >  1:4027713/1‑101 (MQ=37)


gcgAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCCGGATATTTTGGGGAAGAT.AAAC.CCCATCCt                                                                                                        >  1:189023/1‑101 (MQ=25)


 cgAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCtt                                                                                                       <  1:496940/101‑1 (MQ=37)


 cgAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCtt                                                                                                       <  1:589834/101‑1 (MQ=37)


  gAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCCCCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCttt                                                                                                      <  1:4185446/101‑1 (MQ=37)


  gAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCttt                                                                                                      >  2:552071/1‑101 (MQ=37)


  gAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCttt                                                                                                      <  1:4086017/101‑1 (MQ=37)


  gAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCttt                                                                                                      <  2:2491579/101‑1 (MQ=37)


   aaaCCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCCCCCCCGGGGTCTTTGGGGCAAGAT.AAAA.CCCATCCTTTc                                                                                                     >  2:1197013/1‑101 (MQ=25)


   aaaCCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCCCCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTc                                                                                                     >  1:1689346/1‑101 (MQ=37)


   aaaCCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTc                                                                                                     <  1:1297128/101‑1 (MQ=37)


   aaaCCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTc                                                                                                     <  2:3239795/101‑1 (MQ=37)


    aaCCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTTGTGCGACAC.ATAG.CCTATCCtttta                                                                                                    >  2:3446930/1‑99 (MQ=16)


    aaCCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCa                                                                                                    <  2:1541367/101‑1 (MQ=37)


    aaCCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCa                                                                                                    <  2:760984/101‑1 (MQ=37)


    aaCCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCa                                                                                                    <  1:239787/101‑1 (MQ=37)


     aCCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCAc                                                                                                   >  1:3670987/1‑101 (MQ=37)


      cccTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCCCCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCAcc                                                                                                  >  2:3414439/1‑101 (MQ=37)


        cTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCACCtt                                                                                                <  1:3307296/101‑1 (MQ=37)


         tGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGGGCTGCCCCC.C..CGGCTTCCCCTCACCCCCGGGGGATTTTGGGCAAAAT.AAAC.CCCCTCCTTTCACCTTg                                                                                               >  1:2833368/1‑101 (MQ=255)


         tGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCACCTTg                                                                                               <  1:3152708/101‑1 (MQ=37)


         tGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCACCTTg                                                                                               <  1:2484953/101‑1 (MQ=37)


         tGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCACCTTg                                                                                               <  2:574860/101‑1 (MQ=37)


          gcgcgcCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCACCTTGc                                                                                              <  1:985483/101‑1 (MQ=37)


           cgcgcCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCACCTTGcc                                                                                             <  1:2824274/101‑1 (MQ=37)


           cgcgcCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCACCTTGcc                                                                                             <  1:1157503/101‑1 (MQ=37)


            gcgcCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCACCTTGCCg                                                                                            <  1:2066651/101‑1 (MQ=37)


            gcgcCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCACATTGCCg                                                                                            >  2:2559793/1‑101 (MQ=25)


             cgcCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCACCTTGCCGc                                                                                           >  1:1394486/1‑101 (MQ=37)


             cgcCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCACCTTGCCGc                                                                                           <  1:189013/101‑1 (MQ=37)


              gcCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCACCTTGCCGCa                                                                                          <  1:2218808/101‑1 (MQ=37)


                cGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCACCTTTCCGCaaa                                                                                        >  1:2336454/1‑101 (MQ=25)


                cGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCACCTTGCCGCaaa                                                                                        <  2:188985/101‑1 (MQ=37)


                cGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCACCTTGCCGCaaa                                                                                        >  2:2517260/1‑101 (MQ=37)


                 gTGGTCAGCGTTTAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCACCTTGCCGCAAat                                                                                       >  1:215145/1‑101 (MQ=25)


                 gTGGTCAGCGTTTAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCACCTTGCCGCAAat                                                                                       <  1:1375283/101‑1 (MQ=37)


                 gTGGTCAGCGTTTAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGACATTTGGGGCAAGAT.AAAC.CCCATCCTTTCACCTTGCCGCAAat                                                                                       >  1:1809300/1‑101 (MQ=37)


                 gTGGTCAGCGTTTAGACAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCGCCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCACCTTGCCGCAAat                                                                                       <  2:3450563/101‑1 (MQ=25)


                  tGGTCAGCGTTTAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCACCTTTCCGCAAata                                                                                      >  1:971779/1‑101 (MQ=25)


                  tGGTCAGCGTTTAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCACCTTGCCGCAAata                                                                                      <  2:3809424/101‑1 (MQ=37)


                  tGGTCAGCGTTTAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCACCTTGCCGCAAata                                                                                      >  1:1782570/1‑101 (MQ=37)


                  tGGTCACGGTTTAGGCAAGGGCGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCACCTTGCCGCAAata                                                                                      <  2:3863180/101‑1 (MQ=25)


