Desulfovibrio vulgaris Hildenborough Module 2 Residual: 0.42 | Syntrophy Portal

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Summary

Residual: 0.42 Score: -54.9965 version: dvh_cmonkey_11_Mar_02

Members

DVU0078 Uncharacterized protein Details for DVU0078 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0078 Tuberculist Genomic Region	DVU1489 Uncharacterized protein Details for DVU1489 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1489 Tuberculist Genomic Region
DVU0382 Uncharacterized protein Details for DVU0382 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0382 Tuberculist Genomic Region	DVU2168 Major head protein Details for DVU2168 - Major head protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2168 Tuberculist Genomic Region
DVU0443 Exonulcease, putative Details for DVU0443 - Exonulcease, putative GO Terms: GO:0004527, GO:0003676 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0443 Tuberculist Genomic Region	DVU2539 Uncharacterized protein Details for DVU2539 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2539 Tuberculist Genomic Region
DVU0920 ATP synthase protein I Details for DVU0920 - ATP synthase protein I GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0920 Tuberculist Genomic Region	DVU2741 High-affinity branched chain amino acid ABC transporter, ATP-binding protein Details for DVU2741 - High-affinity branched chain amino acid ABC transporter, ATP-binding protein GO Terms: GO:0005524, GO:0016887 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2741 Tuberculist Genomic Region
DVU1112 Uncharacterized protein Details for DVU1112 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1112 Tuberculist Genomic Region	DVU2881 Phage-plasmid primase, P4 family Details for DVU2881 - Phage-plasmid primase, P4 family GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2881 Tuberculist Genomic Region
DVU1487 Conserved domain protein Details for DVU1487 - Conserved domain protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1487 Tuberculist Genomic Region

Motifs

Motif 1:

e-value: 120 Motif 2:

e-value: 7800

Module Median Expression Profiles

Module Plots

Regulation

Regulator	Interaction	Influence Weight	Other Influences
DVU1156 Sigma-54 dependent transcriptional regulator, putative/response regulator	up-regulates	0.24	DVU1156
DVU1517 Transcriptional regulator cII, putative	up-regulates	0.12	DVU1517
DVU1754 Uncharacterized protein	up-regulates	0.27	DVU1754
DVU2832 Transcriptional regulator cII, putative	up-regulates	0.19	DVU2832

GO Enrichment

Category: MF
Category	GO ID	GO Term	Annotated	Expected	Significant	p-value
MF	GO:0004527	exonuclease activity	6	0.01	1	0.0093
MF	GO:0004518	nuclease activity	15	0.02	1	0.0233
MF	GO:0016788	hydrolase activity, acting on ester bond...	29	0.05	1	0.0448

Essentiality

Comments

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