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[+] Show/hide bicluster #287 rows and columns.
bicluster 287
Desulfovibrio vulgaris Hildenborough
12x370
[+] Show/hide bicluster #287 rows (genes).
bicluster 287 genes
Desulfovibrio vulgaris Hildenborough
12
[+] Show/hide bicluster #287 rows (short gene names).
bicluster 287 short names
Desulfovibrio vulgaris Hildenborough
12
short_name
[+] Show/hide bicluster #287 rows (long gene names).
bicluster 287 long names
Desulfovibrio vulgaris Hildenborough
12
long_name
[+] Show/hide bicluster #287 rows (NCBI RefSeq gene IDs).
bicluster 287 NCBI RefSeq IDs
Desulfovibrio vulgaris Hildenborough
0
[+] Show/hide bicluster #287 gene upstream sequences.
bicluster 287 upstream sequences
Desulfovibrio vulgaris Hildenborough
12
upstream
[+] Show/hide bicluster #287 columns (arrays; conditions).
bicluster 287 arrays
Desulfovibrio vulgaris Hildenborough
370
[+] Show/hide bicluster #287 ratios.
bicluster 287 ratios
Desulfovibrio vulgaris Hildenborough
12x370
GENES X111.13 X111.2 X111.4 X111.6 X111.7 X111.9 X113.1 X115.1 X115.2 X116.1 X116.10 X116.11 X116.12 X116.13 X116.2 X116.3 X116.4 X116.5 X116.6 X116.8 X116.9 X121.1 X121.11 X121.4 X121.6 X121.7 X121.8 X121.9 X123.1 X123.10 X123.11 X123.15 X123.7 X123.9 X1258.10 X1258.101 X1258.105 X1258.107 X1258.108 X1258.13 X1258.24 X1258.27 X1258.29 X1258.37 X1258.43 X1258.46 X1258.47 X1258.48 X1258.54 X1258.56 X1258.58 X1258.6 X1258.60 X1258.65 X1258.66 X1258.68 X1258.69 X1258.77 X1258.82 X1258.84 X1258.88 X1258.90 X1258.93 X1258.94 X1258.95 X1258.99 X126.1 X126.10 X126.11 X126.12 X126.14 X126.3 X126.4 X126.5 X126.6 X126.8 X127.1 X1271.7 X129.2 X129.3 X129.4 X130.1 X1304.1 X1305.3 X1305.4 X1310.2 X132.1 X14.10 X14.12 X14.13 X14.2 X14.3 X14.4 X14.5 X14.6 X14.7 X14.8 X14.9 X1413.1 X1413.10 X1413.11 X1413.12 X1413.13 X1413.14 X1413.15 X1413.16 X1413.17 X1413.2 X1413.3 X1413.4 X1413.5 X1413.6 X1413.7 X1413.8 X1413.9 X1414.1 X1414.10 X1414.11 X1414.2 X1414.3 X1414.4 X1414.5 X1414.6 X1414.7 X1414.8 X1414.9 X1415.1 X1415.2 X1415.3 X1415.4 X1416.1 X1416.2 X1416.3 X1416.4 X1416.5 X1416.6 X1416.7 X1416.8 X1417.1 X1417.10 X1417.11 X1417.12 X1417.13 X1417.14 X1417.2 X1417.3 X1417.4 X1417.5 X1417.6 X1417.7 X1417.9 X15.1 X16.10 X16.12 X16.16 X16.17 X16.2 X16.4 X16.9 X17.1 X1709.10 X1709.13 X1709.14 X1709.2 X1709.4 X1709.5 X1709.7 X1713.1 X1713.5 X1718.1 X1721.1 X1721.12 X1721.16 X1721.17 X1721.3 X1721.7 X1736.19 X175.1 X175.2 X175.3 X175.4 X175.5 X175.6 X175.7 X175.8 X1755.100 X1755.101 X1755.105 X1755.107 X1755.109 X1755.110 X1755.111 X1755.114 X1755.115 X1755.118 X1755.122 X1755.123 X1755.124 X1755.126 X1755.127 X1755.13 X1755.130 X1755.132 X1755.133 X1755.15 X1755.19 X1755.22 X1755.23 X1755.24 X1755.26 X1755.27 X1755.28 X1755.29 X1755.30 X1755.31 X1755.33 X1755.35 X1755.38 X1755.4 X1755.40 X1755.41 X1755.42 X1755.44 X1755.46 X1755.47 X1755.48 X1755.49 X1755.51 X1755.52 X1755.55 X1755.57 X1755.59 X1755.6 X1755.60 X1755.63 X1755.67 X1755.7 X1755.71 X1755.73 