                   ggTCAGCGTTTAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCACCTTGCCGCAAatat                                                                                     <  1:43854/101‑1 (MQ=37)


                    gTCAGCGTTTAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCACCTTGCCGCCAATATc                                                                                    >  1:1998718/1‑101 (MQ=25)


                     tCAGCGTTTAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCACCTTTCCGCAAATATcc                                                                                   >  1:3229772/1‑101 (MQ=25)


                     tCAGCGTTTAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCACCTTGCCGCCAATATcc                                                                                   >  2:2521007/1‑101 (MQ=25)


                     tCAGCGTTTAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCACCTTGCCGCAAATATcc                                                                                   <  1:1964207/101‑1 (MQ=37)


                       aGCGTTTAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCACCTTGCCGCAAATATCCCg                                                                                 <  1:1790366/101‑1 (MQ=37)


                       aGCGTTTAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCACCTTGCCGCAAATATCCCg                                                                                 <  2:54655/101‑1 (MQ=37)


                        gCGTTTAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCACCTTGCCGCAAATATCCCgg                                                                                <  1:1195799/101‑1 (MQ=37)


                        gCGTTTAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCCGGGTATTTGGGGCAAGAT.AAAC.ACCCTCCTTTCACCTTTCCGCAAATATCCCgg                                                                                >  1:221681/1‑101 (MQ=21)


                         cGTTTAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCCGGGTATTTGGGGCAAGAT.AAAC.CCCATCCTTTCACCTTGCCGCAAATATCCCcgg                                                                               >  1:854695/1‑101 (MQ=25)


                          gTTTAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCACCTTGCCGCAAATATCCCgggg                                                                              <  2:1166050/101‑1 (MQ=37)


                          gTTTAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCACCTTGCCGCAAATATCCCgggg                                                                              <  2:3747079/101‑1 (MQ=37)


                            ttAGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCACCTTGCCGCAAATATCCCgggggg                                                                            <  2:1830369/101‑1 (MQ=37)


                              aGGCACGGGGGCGCTG..CCC.CGTCGGCTTCGCCTAACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTg                                                                          <  2:3970946/101‑1 (MQ=25)


                              aGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTg                                                                          >  2:1231411/1‑101 (MQ=25)


                              aGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTg                                                                          <  2:1576070/101‑1 (MQ=37)


                              aGGCAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTg                                                                          <  2:1900789/101‑1 (MQ=37)


                              aGGCAAGGGGGCGCGG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAA.AAAC.CCCATCCCTTCACCTTGCCGCAAATATCCCGGGGGGTg                                                                          <  1:3768221/101‑1 (MQ=25)


                                 cAAGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAAt                                                                       <  2:899839/101‑1 (MQ=37)


                                 acggggggCTCTGC.CCC.C..CGGCTTCG.CTC.CCCCCGGGATATTTGCGGCAAGAT.GAAGGGGCATGATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTgg                                                                    <  1:1386051/98‑1 (MQ=2)


                                  aaGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAAtt                                                                      >  1:1052360/1‑101 (MQ=37)


                                   aGGGGGCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTg                                                                     <  1:509616/101‑1 (MQ=37)


                                    gggggCGCTG..CCC.CCTCGGCTTCGCCTCCCCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCCCCTTGCCGCAAATATCCCGGGGGGTGAATTgg                                                                    <  1:889625/101‑1 (MQ=25)


                                    gggggCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTgg                                                                    >  2:1451759/1‑101 (MQ=37)


                                     ggggCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCACATTGCCGCAAATATCCCGGGGGGTGAATTGgc                                                                   <  1:2559984/101‑1 (MQ=37)


                                      gggCTCTG..CCCCC..CGGCTTCG.CTC.CCCCCGGGATATTTGCGGCAAGATGAAGG.GGCATGATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGgccaaa                                                               >  1:2917400/1‑98 (MQ=2)


                                      gggCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGgcc                                                                  <  1:973644/101‑1 (MQ=37)


                                      gggCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGgcc                                                                  <  1:3642375/101‑1 (MQ=37)


                                      gggCGCTG..CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGgcc                                                                  <  2:2754290/101‑1 (MQ=37)


                                                                                ttGGGGCAAGAT.AAAC.CCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGA..GGGGGGCAGCGCCCCCTTTTCGgggcgg                         >  2:3852948/1‑101 (MQ=14)


                                                                                 tGGGGCAAGAT.AAAC.CCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGA..GGGGGGCAGCGCCCCCTTTTCGgggcggg                        >  2:289724/1‑101 (MQ=14)


                                                                                 tGGGGCAAGAT.AAAC.CCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGA..GGGGGGCAGCGCCCCCTTTTCGgggcggg                        >  1:3730453/1‑101 (MQ=14)


                                                                                    ggCAAGAT.AAAC.CCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGA..GGGGGGCAGCGCCCCCTTTTCGGGGCgggccg                     >  2:1897536/1‑101 (MQ=14)


