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[+] Show/hide bicluster #23 rows and columns.
bicluster 23
Desulfovibrio vulgaris Hildenborough
27x363
[+] Show/hide bicluster #23 rows (genes).
bicluster 23 genes
Desulfovibrio vulgaris Hildenborough
27
[+] Show/hide bicluster #23 rows (short gene names).
bicluster 23 short names
Desulfovibrio vulgaris Hildenborough
27
short_name
[+] Show/hide bicluster #23 rows (long gene names).
bicluster 23 long names
Desulfovibrio vulgaris Hildenborough
27
long_name
[+] Show/hide bicluster #23 rows (NCBI RefSeq gene IDs).
bicluster 23 NCBI RefSeq IDs
Desulfovibrio vulgaris Hildenborough
0
[+] Show/hide bicluster #23 gene upstream sequences.
bicluster 23 upstream sequences
Desulfovibrio vulgaris Hildenborough
27
upstream
[+] Show/hide bicluster #23 columns (arrays; conditions).
bicluster 23 arrays
Desulfovibrio vulgaris Hildenborough
363
[+] Show/hide bicluster #23 ratios.
bicluster 23 ratios
Desulfovibrio vulgaris Hildenborough
27x363
GENES X111.1 X111.12 X111.13 X111.2 X111.3 X111.5 X111.6 X111.8 X111.9 X113.1 X115.1 X115.2 X115.3 X116.12 X116.13 X116.3 X116.5 X116.9 X121.11 X121.9 X123.1 X123.11 X123.16 X123.3 X123.5 X123.9 X1258.1 X1258.109 X1258.115 X1258.116 X1258.118 X1258.12 X1258.120 X1258.14 X1258.17 X1258.18 X1258.20 X1258.22 X1258.24 X1258.26 X1258.27 X1258.28 X1258.30 X1258.35 X1258.37 X1258.4 X1258.41 X1258.44 X1258.47 X1258.49 X1258.5 X1258.51 X1258.52 X1258.53 X1258.54 X1258.56 X1258.58 X1258.6 X1258.60 X1258.63 X1258.66 X1258.67 X1258.68 X1258.74 X1258.77 X1258.79 X1258.8 X1258.81 X1258.83 X1258.86 X1258.88 X1258.91 X1258.93 X1258.94 X1258.98 X126.2 X126.6 X126.8 X127.1 X1271.10 X1271.2 X1271.3 X1271.4 X1271.7 X1271.9 X129.2 X1301.1 X1304.1 X1305.1 X1305.3 X1310.1 X1310.2 X1310.3 X1311.1 X132.1 X132.2 X14.1 X14.10 X14.11 X14.12 X14.13 X14.2 X14.3 X14.5 X14.6 X14.7 X1413.14 X1413.15 X1413.17 X1413.4 X1413.7 X1414.1 X1414.5 X1414.6 X1414.7 X1414.8 X1414.9 X1415.2 X1415.4 X1416.1 X1416.3 X1416.5 X1417.12 X1417.4 X1417.8 X16.1 X16.10 X16.11 X16.15 X16.17 X16.18 X16.3 X16.6 X16.8 X1709.12 X1709.13 X1709.14 X1709.15 X1709.4 X1709.5 X1709.6 X1709.8 X1709.9 X1713.2 X1713.3 X1713.4 X1718.2 X1718.3 X1721.10 X1721.11 X1721.12 X1721.13 X1721.15 X1721.16 X1721.17 X1721.2 X1721.3 X1721.4 X1721.5 X1721.6 X1721.7 X1721.8 X1721.9 X1731.1 X1738.1 X175.1 X175.5 X1754.1 X1755.1 X1755.10 X1755.101 X1755.102 X1755.103 X1755.105 X1755.107 X1755.109 X1755.110 X1755.111 X1755.112 X1755.114 X1755.115 X1755.116 X1755.117 X1755.118 X1755.119 X1755.12 X1755.120 X1755.121 X1755.122 X1755.123 X1755.125 X1755.126 X1755.127 X1755.13 X1755.131 X1755.132 X1755.133 X1755.135 X1755.136 X1755.17 X1755.18 X1755.19 X1755.20 X1755.24 X1755.25 X1755.26 X1755.27 X1755.28 X1755.3 X1755.30 X1755.31 X1755.32 X1755.33 X1755.34 X1755.35 X1755.37 X1755.38 X1755.39 X1755.4 X1755.41 X1755.46 X1755.47 X1755.48 X1755.49 