X1755.74 X1755.77 X1755.78 X1755.8 X1755.80 X1755.88 X1755.9 X1755.93 X1755.95 X1755.99 X177.4 X178.1 X178.3 X178.4 X178.5 X178.6 X19.1 X193.1 X193.2 X194.1 X194.2 X199.1 X20.2 X22.1 X22.2 X22.3 X23.6 X23.7 X23.9 X24.1 X24.10 X24.2 X24.3 X24.4 X24.5 X24.6 X24.7 X24.8 X24.9 X25.2 X25.3 X27.10 X27.11 X28.3 X3.1 X3.6 X30.2 X31.2 X31.3 X32.1 X32.3 X33.3 X33.4 X37.1 X37.5 X38.1 X38.2 X38.3 X38.4 X38.5 X38.6 X38.7 X388.1 X41.2 X41.3 X41.4 X41.5 X41.6 X41.7 X42.1 X435.1 X435.2 X435.4 X435.5 X435.6 X440.1 X450.3 X56.1 X56.3 X56.4 X57.1 X57.2 X57.4 X59.2 X59.3 X59.4 X59.5 X59.7 X59.8 X59.9 X6.1 X6.12 X6.13 X6.14 X6.2 X6.5 X6.6 X6.8 X6.9 X60.2 X60.3 X65.1 X65.2 X65.3 X71.2 X71.3 X71.6 X71.7 X72.1 X72.2 X72.3 X72.4 X72.5 X72.6 X72.7 X72.8 X72.9 X73.1 X73.2 X73.3 X73.4 X73.5 X74.3 X74.4 X74.5 X75.1 X86.10 X86.2 X86.4 X86.5 X88.1
DVU0419 0.327428124662701 0.252671417268719 0.668041593826413 0.352137745753644 0.0131247847334202 -0.0836957616602508 0.891191978264728 0.922732493957263 NA -0.217567144640469 0.404557168258556 0.54462325930225 0.138796807751522 0.327876143351515 0.250446772744951 -0.00930642959109695 0.662727165241855 0.0850914171205092 0.290478632993347 0.439995755522184 -0.077837098511226 -0.389571097606917 -0.156419143959508 1.45483656620201 1.69254601313476 -0.40290598765647 1.40268719082401 -0.137553046075692 NA NA NA 1.32238370308410 NA NA -0.233435657619870 2.38035666333892 1.62264273854347 -0.282194921926372 -0.580172460835254 0.270783113476253 0.00908767287959308 0.481532958564997 2.00190755243722 -0.152641388579744 1.74908906144720 0.916565284971928 1.76854234189393 1.61341046376983 -0.0215889391895460 -0.429877948636723 -0.334973377339148 -0.236256012510558 -0.42512029913992 1.75594838206216 -0.354501430560147 -0.243632562977286 0.049657155554567 -0.217525741534054 -0.581206302581994 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0.0291094735935069 -0.391931074672547 NA 0.169276291597583 -0.935747900334932 -0.622959790509062 -0.480638775057804 -0.412898967265875 0.192877298167515 0.0246558588482854 -0.00579087328673104 1.59480378415576 1.83103013473933 2.80371269578013 1.51209644441655 2.07896676691330 2.76434884684567 -0.269634949719264 1.04846198695890 1.76160886646152 2.35906187159196 1.06696361391490 1.99837283947167 2.41978848752271 -0.177065019258020 0.152729879995245 0.385980768528280 -0.343086532325968 0.18185603842268 0.0214919199700373 1.28402094418534 -0.176587338642222 -0.429020224581448 -0.292959729594161 0.83348717114543 -1.07151301196601 -0.0855783052928084 1.11280365024077 1.57468928992002 1.95887921960667 2.32076090837441 0.655929640308119 1.99648807119459 2.40233738714737 0.785688211725021 0.150796293130003 NA -0.154425491692125 -0.354756028766756 -0.00325786831369609 -0.164628020456532 -0.153745492016026 0.953889876426261 -0.059546689193616 3.11063330567456 -3.20466902969424 -1.05347485261912 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DVU0572 -0.0368428288637893 -0.136727426278187 0.200818298788145 0.142715482403775 -0.136509441929018 -0.385746320139032 1.50735222140705 1.45125816119650 1.84910131001912 -0.144923985192372 -0.241837829366915 0.220509841150956 0.516437924796794 -0.0392840798817775 -0.13409598174439 -0.215185464864552 0.194641786073832 -0.212465784434836 0.544234837401826 0.086423412505534 -0.38098974531672 -0.189557105725160 -0.497236195871956 1.12108569160606 1.93644268848908 -0.602734541625121 1.53819136180149 -0.516232967400762 -0.0782476967163698 1.02214164020820 -0.366842474209275 0.87313935022021 0.390328333789301 0.371833534188065 -0.0380942848285424 2.34728673654304 1.18709760547204 -0.0438765150945564 -0.30638794539815 0.0442377959282394 -0.113419601724375 -0.0620013492266848 1.19894344819184 -0.464988407611573 1.69808418461252 0.814300945215337 1.13002218145846 1.45427172968900 -0.428216792758269 -0.163642848387575 0.207211058924541 -0.275351594302481 0.113697510057977 1.35008215849440 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DVU2975 0.139030125824981 0.371178396739574 0.0428989905737062 NA -0.0379355619932342 NA 1.06457101024608 0.476848986437338 1.51210141039582 NA NA -0.175316562621758 NA 0.142303231267231 0.336129602938147 0.170734072940739 0.105694598153482 0.362231340283283 NA 0.178423881863874 -0.0554865954942261 -0.557789730250723 -0.167142322728221 0.9863446425475 0.732245682075209 -0.800793658820246 -0.0873046893210456 -0.844037291486092 0.283285429222506 0.661157923251328 0.135702326563491 1.3681075008357 0.224947723065378 0.426043400529695 -0.297218431065371 2.79803123473213 2.53307164443952 -0.444552215145776 -0.323596478744064 -0.0379459325096094 -0.432098361474123 -0.157982173469700 1.69579450901137 -0.443353923287904 1.81396157094123 0.399438764171298 2.09095380146642 2.51596739551387 -0.00365816413587997 -0.579138077487451 -0.559240892233908 -0.342298923686438 -0.504913592614747 1.83949008864837 -0.396272489253898 -0.375883059627204 -0.648401761924244 -0.0718932141008426 -0.370027979731269 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[+] Show/hide bicluster #287 motif PSSM #1. bicluster 287 motif PSSM #1 Desulfovibrio vulgaris Hildenborough 21x4
POSITION A C G T
1 0.2 0 0.8 0
2 0 0.4 0 0.6
3 0 0 1 0
4 0 0 0.6 0.4
5 0 0.8 0 0.2
6 0 0 0 1
7 0 0 0.2 0.8
8 0.8 0 0 0.2
9 0 0.2 0.2 0.6
10 0 0.8 0.2 0
11 0.2 0.4 0 0.4
12 0.2 0 0.4 0.4
13 1 0 0 0
14 0.4 0.2 0.4 0
15 0.8 0.2 0 0
16 0 0 1 0
17 0.2 0.2 0.6 0
18 0.4 0.4 0 0.2
19 0.6 0.4 0 0
20 0 0 1 0
21 1 0 0 0 [+] Show/hide bicluster #287 motif PSSM #2. bicluster 287 motif PSSM #2 Desulfovibrio vulgaris Hildenborough 19x4
POSITION A C G T
1 0.333333 0 0 0.666667
2 0.333333 0 0 0.666667
3 1 0 0 0
4 0 0 0 1
5 0 0.333333 0.333333 0.333333
6 0.333333 0.333333 0.333333 0
7 0 0 0 1
8 0 0.333333 0 0.666667
9 0.333333 0 0.333333 0.333333
10 0 0 0 1
11 0 0.666667 0.333333 0
12 1 0 0 0
13 0 0 1 0
14 0 0 1 0
15 1 0 0 0
16 0.333333 0 0.666667 0
17 0.333333 0 0.666667 0
18 1 0 0 0
19 1 0 0 0 |