                                                                                     gCAAGAT.AAAC.CCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGA..GGGGGGCAGCGCCCCCTTTTCGGGGCgggccgc                    >  1:1758879/1‑101 (MQ=14)


                                                                                      cAAGAT.AACC.CCCACCCTTTCCCCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGA..GGGGGGCAGCGCCCCCTTTTCGGGGCgggccgca                   <  2:3598580/101‑1 (MQ=2)


                                                                                      cAAGAT.AAAC.CCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGCGAATTGGCCGAAGGCCAAGAGGGGGGGG..GCGCCCCCTTTTCGGGGCgggccgcc                   >  1:1236477/1‑100 (MQ=12)


                                                                                      cAAAAT.AAAC.CCCATCTTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGA..GGGGGGCAGCGCCCCCTTTTCGGGGCgggccgca                   <  2:1618899/101‑1 (MQ=9)


                                                                                       aaGAT.AAAC.CCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGA..GGGGGGCAGCGCCCCCTTTTCGGGGCgggccgcag                  >  2:902827/1‑101 (MQ=14)


                                                                                        aGAT.AACC.CCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGA..GGGGGGCAGCGCCCCCTTTTCGGGGCgggccgcagg                 <  2:1022336/101‑1 (MQ=9)


                                                                                        aGAT.AAAC.CCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGA..GGGGGGCAGCGCCCCCTTTTCGGGGCgggccgcagg                 >  2:720527/1‑101 (MQ=14)


                                                                                         gAT.AAAC.CCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGA..GGGGGGCAGCGCCCCCTTTTCGGGGCgggccgcaggg                >  1:1561472/1‑101 (MQ=14)


                                                                                          aT.AAAC.CCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGA..GGGGGGCAGCGCCCCCTTTTCGGGGCgggccgcagggc               >  2:4096517/1‑101 (MQ=14)


                                                                                          aT.AAAC.CCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGCGAATTGGCCGAAGGCCAAGA..GGGGGGCAGCGCCCCCTTTTCGGGGCgggccccagggc               >  1:729885/1‑101 (MQ=9)


                                                                                           t.AAAC.CCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGA..GGGGGGCAGCGCCCCCTTTTCGGGGCgggccgcagggcc              >  1:3121861/1‑101 (MQ=14)


                                                                                             aaaC.CCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGA..GGGGGGCAGCGCCCCCTTTTCGGGGCgggccgcagggccg             >  1:277369/1‑101 (MQ=14)


                                                                                             aaaC.CCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGA..GGGGGGCAGCGCCCCCTTTTCGGGGCgggccgcagggccg             >  2:1183999/1‑101 (MQ=14)


                                                                                             aaaC.CCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGA..GGGGGGCAGCGCCCCCTTTTCGGGGCgggccgcagggccg             >  2:2755943/1‑101 (MQ=14)


                                                                                             aaaC.CCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGA..GGGGGGCAGCGCCCCCTTTTCGGGGCgcgccgcgggtata             >  1:4148002/1‑97 (MQ=2)


                                                                                             aaaC.CCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGGGAATTGGCCGAAGGCCAAGA..GGGGGGCAGCGCCCCCTTTTCGGGGCgggccgcagggccg             >  1:2515029/1‑101 (MQ=9)


                                                                                                c.cccATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGA..GGGGGGCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCAc          >  1:343098/1‑101 (MQ=14)


                                                                                                   ccATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGA..GGGGGGCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCAccc        >  1:1041489/1‑101 (MQ=14)


                                                                                                    cATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGA..GGGGGGCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCCCCCt       >  2:1950147/1‑101 (MQ=9)


                                                                                                    cATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGA..GGGGGGCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCt       >  1:1875246/1‑101 (MQ=14)


                                                                                                     aTCCTTTCCCCTTGCCGCAAATGTCCCGGGGGGTGAATTGGCCGAAGGCCAAGA..GGGGGGCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTg      <  1:3391972/101‑1 (MQ=9)


                                                                                                     aTCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGA..GGGGGGCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTg      <  2:873801/101‑1 (MQ=14)


                                                                                                       ccTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGA..GGGGGGCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTc    <  2:1782451/101‑1 (MQ=14)


                                                                                                        cTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGA..GGGGGGCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCa   >  2:2574388/1‑101 (MQ=14)


                                                                                                         tttCACCTTGCCGCAAATATCCCGGGGGGGGAATTGGCCGAAGGCCAAGA..GGGGGGCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAg  >  2:569413/1‑101 (MQ=9)


GCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..CCT.C..CGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAC.CCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCC....GCCAAGA..TGGGGG..GC.CCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAG  >  NC_014034/1303782‑1303973

Base quality scores:


ATCG

< 3 ≤


ATCG

< 15 ≤


ATCG

< 25 ≤


ATCG

< 33 ≤


ATCG

< 41 ≤


ATCG