X1755.5 X1755.50 X1755.51 X1755.52 X1755.53 X1755.54 X1755.55 X1755.56 X1755.57 X1755.58 X1755.59 X1755.6 X1755.60 X1755.61 X1755.62 X1755.64 X1755.65 X1755.66 X1755.67 X1755.69 X1755.70 X1755.71 X1755.72 X1755.73 X1755.76 X1755.77 X1755.78 X1755.8 X1755.80 X1755.81 X1755.83 X1755.84 X1755.85 X1755.86 X1755.88 X1755.9 X1755.90 X1755.91 X1755.93 X1755.94 X1755.97 X177.4 X177.8 X178.1 X178.2 X19.1 X195.1 X20.1 X20.2 X20.3 X23.2 X23.4 X23.7 X24.1 X24.2 X24.4 X25.1 X27.1 X27.10 X27.11 X27.2 X27.3 X27.9 X28.1 X28.2 X3.2 X3.3 X3.4 X3.5 X3.6 X31.2 X31.3 X32.1 X32.2 X32.3 X33.1 X33.2 X33.3 X33.4 X37.1 X37.3 X37.4 X37.5 X37.7 X37.9 X38.1 X38.2 X38.3 X38.5 X38.6 X380.1 X388.1 X41.1 X41.3 X41.4 X426.1 X435.1 X450.4 X450.5 X56.1 X56.2 X56.3 X57.2 X57.3 X57.4 X59.2 X59.4 X59.5 X59.6 X59.9 X6.1 X6.10 X6.13 X6.15 X6.16 X6.2 X6.9 X60.1 X65.1 X65.4 X71.1 X71.3 X71.4 X71.5 X71.7 X72.5 X72.7 X72.9 X73.1 X73.2 X73.3 X73.5 X74.4 X74.5 X75.1 X86.1 X86.10 X86.2 X88.1
DVU0084 0.059180868727367 0.374840124750811 1.32102448260610 0.53962118407601 0.281901469759669 -0.0203228798020093 0.291136831460653 0.681961871229207 -0.0365581012697272 -0.467362220824092 0.0478957402710982 0.00125375884542927 -1.58297008973059 0.390914289140264 1.32117292230957 0.291379901475085 0.289440907848514 -0.0219878166260490 -0.165372777093154 0.191570158159969 -0.131161136436021 0.0791113110633287 -0.357179139931269 0.347788844289788 0.521622870030333 1.02615086716023 0.734457572361195 1.29893665472984 -0.676714156612301 0.103617481478590 0.888189151259383 0.77053213129687 -0.893332215885343 0.78863620863127 -0.981804134649458 -0.0995119361600302 -1.38289006892034 -1.07434330128864 -0.918858278393217 0.0781395876544915 -0.620867429174489 0.0774395089030035 -0.515781396599549 0.831023165956985 -0.441897389693899 0.595577385795131 0.647633334305591 -0.206908061620213 0.260351921358114 0.171859777684400 -0.00073551873069137 -1.05821532750668 -0.387488671883447 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0.546699902435211 1.70797895710668 1.89051897145572 -0.0328059166652769 1.02308744277988 0.295289432165212 0.189624670296372 -0.0538459457846731 0.652856556371424 0.357532055326267 0.142898634888613 0.187594015152909 -1.31943024019084 -0.721760040126414 1.28388486879803 0.178557562654574 0.637212867122032 -0.42640956213315 -0.143429677927775 0.107737165678904 0.0305294082629428 -0.587872994085805 0.0877771281770635 0.505413254411463 0.459361691906344 0.336642878055522 -0.0247018510543595 0.923000117219274 0.415751962523299 0.0539179390408559 0.696525661635858 0.324576585659745 0.235853247147878 0.243009154152884 0.119760225011046 0.383258511433825 0.102724013625925 0.0850456520835954 0.67757918898427 0.507025680690401 1.55196511776765 0.223408619057883 0.202063917447116 0.86304903198053 -0.0213447016107674 1.05030571790730 0 0.698967494757931 0.814472139020136 0.909215635255838 1.25164933169333 0.331788899752069 1.02075508393911 1.20829566079877 1.20593175852102 0.53893279495117 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0.437743304592305 -0.279495076616799 -0.348137306493683 -0.242761816496978 -0.58322683136721 -0.351586674103055 0.261020456672614 -0.578409962989625 -0.243724819073236 1.52189680033361 -1.34964328633576 -0.607626607625009 -0.565204395869719 -0.524607992467104 -1.24792683502958 -1.40912493101228 0.078148122937441 0.0383625714150283 -0.19309760270867 -0.0508775228145418 -0.294175763289933 1.85973814344502 -1.06642218761225 -0.126540950665533 -0.315667976856023 -1.04877270686972 -1.11151074754111 -0.153712838385625 0.194832677292599 -0.188139716612789 -0.81478720229075 -0.0727057667593611 -0.0311166728397939 0.00421513092964579 -0.750158410896423 -0.831946832011824 0.0938098476108045 0.349835456701374 1.81966870098972 -0.52684201000432 0.140738280554244 0.294315296611194 -0.488874844849409 -0.589433466468528 0.111687554397412 1.98120635279411 -0.214445087563877 NA NA 0.235423328656704 -0.494478443655383 -1.06601954491659 1.26622611057404 -1.22218182395909 -0.992252434277417 -0.270518185549481 -0.175028779803845 -1.85436425508017 -0.351028169718751 -0.000229710441119052 -1.25474392841141 -1.07712469023240 0.155207997298821 0.634960294621883 -0.106991441718600 0.0929298970486373 0.795134156650647 0.761802021236571 -0.559738103789455 0.320396152510785 -0.05399512768666 -0.177472468422212 0.300280717194374 0.251607338426725 0.721448687848387 0.367054462303836 NA NA -0.296643573360113 0.212446903605549 -0.109789530129000 0.148233743380936 -0.642452417555247 -0.397413721556676 -0.881020997978841 -0.404490584419585 1.21935998519613 -0.0758493485795865 1.52921302221837 0.94794912037991 1.73783574796328 0.352754152370843 0.477478757714797 1.01271150750736 0.458153763819361 1.08700186810126 -0.268655267270939 -0.0626675318122362 0.461979797176288 0.689348601973108 -0.357490863308554 0.0522643207442056 0.276978281444474 -0.303679615304567 0.0703867674919089 -0.0929638897407318 0.348219319429850 0.131608496592352 0.267924387280981 0.0217378812753323 0.493096470016082 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DVU0348 0.430954173389298 0.0596872553772352 0.291111462168737 0.316292715238585 0.0652260906436383 -0.00439170048041435 -0.0865251080092947 0.3430647871749 0.00775155020028966 -1.56673004280939 -1.32818943870891 -1.36379324028048 -2.20889730422278 0.0866729467668219 0.314569328133245 0.0436773751267896 0.269128627621556 0.0113501905580324 0.141046900691634 0.327497248541755 0.209262489025792 0.482732978182262 -1.04516631719035 0.209365019651046 0.0300800690159228 0.227858960205323 0.155570506395634 0.741517927013831 -0.452042591843835 0.478702232488955 1.06498107370433 0.45816758009553 -1.43272033409921 0.871406273766157 -1.12087117198131 0.961829559229887 -0.568907367686186 -0.679053115320375 0.217858280757432 0.414428451662532 -0.205980837786061 0.835638020455229 -1.18954487587512 0.98281729294604 0.167177107420751 1.13675083330345 0.779103539852592 -0.91201242875644 -0.422674531736184 1.43811367991865 -0.231262775594293 -1.53502609677123 -0.932865916154746 2.12838307509501 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0.459896591150904 0.404266957400231 -0.114552163853396 0.466662640155802 -0.612270568372119 -0.322508564841742 0.108577597375607 -0.792718212662522 -0.272120848695481 -0.123740228074551 -2.05041720981716 -1.30905416031212 -2.11871074282727 -3.30859903634894 -3.78386408657400 -0.267170953451387 -0.0175428007025168 0.621442538280703 0.431725464077813 -0.147665317839992 -0.214406643815459 0.915614383455566 0.024139680599722 0.457173969940957 -0.129058504250829 -0.353604564986091 0.182004143141725 0.343008677596632 1.54795813611777 0.288123066033552 NA 0.55660928247339 0.663797404197024 1.00122539679219 0.139414300261866 -0.163641605452253 -0.369702454071112 -0.124187292312638 0.129834607768147 1.44124569074346 1.71234723297611 1.48284948873980 1.17125465607822 1.38894632791514 0.195873685238428 0.743018975442915 -0.440327874147075 0.254228443758781 -0.289196914333436 0.3671117168114 0.552889708012509 0.584382701200279 -0.892265112428781 -1.12784293030307 NA 0.216579018361169 -1.33140379570255 0.399423999921887 0.0694040405775103 -1.10745858930327 0.62165355260108 0.796278632254643 -0.90236339943868 0.62385668516637 -0.379448454461399 -1.81907040789213 0.366998412850899 -0.55038257176532 0.0240377499534383 -1.86831900435975 -0.0660868239309081 0.0311299770264435 -0.438584323618537 -0.0879715125137215 -1.74348078651645 -0.530516825281705 1.03427059701460 2.25835215172208 -1.43686803772412 0.305583070439175 -1.04025231652020 -1.05425615671402 -1.19789789641123 -1.63298438943098 -0.228946961094986 -0.0591018922750437 0.384658541092060 -0.368477498058755 -0.176399030550291 -0.22828709427957 -0.171903352572093 -1.40125311226119 1.09133387636397 0.727185748386841 0.136431487665353 1.00540455328982 1.49635261698696 0.744002516766706
[+] Show/hide bicluster #23 motif PSSM #1. bicluster 23 motif PSSM #1 Desulfovibrio vulgaris Hildenborough 13x4
POSITION A C G T
1 0.8 0 0 0.2
2 0.2 0 0 0.8
3 0 0 1 0
4 0 0 0 1
5 0 0 1 0
6 0 1 0 0
7 0 0.2 0 0.8
8 0 0 1 0
9 0 1 0 0
10 0 0 1 0
11 0.2 0 0.8 0
12 0 0 1 0
13 0 0 1 0 [+] Show/hide bicluster #23 motif PSSM #2. bicluster 23 motif PSSM #2 Desulfovibrio vulgaris Hildenborough 15x4
POSITION A C G T
1 0 1 0 0
2 0.555556 0 0.444444 0
3 0 0.777778 0 0.222222
4 0.666667 0.111111 0.111111 0.111111
5 0 0 0.333333 0.666667
6 0 0 1 0
7 0.444444 0.333333 0.222222 0
8 0 1 0 0
9 0.777778 0 0.222222 0
10 0 1 0 0
11 0.666667 0 0.222222 0.111111
12 0 0.222222 0.777778 0
13 0 0.888889 0.111111 0
14 0 1 0 0
15 0.133717 0.032949 0.810727 0.022606 |